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Directional mutation pressure, selective constraints, and genetic equilibria
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/978-3-642-75599-6_1openalex-snapshot
Evolution of DNA Sequence Contributions of Mutational Bias and Selection to the Origin of Chromosomal Compartments
inferredcites →https://doi.org/10.1007/bf00332766openalex-snapshot
DNA sequence analysis of the Serratia marcescens ompA gene: implications for the organisation of an enterobacterial outer membrane protein
inferredcites →https://doi.org/10.1007/bf02099949openalex-snapshot
Silent nucleotide substitutions and G+C content of some mitochondrial and bacterial genes
inferredcites →https://doi.org/10.1007/bf02101193openalex-snapshot
The compositional distribution of coding sequences and DNA molecules in humans and murids
inferredcites →https://doi.org/10.1007/bf02102651openalex-snapshot
The compositional properties of human genes
inferredcites →https://doi.org/10.1007/bf02102652openalex-snapshot
Correlations between the compositional properties of human genes, codon usage, and amino acid composition of proteins
inferredcites →https://doi.org/10.1007/bf02105805openalex-snapshot
Amino acid composition and the evolutionary rates of protein-coding genes
inferredcites →https://doi.org/10.1007/bf02603075openalex-snapshot
On the rate of DNA sequence evolution inDrosophila
inferredcites →https://doi.org/10.1016/0014-5793(87)80660-9openalex-snapshot
Correlation between molecular clock ticking, codon usage, fidelity of DNA repair, chromosome banding and chromatin compactness in germline cells
inferredcites →https://doi.org/10.1016/0022-2836(76)90276-xopenalex-snapshot
Sequence analysis and evolution of sea urchin (Lytechinus pictus and Strongylocentrotus purpuratus) histone H4 messenger RNAs
inferredcites →https://doi.org/10.1016/0022-2836(89)90168-xopenalex-snapshot
Codon recognition patterns as deduced from sequences of the complete set of transfer RNA species in Mycoplasma capricolum
inferredcites →https://doi.org/10.1016/0079-6107(86)90012-xopenalex-snapshot
Local stability of DNA and RNA secondary structure and its relation to biological functions
inferredcites →https://doi.org/10.1016/0168-9525(87)90156-9openalex-snapshot
A glimpse at chromosomal order
inferredcites →https://doi.org/10.1016/s0021-9258(19)86285-3openalex-snapshot
Messenger ribonucleic acid of the lipoprotein of the Escherichia coli outer membrane. II. The complete nucleotide sequence.
inferredcites →https://doi.org/10.1016/s0022-5193(62)80005-8openalex-snapshot
On the evolution of the base composition of DNA
inferredcites →https://doi.org/10.1038/182111a0openalex-snapshot
A Correlation between the Compositions of Deoxyribonucleic and Ribonucleic Acids
inferredcites →https://doi.org/10.1038/1831427a0openalex-snapshot
Heterogeneity in Deoxyribonucleic Acids: I. Dependence on Composition of the Configurational Stability of Deoxyribonucleic Acids
inferredcites →https://doi.org/10.1038/1831429a0openalex-snapshot
Heterogeneity in Deoxyribonucleic Acids: II. Dependence of the Density of Deoxyribonucleic Acids on Guanine–Cytosine Content
inferredcites →https://doi.org/10.1038/217624a0openalex-snapshot
Evolutionary Rate at the Molecular Level
inferredcites →https://doi.org/10.1038/267275a0openalex-snapshot
Preponderance of synonymous changes as evidence for the neutral theory of molecular evolution
inferredcites →https://doi.org/10.1038/scientificamerican1179-98openalex-snapshot
The Neutral Theory of Molecular Evolution
inferredcites →https://doi.org/10.1073/pnas.24.7.253openalex-snapshot
The Distribution of Gene Frequencies Under Irreversible Mutation
inferredcites →https://doi.org/10.1073/pnas.45.10.1480openalex-snapshot
A STATISTICAL ANALYSIS OF DEOXYRIBONUCLEIC ACID DISTRIBUTION IN DENSITY GRADIENT CENTRIFUGATION
inferredcites →https://doi.org/10.1073/pnas.45.7.1039openalex-snapshot
THE RELATIVE HOMOGENEITY OF MICROBIAL DNA
inferredcites →https://doi.org/10.1073/pnas.48.4.582openalex-snapshot
ON THE GENETIC BASIS OF VARIATION AND HETEROGENEITY OF DNA BASE COMPOSITION
inferredcites →https://doi.org/10.1073/pnas.58.5.1895openalex-snapshot
Altered base ratios in the DNA of an Escherichia coli mutator strain.
inferredcites →https://doi.org/10.1073/pnas.74.12.5618openalex-snapshot
Molecular evolution of human and rabbit beta-globin mRNAs.
inferredcites →https://doi.org/10.1073/pnas.76.4.1697openalex-snapshot
Nucleotide sequence of the ribosomal protein gene cluster adjacent to the gene for RNA polymerase subunit beta in Escherichia coli.
inferredcites →https://doi.org/10.1073/pnas.77.12.7328openalex-snapshot
Nucleotide sequence divergence and functional constraint in mRNA evolution.
inferredcites →https://doi.org/10.1073/pnas.84.1.166openalex-snapshot
The guanine and cytosine content of genomic DNA and bacterial evolution.
inferredcites →https://doi.org/10.1073/pnas.85.24.9630openalex-snapshot
Universal rule for coding sequence construction: TA/CG deficiency-TG/CT excess.
inferredcites →https://doi.org/10.1073/pnas.85.4.1124openalex-snapshot
Directional mutation pressure and transfer RNA in choice of the third nucleotide of synonymous two-codon sets.
inferredcites →https://doi.org/10.1073/pnas.85.8.2653openalex-snapshot
Directional mutation pressure and neutral molecular evolution.
inferredcites →https://doi.org/10.1073/pnas.86.21.8452openalex-snapshot
Concordant evolution of coding and noncoding regions of DNA made possible by the universal rule of TA/CG deficiency-TG/CT excess.
inferredcites →https://doi.org/10.1093/nar/16.suppl.r315openalex-snapshot
Codon usage tabulated from the GenBank Genetic Sequence Data
inferredcites →https://doi.org/10.1093/nar/18.6.1465openalex-snapshot
Suppression of the negative effect of minor arginine codons on gene expression; preferential usage of minor codons within the first 25 codons of theEscherichia coligenes
inferredcites →https://doi.org/10.1093/nar/18.6.1565openalex-snapshot
Role of GC-biased mutation pressure on synonymous codon choice inMicrococcus luteusa bacterium with a high genomic GC-content
inferredcites →https://doi.org/10.1093/nar/9.1.213-bopenalex-snapshot
Codon catalog usage is a genome strategy modulated for gene expressivity
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040335openalex-snapshot
Codon usage and tRNA content in unicellular and multicellular organisms.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040343openalex-snapshot
A new method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040352openalex-snapshot
Evolution of influenza virus genes.
inferredcites →https://doi.org/10.1101/sqb.1961.026.01.009openalex-snapshot
Compositional Correlation between Deoxyribonucleic Acid and Protein
inferredcites →https://doi.org/10.1101/sqb.1983.047.01.123openalex-snapshot
Codon Usage and Transfer RNA Contents: Organism-specific Codon-choice Patterns in Reference to the Isoacceptor Contents
inferredcites →https://doi.org/10.1126/science.4001930openalex-snapshot
The Mosaic Genome of Warm-Blooded Vertebrates
inferredcites →https://doi.org/10.1128/mcb.7.8.2914openalex-snapshot
Codon Replacement in the PGK1 Gene of Saccharomyces Cerevisiae: Experimental Approach to study the role of Biased Codon Usage in Gene Expression
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1080/00222933.2024.2388290zenodo-depositor-declared
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inferred← citeshttps://doi.org/10.1002/prot.26294openalex-snapshot
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inferred← citeshttps://doi.org/10.1006/mpev.1998.0555openalex-snapshot
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inferred← citeshttps://doi.org/10.1006/mpev.2000.0782openalex-snapshot
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inferred← citeshttps://doi.org/10.1006/tpbi.2002.1587openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-1-4615-1847-1_5openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-3-7091-0733-1_11openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/bf00028806openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/bf00160266openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/bf00160475openalex-snapshot
Relationship between G + C in silent sites of codons and amino acid composition of human proteins
inferred← citeshttps://doi.org/10.1007/bf00163236openalex-snapshot
Intrastrand parity rules of DNA base composition and usage biases of synonymous codons
inferred← citeshttps://doi.org/10.1007/bf00163805openalex-snapshot
Analysis of directional mutation pressure and nucleotide content in mitochondrial cytochrome b genes
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inferred← citeshttps://doi.org/10.1007/bf00178846openalex-snapshot
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The evolution of the histidine biosynthetic genes in prokaryotes: A common ancestor for the hisA and hisF genes
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Silent substitutions in mammalian genomes and their evolutionary implications
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Analysis of nucleotide substitutions and amino acid conservation in theDrosophila Adh genomic region
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A relationship between GC content and coding-sequence length
inferred← citeshttps://doi.org/10.1007/bf02407349openalex-snapshot
Directional mutation pressure, mutator mutations, and dynamics of molecular evolution
inferred← citeshttps://doi.org/10.1007/bf02498637openalex-snapshot
Molecular Evolution of Nitrate Reductase Genes
inferred← citeshttps://doi.org/10.1007/bf02498643openalex-snapshot
Unbiased estimation of symmetrical directional mutation pressure from protein-coding DNA
inferred← citeshttps://doi.org/10.1007/pl00000051openalex-snapshot
The major compositional transitions in the vertebrate genome
inferred← citeshttps://doi.org/10.1007/pl00006158openalex-snapshot
Amelioration of Bacterial Genomes: Rates of Change and Exchange
inferred← citeshttps://doi.org/10.1007/pl00006168openalex-snapshot
Unbiased Estimation of Symmetrical Directional Mutation Pressure from Protein-Coding DNA
inferred← citeshttps://doi.org/10.1007/pl00006186openalex-snapshot
Relationships Between Genomic G+C Content, RNA Secondary Structures, and Optimal Growth Temperature in Prokaryotes
inferred← citeshttps://doi.org/10.1007/pl00006223openalex-snapshot
Mutation Pattern Variation Among Regions of the Primate Genome
inferred← citeshttps://doi.org/10.1007/pl00006362openalex-snapshot
Molecular Characterization of the Principal Symbiotic Bacteria of the Weevil Sitophilus oryzae: A Peculiar G + C Content of an Endocytobiotic DNA
inferred← citeshttps://doi.org/10.1007/pl00006515openalex-snapshot
Compositional Correlation Between Open Reading Frames with Opposite Transcriptional Orientations in Escherichia coli
inferred← citeshttps://doi.org/10.1007/pl00006555openalex-snapshot
Compositional Correlations in the Chicken Genome
inferred← citeshttps://doi.org/10.1007/s00203-023-03688-5openalex-snapshot
Codon usage bias analysis of the gene encoding NAD+-dependent DNA ligase protein of Invertebrate iridescent virus 6
inferred← citeshttps://doi.org/10.1007/s00239-022-10066-0openalex-snapshot
In Memoriam of Giorgio Bernardi and Noboru Sueoka: A Personal View
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Limitations of Compositional Approach to Identifying Horizontally Transferred Genes
inferred← citeshttps://doi.org/10.1007/s002390010237openalex-snapshot
Near Homogeneity of PR2-Bias Fingerprints in the Human Genome and Their Implications in Phylogenetic Analyses
inferred← citeshttps://doi.org/10.1007/s00284-006-0095-5openalex-snapshot
Mutations Stabilize Small Subunit Ribosomal RNA in Desiccation-Tolerant Cyanobacteria Nostoc
inferred← citeshttps://doi.org/10.1007/s00438-003-0937-9openalex-snapshot
Naturally mosaic operons for secondary metabolite biosynthesis: variability and putative horizontal transfer of discrete catalytic domains of the epothilone polyketide synthase locus
inferred← citeshttps://doi.org/10.1007/s11262-008-0295-0openalex-snapshot
Analysis of synonymous codon usage in the UL24 gene of duck enteritis virus
inferred← citeshttps://doi.org/10.1016/0022-2836(94)90009-4openalex-snapshot
Wide variations in neighbor-dependent substitution rates
inferred← citeshttps://doi.org/10.1016/0097-8485(93)85008-zopenalex-snapshot
The use of multi-dimensional scaling to investigate similarities between non-random oligonucleotide frequencies in introns and exons
inferred← citeshttps://doi.org/10.1016/b978-012680126-2/50013-xopenalex-snapshot
The Dynamics of Bacterial Genomes
inferred← citeshttps://doi.org/10.1016/j.bbrc.2007.05.043openalex-snapshot
The effects of differential gene expression on coding sequence features: Analysis by one-way ANOVA
inferred← citeshttps://doi.org/10.1016/j.biosystems.2023.104970openalex-snapshot
Consequences of asymmetric mutational pressure for the dynamic of linear B-cell epitopes repertoire of influenza a virus neuraminidase rearrangement
inferred← citeshttps://doi.org/10.1016/j.crvi.2008.11.008openalex-snapshot
ISSCOR: Intragenic, Stochastic Synonymous Codon Occurrence Replacement – a new method for an alignment-free genome sequence analysis
inferred← citeshttps://doi.org/10.1016/j.crvi.2012.01.001openalex-snapshot
Alignment free characterization of the influenza-A hemagglutinin genes by the ISSCOR method
inferred← citeshttps://doi.org/10.1016/j.febslet.2007.11.041openalex-snapshot
Comparative codon and amino acid composition analysis of Tritryps‐conspicuous features of Leishmania major
inferred← citeshttps://doi.org/10.1016/j.gene.2004.02.042openalex-snapshot
Quantifying intrachromosomal GC heterogeneity in prokaryotic genomes
inferred← citeshttps://doi.org/10.1016/j.gene.2006.04.031openalex-snapshot
Revisiting the directional mutation pressure theory: The analysis of a particular genomic structure in Leishmania major
inferred← citeshttps://doi.org/10.1016/j.gene.2008.12.016openalex-snapshot
Codon-pair usage and genome evolution
inferred← citeshttps://doi.org/10.1016/j.gene.2017.12.011openalex-snapshot
Dissimilar substitution rates between two strands of DNA influence codon usage pattern in some human genes
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Identification and molecular evolution of the La and LARP genes in 16 plant species: A focus on the Gossypium hirsutum
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An evolutionary dynamics analysis of the plant DEK gene family reveals the role of BnaA02g08940D in drought tolerance
inferred← citeshttps://doi.org/10.1016/j.jtbi.2004.05.020openalex-snapshot
Transcriptional frequency and cell determination
inferred← citeshttps://doi.org/10.1016/j.jtbi.2014.03.022openalex-snapshot
System analysis of synonymous codon usage biases in archaeal virus genomes
inferred← citeshttps://doi.org/10.1016/j.molbiopara.2018.08.001openalex-snapshot
Whole genome analysis of codon usage in Echinococcus
inferred← citeshttps://doi.org/10.1016/j.virusres.2025.199528openalex-snapshot
Analysis of synonymous codon usage bias of Lassa virus
inferred← citeshttps://doi.org/10.1016/j.ygeno.2018.08.009openalex-snapshot
The optimization of mRNA expression level by its intrinsic properties—Insights from codon usage pattern and structural stability of mRNA
inferred← citeshttps://doi.org/10.1016/j.ygeno.2019.07.023openalex-snapshot
Genetic evolution and codon usage analysis of NKX-2.5 gene governing heart development in some mammals
inferred← citeshttps://doi.org/10.1016/s0003-9365(11)80312-xopenalex-snapshot
Actin Coding Regions: Gene Family Evolution and Use as a Phylogenetic Marker
inferred← citeshttps://doi.org/10.1016/s0022-5193(03)00119-xopenalex-snapshot
Circular codes in archaeal genomes
inferred← citeshttps://doi.org/10.1016/s0097-8485(00)80008-xopenalex-snapshot
A global compositional complexity measure for biological sequences: AT-rich and GC-rich genomes encode less complex proteins
inferred← citeshttps://doi.org/10.1016/s0378-1119(00)00480-7openalex-snapshot
DNA G+C content of the third codon position and codon usage biases of human genes
inferred← citeshttps://doi.org/10.1016/s0378-1119(01)00638-2openalex-snapshot
Within-intron correlation with base composition of adjacent exons in different genomes
inferred← citeshttps://doi.org/10.1016/s0378-1119(01)00673-4openalex-snapshot
Analysis of codon usage diversity of bacterial genes with a self-organizing map (SOM): characterization of horizontally transferred genes with emphasis on the E. coli O157 genome
inferred← citeshttps://doi.org/10.1016/s0378-1119(02)01043-0openalex-snapshot
Isochores, GC 3 and mutation biases in the human genome
inferred← citeshttps://doi.org/10.1016/s0378-1119(02)01046-6openalex-snapshot
Wide intra-genomic G+C heterogeneity in human and chicken is mainly due to strand-symmetric directional mutation pressures: dGTP-oxidation and symmetric cytosine-deamination hypotheses
inferred← citeshttps://doi.org/10.1016/s0378-1119(97)00403-4openalex-snapshot
Influence of genomic G + C content on average amino-acid composition of proteins from 59 bacterial species
inferred← citeshttps://doi.org/10.1016/s0378-1119(99)00258-9openalex-snapshot
Correlations of nucleotide substitution rates and base composition of mammalian coding sequences with protein structure
inferred← citeshttps://doi.org/10.1016/s0378-1119(99)00259-0openalex-snapshot
Different hydrophobicities of orthologous proteins from Xenopus and human
inferred← citeshttps://doi.org/10.1016/s0378-1119(99)00297-8openalex-snapshot
Asymmetric substitution patterns: a review of possible underlying mutational or selective mechanisms
inferred← citeshttps://doi.org/10.1016/s0378-1119(99)00320-0openalex-snapshot
Translation-coupled violation of Parity Rule 2 in human genes is not the cause of heterogeneity of the DNA G+C content of third codon position
inferred← citeshttps://doi.org/10.1016/s0960-9822(99)80361-3openalex-snapshot
Chromosomal location effects on gene sequence evolution in mammals
inferred← citeshttps://doi.org/10.1016/s0966-842x(97)01110-4openalex-snapshot
Selfish operons and speciation by gene transfer
inferred← citeshttps://doi.org/10.1017/cbo9780511541520.002openalex-snapshot
Genomes in Motion: Gene Transfer as a Catalyst for Genome Change
inferred← citeshttps://doi.org/10.1021/ja038217ropenalex-snapshot
Guanosine Distribution and Oxidation Resistance in Eight Eukaryotic Genomes
inferred← citeshttps://doi.org/10.1034/j.1600-0463.2003.1110603.xopenalex-snapshot
The genome ofCampylobacter jejuni: Codon and amino acid usage
inferred← citeshttps://doi.org/10.1038/s41598-020-76014-4openalex-snapshot
Driven progressive evolution of genome sequence complexity in Cyanobacteria
inferred← citeshttps://doi.org/10.1038/s41598-025-95893-zopenalex-snapshot
Strong evidence for the evolution of decreasing compositional heterogeneity in SARS-CoV-2 genomes during the pandemic
inferred← citeshttps://doi.org/10.1073/pnas.0404142101openalex-snapshot
Bayesian Markov chain Monte Carlo sequence analysis reveals varying neutral substitution patterns in mammalian evolution
inferred← citeshttps://doi.org/10.1073/pnas.95.16.9413openalex-snapshot
Molecular archaeology of the Escherichia coli genome
inferred← citeshttps://doi.org/10.1073/pnas.95.8.4458openalex-snapshot
Deleterious mutations destabilize ribosomal RNA in endosymbiotic bacteria
inferred← citeshttps://doi.org/10.1080/10635150120286openalex-snapshot
Catalyzing Bacterial Speciation: Correlating Lateral Transfer with Genetic Headroom
inferred← citeshttps://doi.org/10.1080/106351598260608openalex-snapshot
Can Weighting Improve Bushy Trees? Models of Cytochrome b Evolution and the Molecular Systematics of Pipits and Wagtails (Aves: Motacillidae)
inferred← citeshttps://doi.org/10.1093/abbs/37.1.1openalex-snapshot
Analysis of Synonymous Codon Usage Bias in Chlamydia
inferred← citeshttps://doi.org/10.1093/bib/4.1.43openalex-snapshot
Compositional features of eukaryotic genomes for checking predicted genes
inferred← citeshttps://doi.org/10.1093/bioinformatics/16.10.932openalex-snapshot
Finding pathogenicity islands and gene transfer events in genome data
inferred← citeshttps://doi.org/10.1093/emboj/19.24.6637openalex-snapshot
Evolutionary dynamics of full genome content in Escherichia coli
inferred← citeshttps://doi.org/10.1093/gbe/evp028openalex-snapshot
Nucleotide Substitution Bias within the Genus Drosophila Affects the Pattern of Proteome Evolution
inferred← citeshttps://doi.org/10.1093/genetics/153.1.339openalex-snapshot
Switch in Codon Bias and Increased Rates of Amino Acid Substitution in the Drosophila saltans Species Group
inferred← citeshttps://doi.org/10.1093/genetics/159.1.347openalex-snapshot
Selection at the Amino Acid Level Can Influence Synonymous Codon Usage: Implications for the Study of Codon Adaptation in Plastid Genes
inferred← citeshttps://doi.org/10.1093/molbev/msg022openalex-snapshot
G+C3 Structuring Along the Genome: A Common Feature in Prokaryotes
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Nonhomogeneous Model of Sequence Evolution Indicates Independent Origins of Primary Endosymbionts Within the Enterobacteriales (γ-Proteobacteria)
inferred← citeshttps://doi.org/10.1093/molbev/msv099openalex-snapshot
Relaxing the Molecular Clock to Different Degrees for Different Substitution Types
inferred← citeshttps://doi.org/10.1093/nar/20.20.5289openalex-snapshot
Evolution of codon usage patterns: the extent and nature of divergence betweenCandida albicansandSaccharomyces cerevisiae
inferred← citeshttps://doi.org/10.1093/nar/21.2.179openalex-snapshot
Regional base composition variation along yeast chromosome III: evoluation of chormosome primary structure
inferred← citeshttps://doi.org/10.1093/nar/22.13.2437openalex-snapshot
Codon usage in Caenorhabditis elegans : delineation of translational selection and mutational biases
inferred← citeshttps://doi.org/10.1093/nar/22.17.3620openalex-snapshot
The translational termination signal database (TransTerm) now also includes initiation contexts
inferred← citeshttps://doi.org/10.1093/nar/22.9.1705openalex-snapshot
The unusual nucleotide content of the HIV RNA genome results in a biased amino acid composition of HIV proteins
inferred← citeshttps://doi.org/10.1093/nar/gkp576openalex-snapshot
Detection of genomic islands via segmental genome heterogeneity
inferred← citeshttps://doi.org/10.1093/nar/gkp689openalex-snapshot
The coexistence of the nucleosome positioning code with the genetic code on eukaryotic genomes
inferred← citeshttps://doi.org/10.1093/oxfordjournals.molbev.a004110openalex-snapshot
The Complete Mitochondrial Sequence of Tarsius bancanus: Evidence for an Extensive Nucleotide Compositional Plasticity of Primate Mitochondrial DNA
inferred← citeshttps://doi.org/10.1093/oxfordjournals.molbev.a004136openalex-snapshot
Investigating the Relationship Between Genome Structure, Composition, and Ecology in Prokaryotes
inferred← citeshttps://doi.org/10.1093/oxfordjournals.molbev.a025569openalex-snapshot
Gene transfer is a major factor in bacterial evolution
inferred← citeshttps://doi.org/10.1093/oxfordjournals.molbev.a025898openalex-snapshot
Substitution bias, rapid saturation, and the use of mtDNA for nematode systematics
inferred← citeshttps://doi.org/10.1093/oxfordjournals.molbev.a039994openalex-snapshot
The vertebrate genome: isochores and evolution.
inferred← citeshttps://doi.org/10.1093/oxfordjournals.molbev.a040018openalex-snapshot
Evolution of Base Composition in T-DNA Genes from Agrobacterium
inferred← citeshttps://doi.org/10.1093/oxfordjournals.molbev.a040095openalex-snapshot
DNA mismatch repair and synonymous codon evolution in mammals.
inferred← citeshttps://doi.org/10.1093/oxfordjournals.molbev.a040159openalex-snapshot
Evolution of codon usage and base contents in kinetoplastid protozoans.
inferred← citeshttps://doi.org/10.1099/0022-1317-77-7-1563openalex-snapshot
Location, DNA sequence and transcriptional analysis of the DNA polymerase gene of orf virus
inferred← citeshttps://doi.org/10.1099/00221287-147-3-599openalex-snapshot
Molecular evolution of the GDP-mannose pathway genes (manB and manC) in Salmonella enterica The GenBank accession numbers for the sequences reported in this paper are AY012160–AY012201.
inferred← citeshttps://doi.org/10.1101/2020.01.29.924464openalex-snapshot
Tracking evolutionary trends towards increasing complexity: a case study in Cyanobacteria
inferred← citeshttps://doi.org/10.1101/2021.11.06.467547openalex-snapshot
Adaptive trends of sequence compositional complexity over pandemic time in the SARS-CoV-2 coronavirus
inferred← citeshttps://doi.org/10.1101/gad.1543107openalex-snapshot
Silencing of xenogeneic DNA by H-NS—facilitation of lateral gene transfer in bacteria by a defense system that recognizes foreign DNA
inferred← citeshttps://doi.org/10.1101/gr.8.12.1233openalex-snapshot
Models of Molecular Evolution and Phylogeny: Table 1.
inferred← citeshttps://doi.org/10.1103/physreve.84.042902openalex-snapshot
Intermittency as a universal characteristic of the complete chromosome DNA sequences of eukaryotes: From protozoa to human genomes
inferred← citeshttps://doi.org/10.1109/bmei.2009.5305045openalex-snapshot
Characterization of Codon Usage Bias in the Newly Identified DPV gE Gene
inferred← citeshttps://doi.org/10.1109/bmei.2010.5639419openalex-snapshot
Characterization of codon usage bias in the gI gene of duck enteritis virus
inferred← citeshttps://doi.org/10.1109/bmei.2012.6513098openalex-snapshot
Analysis of synonymous codon usage in the outer membrane efflux protein gene of Riemerella anatipestifer
inferred← citeshttps://doi.org/10.1109/bmei.2012.6513118openalex-snapshot
Analysis of synonymous codon usage in the mfs_1 gene of Riemerella anatipestifer
inferred← citeshttps://doi.org/10.1109/icbbe.2010.5515888openalex-snapshot
Synonymous Codon Usage Bias in the UL47 Gene of Duck Enteritis Virus
inferred← citeshttps://doi.org/10.1109/icbbe.2010.5515899openalex-snapshot
Molecular Cloning and Characterization of the UL10 Gene from Duck Enteritis Virus
inferred← citeshttps://doi.org/10.1109/icbbe.2010.5516889openalex-snapshot
Analysis of Synonymous Codon Usage in the Capsid Gene UL38 of Duck Enteritis Virus
inferred← citeshttps://doi.org/10.1111/j.0014-3820.2002.tb01333.xopenalex-snapshot
THE EVOLUTION OF THE VERTEBRATE ?-GLOBIN GENE PROMOTER
inferred← citeshttps://doi.org/10.1128/9781555817640.ch2openalex-snapshot
The Dynamic Bacterial Genome
inferred← citeshttps://doi.org/10.1128/9781555818180.ch15openalex-snapshot
Genomic Flux: Genome Evolution by Gene Loss and Acquisition
inferred← citeshttps://doi.org/10.1128/mbio.00766-20openalex-snapshot
Codon Usage Optimization in the Prokaryotic Tree of Life: How Synonymous Codons Are Differentially Selected in Sequence Domains with Different Expression Levels and Degrees of Conservation
inferred← citeshttps://doi.org/10.1128/mmbr.63.1.106-127.1999openalex-snapshot
Prochlorococcus , a Marine Photosynthetic Prokaryote of Global Significance
inferred← citeshttps://doi.org/10.1155/2022/8857584openalex-snapshot
Application of the Improved Grey Wolf Algorithm in Spacecraft Maneuvering Path Planning
inferred← citeshttps://doi.org/10.1159/000081699openalex-snapshot
Horizontal and Vertical Gene Transfer: The Life History of Pathogens
inferred← citeshttps://doi.org/10.1186/1471-2148-4-19openalex-snapshot
Quantitative relationship between synonymous codon usage bias and GC composition across unicellular genomes
inferred← citeshttps://doi.org/10.1186/1742-4682-5-16openalex-snapshot
Does codon bias have an evolutionary origin?
inferred← citeshttps://doi.org/10.1186/gb-2001-2-4-research0010openalex-snapshot
A simple model based on mutation and selection explains trends in codon and amino-acid usage and GC composition within and across genomes
inferred← citeshttps://doi.org/10.1186/gb-2006-7-8-r75openalex-snapshot
Codon usage patterns in Nematoda: analysis based on over 25 million codons in thirty-two species
inferred← citeshttps://doi.org/10.1266/ggs.76.209openalex-snapshot
A statistical analysis of nucleotide substitutions in the Drosophila Adh region reflects irregularities in molecular clocks.
inferred← citeshttps://doi.org/10.1371/journal.pone.0003343openalex-snapshot
Adaptive Threonine Increase in Transmembrane Regions of Mitochondrial Proteins in Higher Primates
inferred← citeshttps://doi.org/10.1371/journal.pone.0009989openalex-snapshot
A Benchmark of Parametric Methods for Horizontal Transfers Detection
inferred← citeshttps://doi.org/10.1371/journal.pone.0100558openalex-snapshot
The Complete Nucleotide Sequence of the Mitochondrial Genome of Bactrocera minax (Diptera: Tephritidae)
inferred← citeshttps://doi.org/10.1645/0022-3395(2000)086[0380:potana]2.0.co;2openalex-snapshot
PHYLOGENY OF THE ASCARIDOIDEA (NEMATODA: ASCARIDIDA) BASED ON THREE GENES AND MORPHOLOGY: HYPOTHESES OF STRUCTURAL AND SEQUENCE EVOLUTION
inferred← citeshttps://doi.org/10.18388/abp.2014_1862openalex-snapshot
Mapping of the influenza A hemagglutinin serotypes evolution by the ISSCOR method.
inferred← citeshttps://doi.org/10.2165/00822942-200403010-00005openalex-snapshot
Representation of mutation pressure and selection pressure by PAM matrices
inferred← citeshttps://doi.org/10.2165/00822942-200403040-00003openalex-snapshot
Genomic Conflict Settled in Favour of the Species Rather Than the Gene at Extreme GC Percentage Values
inferred← citeshttps://doi.org/10.2172/770188openalex-snapshot
GRAIL-genQuest: A comprehensive computational system for DNA sequence analysis. Final report, DOE SBIR Phase II
inferred← citeshttps://doi.org/10.3184/175815509x12473915395956openalex-snapshot
Comparative Analysis of Codon Usage and tRNA in Mitochondrial Genomes of Gallus Gallus
inferred← citeshttps://doi.org/10.3389/fpls.2021.714305openalex-snapshot
Insights Into the Molecular Evolution of AT-Hook Motif Nuclear Localization Genes in Brassica napus
inferred← citeshttps://doi.org/10.3389/fpls.2022.958964openalex-snapshot
Molecular evolutionary analysis of the SHI/STY gene family in land plants: A focus on the Brassica species
inferred← citeshttps://doi.org/10.3390/biology10111078openalex-snapshot
Analysis of Codon Usage of Speech Gene FoxP2 among Animals
inferred← citeshttps://doi.org/10.4028/www.scientific.net/amr.204-210.649openalex-snapshot
Characterization of Codon Usage Bias in the UL55 Gene of Duck Enteritis Virus
inferred← citeshttps://doi.org/10.4028/www.scientific.net/amr.641-642.597openalex-snapshot
Analysis of Synonymous Codon Usage Bias in D15 Gene Encoded Surface Antigen of Riemerella Anatipestifer
inferred← citeshttps://doi.org/10.4028/www.scientific.net/amr.641-642.654openalex-snapshot
Characterization of Codon Usage Bias in the RA Ragb/SusD Gene
inferred← citeshttps://doi.org/10.4236/jbise.2013.66078openalex-snapshot
Systematic analysis of diabetes- and glucose metabolism-related proteins and its application to Alzheimer’s disease
inferred← citeshttps://doi.org/10.48550/arxiv.0807.3901openalex-snapshot
Studies on the Origin and Evolution of Codon Bias
inferred← citeshttps://doi.org/10.5897/ajb2013.13230openalex-snapshot
Evaluating codon bias perspective in barbiturase gene using multivariate analysis
inferred← citeshttps://doi.org/10.7124/bc.0007b4openalex-snapshot
Comparative analysis of nucleotide composition skew in exons and introns of human genes
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