On the public citation graph
Aligning alignments
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Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1007/978-1-4899-6846-3openalex-snapshot
Introduction to Computational Biology
inferredcites →https://doi.org/10.1007/bf02459503openalex-snapshot
Algorithms for computing evolutionary similarity measures with length independent gap penalties
inferredcites →https://doi.org/10.1007/bf02459948openalex-snapshot
Sequence comparison with concave weighting functions
inferredcites →https://doi.org/10.1016/0022-2836(82)90398-9openalex-snapshot
An improved algorithm for matching biological sequences
inferredcites →https://doi.org/10.1016/0304-3975(89)90101-1openalex-snapshot
Speeding up dynamic programming with applications to molecular biology
inferredcites →https://doi.org/10.1016/s0022-5193(84)80037-5openalex-snapshot
Efficient sequence alignment algorithms
inferredcites →https://doi.org/10.1016/s0022-5193(89)80196-1openalex-snapshot
Gap costs for multiple sequence alignment
inferredcites →https://doi.org/10.1017/cbo9780511574931openalex-snapshot
Algorithms on Strings, Trees and Sequences
inferredcites →https://doi.org/10.1073/pnas.84.13.4355openalex-snapshot
Profile analysis: detection of distantly related proteins.
inferredcites →https://doi.org/10.1073/pnas.86.12.4412openalex-snapshot
A tool for multiple sequence alignment.
inferredcites →https://doi.org/10.1073/pnas.89.22.10915openalex-snapshot
Amino acid substitution matrices from protein blocks.
inferredcites →https://doi.org/10.1089/cmb.1994.1.337openalex-snapshot
On the Complexity of Multiple Sequence Alignment
inferredcites →https://doi.org/10.1089/cmb.1995.2.459openalex-snapshot
Improving the Practical Space and Time Efficiency of the Shortest-Paths Approach to Sum-of-Pairs Multiple Sequence Alignment
inferredcites →https://doi.org/10.1093/bioinformatics/10.4.379openalex-snapshot
Further improvement in methods of group-to-group sequence alignment with generalized profile operations
inferredcites →https://doi.org/10.1093/bioinformatics/9.3.361openalex-snapshot
Optimal alignment between groups of sequences and its application to multiple sequence alignment
inferredcites →https://doi.org/10.1097/00042560-199708150-00013openalex-snapshot
HIV-1 Encodes a Sequence Overlappingenv gp41 With Highly Significant Similarity to Selenium-Dependent Glutathione Peroxidases
inferredcites →https://doi.org/10.1137/0148063openalex-snapshot
The Multiple Sequence Alignment Problem in Biology
inferredcites →https://doi.org/10.1145/267521.267758openalex-snapshot
Progressive multiple alignment with constraints
inferredcites →https://doi.org/10.1145/360825.360861openalex-snapshot
A linear space algorithm for computing maximal common subsequences
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1007/3-540-44888-8_19openalex-snapshot
Alignment between Two Multiple Alignments
inferred← citeshttps://doi.org/10.1007/978-0-387-09760-2_2openalex-snapshot
Practical Multiple Sequence Alignment
inferred← citeshttps://doi.org/10.1007/978-1-59745-398-1_25openalex-snapshot
Protein Multiple Sequence Alignment
inferred← citeshttps://doi.org/10.1007/978-3-540-30219-3_27openalex-snapshot
New Algorithms for Multiple DNA Sequence Alignment
inferred← citeshttps://doi.org/10.1007/s00530-004-0150-7openalex-snapshot
Toward better retrieval and presentation by exploring cross-media correlations
inferred← citeshttps://doi.org/10.1016/j.fss.2004.10.019openalex-snapshot
Averaging fuzzy biopolymers
inferred← citeshttps://doi.org/10.1016/j.ipl.2010.05.024openalex-snapshot
Optimal global alignment of signals by maximization of Pearson correlation
inferred← citeshttps://doi.org/10.1016/s0166-218x(00)00194-3openalex-snapshot
A polyhedral approach to sequence alignment problems
inferred← citeshttps://doi.org/10.1093/bioinformatics/16.9.808openalex-snapshot
An iterative method for faster sum-of-pairs multiple sequence alignment
inferred← citeshttps://doi.org/10.1093/bioinformatics/btm190openalex-snapshot
In search of lost introns
inferred← citeshttps://doi.org/10.1093/bioinformatics/btm226openalex-snapshot
Multiple alignment by aligning alignments
inferred← citeshttps://doi.org/10.1093/hmg/11.6.669openalex-snapshot
Classification of common conserved sequences in mammalian intergenic regions
inferred← citeshttps://doi.org/10.1093/sysbio/syr095openalex-snapshot
SATé-II: Very Fast and Accurate Simultaneous Estimation of Multiple Sequence Alignments and Phylogenetic Trees
inferred← citeshttps://doi.org/10.1109/csb.2004.1332438openalex-snapshot
Multiple RNA structure alignment
inferred← citeshttps://doi.org/10.1109/csb.2005.53openalex-snapshot
TreeRefiner: a tool for refining a multiple alignment on a phylogenetic tree
inferred← citeshttps://doi.org/10.1142/9781860948732_0026openalex-snapshot
MANGO: A NEW APPROACH TO MULTIPLE SEQUENCE ALIGNMENT
inferred← citeshttps://doi.org/10.1145/3233547.3233592openalex-snapshot
Splice-Aware Multiple Sequence Alignment of Protein Isoforms
inferred← citeshttps://doi.org/10.1145/369133.369192openalex-snapshot
Separating repeats in DNA sequence assembly
inferred← citeshttps://doi.org/10.1371/journal.pone.0022594openalex-snapshot
MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons
inferred← citeshttps://doi.org/10.1371/journal.pone.0160043openalex-snapshot
Two Simple and Efficient Algorithms to Compute the SP-Score Objective Function of a Multiple Sequence Alignment
inferred← citeshttps://doi.org/10.1371/journal.pone.0285225openalex-snapshot
Mirage2’s high-quality spliced protein-to-genome mappings produce accurate multiple-sequence alignments of isoforms
inferred← citeshttps://doi.org/10.48550/arxiv.q-bio/0702005openalex-snapshot
In search of lost introns
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