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Extrachromosomal ribosomal DNA of Didymium iridis: sequence analysis of the large subunit ribosomal RNA gene and sub-telomeric region

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/j.1460-2075.1987.tb04859.xopenalex-snapshot

Multiple spacer sequences in the nuclear large subunit ribosomal RNA gene of Crithidia fasciculata

inferredcites →https://doi.org/10.1007/bf00317925openalex-snapshot

Structure and evolution of myxomycete nuclear group I introns: a model for horizontal transfer by intron homing

inferredcites →https://doi.org/10.1007/bf00376747openalex-snapshot

Nucleotide sequence of the Physarum polycephalum small subunit ribosomal RNA as inferred from the gene sequence: secondary structure and evolutionary implications

inferredcites →https://doi.org/10.1007/bf02106180openalex-snapshot

Dinoflagellates in evolution. A molecular phylogenetic analysis of large subunit ribosomal RNA

inferredcites →https://doi.org/10.1007/bf02111283openalex-snapshot

Evolution in bacteria: Evidence for a universal substitution rate in cellular genomes

inferredcites →https://doi.org/10.1007/bf02603076openalex-snapshot

Sequence and secondary structure of the central domain ofDrosophila 26S rRNA: A universal model for the central domain of the large rRNA containing the region in which the central break may happen

inferredcites →https://doi.org/10.1007/bf02603119openalex-snapshot

On the evolution of ribosomal RNA

inferredcites →https://doi.org/10.1016/0014-4827(73)90262-0openalex-snapshot

A characterization of ribonucleic acid in the myxomycete Physarum polycephalum

inferredcites →https://doi.org/10.1016/0022-2836(82)90289-3openalex-snapshot

Structure of the central spacer region of extrachromosomal ribosomal DNA in Physarum polycephalum

inferredcites →https://doi.org/10.1016/0022-2836(87)90514-6openalex-snapshot

Precise identification of cleavage sites involved in the unusual processing of trypanosome ribosomal RNA

inferredcites →https://doi.org/10.1016/0079-6107(88)90011-9openalex-snapshot

Evolutionary conservation of structure and function of high molecular weight ribosomal RNA

inferredcites →https://doi.org/10.1016/0092-8674(80)90564-4openalex-snapshot

A family of inverted repeat sequences and specific single-strand gaps at the termini of the Physarum rDNA palindrome

inferredcites →https://doi.org/10.1016/0092-8674(83)90310-0openalex-snapshot

Sequence and hairpin structure of an inverted repeat series at termini of the physarum extrachromosomal rDNA molecule

inferredcites →https://doi.org/10.1016/0092-8674(90)90592-3openalex-snapshot

The excision of intervening sequences from salmonella 23S ribosomal RNA

inferredcites →https://doi.org/10.1016/0092-8674(91)90525-4openalex-snapshot

Short inverted repeats at a free end signal large palindromic DNA formation in tetrahymena

inferredcites →https://doi.org/10.1016/0168-9525(87)90257-5openalex-snapshot

Molecular time scale for evolution

inferredcites →https://doi.org/10.1016/0300-9084(87)90267-7openalex-snapshot

Comparisons of large subunit rRNAs reveal some eukaryote-specific elements of secondary structure

inferredcites →https://doi.org/10.1016/0303-2647(88)90016-0openalex-snapshot

The secondary structure of large-subunit rRNA divergent domains, a marker for protist evolution

inferredcites →https://doi.org/10.1016/0378-1119(81)90086-xopenalex-snapshot

Structure around the 3' terminus of the 26S ribosomal RNA gene of Physarum polycephalum

inferredcites →https://doi.org/10.1016/0378-1119(85)90280-xopenalex-snapshot

The complete nucleotide sequence of a rice 25S β rRNA gene

inferredcites →https://doi.org/10.1016/0378-1119(85)90314-2openalex-snapshot

Nucleotide sequence of the central non-transcribed spacer region of Physarum polycephalum rDNA

inferredcites →https://doi.org/10.1016/b978-0-12-049601-3.50006-7openalex-snapshot

Morphology, Taxonomy, and Phylogeny

inferredcites →https://doi.org/10.1016/s0022-2836(05)80096-8openalex-snapshot

Sixteen discrete RNA components in the cytoplasmic ribosome of Euglena gracilis

inferredcites →https://doi.org/10.1016/s0022-2836(05)80097-xopenalex-snapshot

Fourteen internal transcribed spacers in the circular ribosomal DNA of Euglena gracilis

inferredcites →https://doi.org/10.1073/pnas.80.11.3163openalex-snapshot

Complete nucleotide sequence of the 26S rRNA gene of Physarum polycephalum: its significance in gene evolution.

inferredcites →https://doi.org/10.1073/pnas.82.22.7666openalex-snapshot

Variation among human 28S ribosomal RNA genes.

inferredcites →https://doi.org/10.1073/pnas.85.10.3474openalex-snapshot

Partial phylogeny of the unicellular eukaryotes based on rapid sequencing of a portion of 28S ribosomal RNA.

inferredcites →https://doi.org/10.1093/nar/11.22.7795openalex-snapshot

Sequence analysis of 28S ribosomal DNA from the amphibianXenopus laevis

inferredcites →https://doi.org/10.1093/nar/12.8.3563openalex-snapshot

The complete nucleotide sequence of mouse 28S rRNA gene. Implications for the process of size increase of the large subunit rRNA In higher eukaryotes

inferredcites →https://doi.org/10.1093/nar/15.22.9143openalex-snapshot

Identification of the telomeric sequence of the acellular slime moldsDidymium iridisandPhysarum potycephalum

inferredcites →https://doi.org/10.1093/nar/16.suppl.r175openalex-snapshot

A Compilation of large subunit RNA sequences presented in a structural format

inferredcites →https://doi.org/10.1093/nar/18.23.7063openalex-snapshot

rRNA genes from the lower chordateHerdmania momus: structural similarity with higher eukaryotes

inferredcites →https://doi.org/10.1093/nar/6.4.1433openalex-snapshot

Unique sequence arrangement of ribosomal genes in the palindromic rDNA molecule of Physarum polycephalum

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040362openalex-snapshot

The small-subunit ribosomal RNA gene sequences from the hypotrichous ciliates Oxytricha nova and Stylonychia pustulata.

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040536openalex-snapshot

Molecular phylogeny of the kingdoms Animalia, Plantae, and Fungi.

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040628openalex-snapshot

Tetrapod phylogeny inferred from 18S and 28S ribosomal RNA sequences and a review of the evidence for amniote relationships.

inferredcites →https://doi.org/10.1093/sysbio/31.4.523openalex-snapshot

Five Kingdoms: An Illustrated Guide to the Phyla of Life on Earth

inferredcites →https://doi.org/10.1101/gad.5.1.49openalex-snapshot

A yeast protein that binds to vertebrate telomeres and conserved yeast telomeric junctions.

inferredcites →https://doi.org/10.1111/j.1432-1033.1990.tb15393.xopenalex-snapshot

Evolution of large‐subunit rRNA structure

inferredcites →https://doi.org/10.1128/mcb.11.6.3326openalex-snapshot

Telomeric Location of Giardia rDNA Genes

inferredcites →https://doi.org/10.1146/annurev.ge.23.120189.003051openalex-snapshot

STRUCTURE AND FUNCTION OF TELOMERES

inferredcites →https://doi.org/10.2307/1222104openalex-snapshot

Five Kingdoms: An Illustrated Guide to the Phyla of Life on Earth

inferredcites →https://doi.org/10.3109/10425179109039689openalex-snapshot

Strain-dependent sequence heterogeneity in the nuclear group I introns and large subunit ribosomal RNA inPhysarum polycephalum

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Towards a phylogenetic classification of the Myxomycetes

inferred← citeshttps://doi.org/10.1002/1097-0061(200102)18:3<261::aid-yea670>3.0.co;2-wopenalex-snapshot

Large circular and linear rDNA plasmids inCandida albicans

inferred← citeshttps://doi.org/10.1002/9781394276639.refsopenalex-snapshot

References

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Phylogeny of the GenusAgaricusInferred from Restriction Analysis of Enzymatically Amplified Ribosomal DNA

inferred← citeshttps://doi.org/10.1007/bf00317925openalex-snapshot

Structure and evolution of myxomycete nuclear group I introns: a model for horizontal transfer by intron homing

inferred← citeshttps://doi.org/10.1007/bf00326577openalex-snapshot

Identification of group-I introns in the 28s rDNA of the entomopathogenic fungus Beauveria brongniartii

inferred← citeshttps://doi.org/10.1007/s11557-013-0934-2openalex-snapshot

Chromosome numbers in representative myxomycetes: a cytogenetic study

inferred← citeshttps://doi.org/10.1016/0092-8674(94)90511-8openalex-snapshot

An intron in the nuclear ribosomal DNA of Didymium iridis codes for a group I ribozyme and a novel ribozyme that cooperate in self-splicing

inferred← citeshttps://doi.org/10.1016/b978-0-12-805089-7.00003-2openalex-snapshot

The Phylogeny of Myxomycetes

inferred← citeshttps://doi.org/10.1016/b978-0-12-824281-0.00008-7openalex-snapshot

The phylogeny and phylogenetically based classification of myxomycetes

inferred← citeshttps://doi.org/10.1016/j.protis.2019.125681openalex-snapshot

Evidence of Intra-individual SSU Polymorphisms in Dark-spored Myxomycetes (Amoebozoa)

inferred← citeshttps://doi.org/10.1016/j.ympev.2006.11.004openalex-snapshot

Obligatory group I introns with unusual features at positions 1949 and 2449 in nuclear LSU rDNA of Didymiaceae myxomycetes

inferred← citeshttps://doi.org/10.1016/s0168-1656(98)00104-7openalex-snapshot

Group I twintrons: Genetic elements in myxomycete and schizopyrenid amoeboflagellate ribosomal DNAs

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A systematic assessment of Morchella using RFLP analysis of the 28S ribosomal RNA gene

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Myxomycete Reproductive Systems: Additional Information

inferred← citeshttps://doi.org/10.1080/15572536.2003.11833152openalex-snapshot

Patterns of mitochondrial inheritance in the myxogastridDidymium iridis

inferred← citeshttps://doi.org/10.1080/15572536.2004.11833092openalex-snapshot

Primers Are Designed for Amplification and Direct Sequencing of ITS Region of rDNA from Myxomycetes

inferred← citeshttps://doi.org/10.1093/nar/20.23.6429openalex-snapshot

New nucleotide sequence data on the EMBL File Server

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A compilation of large subunit (23S and 23S-like) ribosomal RNA structures: 1993

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Nucleolar introns fromPhysarum flavicomumcontain insertion elements that may explain how mobile group I introns gained their open reading frames

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Ribosomal RNA genes in eukaryotic microorganisms: witnesses of phylogeny?

inferred← citeshttps://doi.org/10.1128/mcb.18.12.7521openalex-snapshot

Insertional Editing of Mitochondrial tRNAs of Physarum polycephalum and Didymium nigripes

inferred← citeshttps://doi.org/10.1134/s0012496624701242openalex-snapshot

The Systematics and Phylogeny of Myxomycetes: Yesterday, Today, and Tomorrow

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Polyphyletic origin of the genus Physarum(Physarales, Myxomycetes) revealed by nuclear rDNA mini-chromosome analysis and group I intron synapomorphy

inferred← citeshttps://doi.org/10.1186/s12860-026-00587-7openalex-snapshot

Telomere-to-telomere characterization of rDNA chromosome in the myxomycete Didymium iridis

inferred← citeshttps://doi.org/10.1186/s13100-022-00280-4openalex-snapshot

Mobile group I introns at nuclear rDNA position L2066 harbor sense and antisense homing endonuclease genes intervened by spliceosomal introns

inferred← citeshttps://doi.org/10.1261/rna.1989310openalex-snapshot

RNA editing of 10 Didymium iridis mitochondrial genes and comparison with the homologous genes in Physarum polycephalum

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The prospects and perspectives of the phylogenetic system of myxomycetes (Myxogastrea)

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Nuclear extrachromosomal DNA of higher plants.

inferred← citeshttps://doi.org/10.31857/s0026364824040018openalex-snapshot

Systematics and Phylogeny of Myxomycetes: Yesterday, Today, Tomorrow

inferred← citeshttps://doi.org/10.6084/m9.figshare.21303116openalex-snapshot

Additional file 1 of Mobile group I introns at nuclear rDNA position L2066 harbor sense and antisense homing endonuclease genes intervened by spliceosomal introns

inferred← citeshttps://doi.org/10.6084/m9.figshare.21303119openalex-snapshot

Additional file 2 of Mobile group I introns at nuclear rDNA position L2066 harbor sense and antisense homing endonuclease genes intervened by spliceosomal introns

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