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Determination of the evolutionary relationships in Rattus sensu lato (Rodentia : Muridae) using L1 (LINE-1) amplification events

https://doi.org/10.1007/pl00006247
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1006/jmbi.1994.0095openalex-snapshot
Ancestral, Mammalian-wide Subfamilies of LINE-1 Repetitive Sequences
inferredcites →https://doi.org/10.1006/jmbi.1994.1515openalex-snapshot
The Dynamics of Murine Line-1 Subfamily Amplification
inferredcites →https://doi.org/10.1007/bf00175491openalex-snapshot
Amplification of the ancient murine Lx family of long interspersed repeated DNA occurred during the murine radiation
inferredcites →https://doi.org/10.1007/bf00563229openalex-snapshot
Cytogenetic relationships inRattus, Cremnomys, Millardia, Nesokia andBandicota (Rodentia: Muridae)
inferredcites →https://doi.org/10.1007/bf02407302openalex-snapshot
The evolution of long interspersed repeated DNA (L1, LINE 1) as revealed by the analysis of an ancient rodent L1 DNA family
inferredcites →https://doi.org/10.1016/0022-2836(86)90235-4openalex-snapshot
Conservation throughout mammalia and extensive protein-encoding capacity of the highly repeated DNA long interspersed sequence one
inferredcites →https://doi.org/10.1016/0169-5347(91)90060-bopenalex-snapshot
Animal tissue collections for molecular genetics and systematics
inferredcites →https://doi.org/10.1016/0305-0491(79)90278-5openalex-snapshot
Protein variation and systematics of three subgenera of Malayan rats (Rodentia: Muridae, Genus Rattus Fischer)
inferredcites →https://doi.org/10.1016/0888-7543(87)90003-6openalex-snapshot
Origin of the human L1 elements: Proposed progenitor genes deduced from a consensus DNA sequence
inferredcites →https://doi.org/10.1016/0888-7543(91)90012-4openalex-snapshot
LINE-1 repetitive DNA probes for species-specific cloning from Mus spretus and Mus domesticus genomes
inferredcites →https://doi.org/10.1016/0968-0004(88)90131-4openalex-snapshot
Current protocols in molecular biology
inferredcites →https://doi.org/10.1071/zo9940711openalex-snapshot
Evolution in Some South-East Asian Murinae (Rodentia), as Assessed by Microcomplement Fixation of Albumin, and Their Relationship to Australian Murines
inferredcites →https://doi.org/10.1071/zo9950105openalex-snapshot
Evolution in the Murinae (Rodentia) Assessed by Microcomplement Fixation of Albumin
inferredcites →https://doi.org/10.1073/pnas.74.12.5463openalex-snapshot
DNA sequencing with chain-terminating inhibitors
inferredcites →https://doi.org/10.1073/pnas.87.23.9481openalex-snapshot
Amplification of an ancestral mammalian L1 family of long interspersed repeated DNA occurred just before the murine radiation.
inferredcites →https://doi.org/10.1073/pnas.90.8.3433openalex-snapshot
Molecular evidence that the spiny mouse (Acomys) is more closely related to gerbils (Gerbillinae) than to true mice (Murinae).
inferredcites →https://doi.org/10.1074/jbc.270.43.25301openalex-snapshot
DNA “Fossils” and Phylogenetic Analysis
inferredcites →https://doi.org/10.1093/genetics/146.2.641openalex-snapshot
Recombination Creates Novel L1 (LINE-1) Elements in Rattus norvegicus
inferredcites →https://doi.org/10.1093/nar/11.15.5073openalex-snapshot
Size and structure of the highly repetitive BAM HI element in mice
inferredcites →https://doi.org/10.1093/nar/11.24.8847openalex-snapshot
The L1Md long interspersed repeat family in the mouse: almost all examples are truncated at one end
inferredcites →https://doi.org/10.1093/nar/16.19.9215openalex-snapshot
The structure of the regulatory region of the rat L1 (L1Rn, long interspersed repeated) DNA family of transposable elements
inferredcites →https://doi.org/10.1093/nar/16.2.739openalex-snapshot
The F-type 5′ motif of mouse L1 elements: a major class of L1 termini similar to the A-type in organization but unrelated in sequence
inferredcites →https://doi.org/10.1093/nar/17.1.452openalex-snapshot
A rapid procedure for colony screening using nylon filters
inferredcites →https://doi.org/10.1093/nar/17.21.8543openalex-snapshot
A computer program for choosing optimal oligonudeotides for filter hybridization, sequencing andin vitroamplification of DNA
inferredcites →https://doi.org/10.1093/nar/21.22.5264openalex-snapshot
MUST, a computer package of Management Utilities for Sequences and Trees
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025623openalex-snapshot
Phylogenetic history of LINE-1 among arvicolid rodents
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a039991openalex-snapshot
Use of long sequence alignments to study the evolution and regulation of mammalian globin gene clusters.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040192openalex-snapshot
L1 (LINE-1) retrotransposable elements provide a "fossil" record of the phylogenetic history of murid rodents.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040454openalex-snapshot
The neighbor-joining method: a new method for reconstructing phylogenetic trees.
inferredcites →https://doi.org/10.1111/j.1095-8312.1997.tb01798.xopenalex-snapshot
Systematics of Maxomys Sody, 1936 (Rodentia: Muridae: Murinae): DNA/DNA hybridization studies of some Borneo-Javan species and allied Sundaic and Australo-Papuan genera
inferredcites →https://doi.org/10.1111/j.1096-3642.1947.tb00509.xopenalex-snapshot
Notes on some Asiatic Rodents in the British Museum.
inferredcites →https://doi.org/10.2307/1223169openalex-snapshot
Mammal Species of the World: A Taxonomic and Geographic Reference
inferredcites →https://doi.org/10.2307/1378400openalex-snapshot
Rattus masaretes: A Synonym of Rattus rattus moluccarius
inferredcites →https://doi.org/10.2307/1380101openalex-snapshot
Definition and Contents of the Sundaic Genus Maxomys (Rodentia, Muridae)
inferredcites →https://doi.org/10.2307/2413336openalex-snapshot
Orders and Families of Recent Mammals of the World.
inferredcites →https://doi.org/10.5281/zenodo.13510955openalex-snapshot
Versuch der Rekonstruktion der phylogenetischen Beziehungen zwischen einigen zentralasiatischen Muriden
inferredcites →https://doi.org/10.5281/zenodo.13527281openalex-snapshot
Zur Taxonomie der Gattung Rattus (Rodentia, Muridae)
inferredcites →https://doi.org/10.5281/zenodo.18028696openalex-snapshot
The principles of classification and a classification of mammals
inferredcites →https://doi.org/10.5962/bhl.title.8323openalex-snapshot
Families and Genera of Living Rodents

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.11646/zootaxa.4459.3.2zenodo-depositor-declared
A perspective for resolving the systematics of Rattus, the vertebrates with the most influence on human welfare
inferred← citeshttps://doi.org/10.3897/zookeys.1280.163907zenodo-depositor-declared
Mus (Pyromys) dumbara, a new endemic species of spiny mouse (Mammalia, Rodentia, Muridae) from Sri Lanka
inferred← citeshttps://doi.org/10.1002/jmor.10228openalex-snapshot
The spermatozoon of Eurasian murine rodents: Its morphological diversity and evolution
inferred← citeshttps://doi.org/10.1007/978-1-4614-3449-8_3openalex-snapshot
Checklist of South Asian Mammals
inferred← citeshttps://doi.org/10.1007/978-3-642-20992-5_19openalex-snapshot
Inter- and Intraspecific Genetic Biodiversity in South East Asian Rodents: New Insights for Their Conservation
inferred← citeshttps://doi.org/10.1007/s00239-003-2539-xopenalex-snapshot
Different Rates of LINE-1 (L1) Retrotransposon Amplification and Evolution in New World Monkeys
inferred← citeshttps://doi.org/10.1007/s10530-018-1830-0openalex-snapshot
Phylogeography of the black rat Rattus rattus in India and the implications for its dispersal history in Eurasia
inferred← citeshttps://doi.org/10.1007/s10577-011-9227-2openalex-snapshot
Chromosomal evolution in Rattini (Muridae, Rodentia)
inferred← citeshttps://doi.org/10.1007/s10914-020-09535-4openalex-snapshot
Greater Bandicoot Rats (Bandicota indica) are Not Native to Sundaland Based on Deoxyribonucleic Acid (DNA) Analyses
inferred← citeshttps://doi.org/10.1007/s13353-014-0241-xopenalex-snapshot
LINE-1 retrotransposons: from ‘parasite’ sequences to functional elements
inferred← citeshttps://doi.org/10.1016/j.meegid.2012.03.020openalex-snapshot
Host cell/Orientia tsutsugamushi interactions: Evolution and expression of syndecan-4 in Asian rodents (Rodentia, Muridae)
inferred← citeshttps://doi.org/10.1016/s0079-6603(00)64007-2openalex-snapshot
The biological properties and evolutionary dynamics of mammalian LINE-1 retrotransposons
inferred← citeshttps://doi.org/10.1017/s0952836903004035openalex-snapshot
A review of the rodent fauna of Seram, Moluccas, with the description of a new subspecies of mosaic‐tailed rat, Melomys rufescens paveli
inferred← citeshttps://doi.org/10.1046/j.1095-8312.2003.00142.xopenalex-snapshot
Systematics of the black rat in Madagascar: consequences for the transmission and distribution of plague
inferred← citeshttps://doi.org/10.1071/is05017openalex-snapshot
Phylogeny and host associations of the fur-mite subgenus Listrophoroides (sensu stricto) Hirst (Acari : Atopomelidae) with an intriguing example of synhospitality on rats of the genus Maxomys
inferred← citeshttps://doi.org/10.1073/pnas.95.19.11284openalex-snapshot
Determining and dating recent rodent speciation events by using L1 (LINE-1) retrotransposons
inferred← citeshttps://doi.org/10.1074/jbc.m004070200openalex-snapshot
Expression of Rattus norvegicus mtDNA inMus musculus Cells Results in Multiple Respiratory Chain Defects
inferred← citeshttps://doi.org/10.1074/jbc.m103544200openalex-snapshot
A Novel Brain-specific Box C/D Small Nucleolar RNA Processed from Tandemly Repeated Introns of a Noncoding RNA Gene in Rats
inferred← citeshttps://doi.org/10.1080/10292380109380590openalex-snapshot
Evolution ofRattus(mammalia, Rodentia) during the plio‐pleistocene in Thailand
inferred← citeshttps://doi.org/10.1080/14772019.2014.909537openalex-snapshot
Late Pliocene rodents from the Irrawaddy sediments of central Myanmar and their palaeogeographical significance
inferred← citeshttps://doi.org/10.1093/acprof:oso/9780195162851.003.0001openalex-snapshot
Evolution
inferred← citeshttps://doi.org/10.1093/genetics/150.1.345openalex-snapshot
Molecular Evolution of Two Lineages of L1 (LINE-1) Retrotransposons in the California Mouse, Peromyscus californicus
inferred← citeshttps://doi.org/10.1093/molbev/msg146openalex-snapshot
Following the LINEs: An Analysis of Primate Genomic Variation at Human-Specific LINE-1 Insertion Sites
inferred← citeshttps://doi.org/10.1093/oxfordjournals.molbev.a026140openalex-snapshot
Molecular evolution of the nuclear von Willebrand factor gene in mammals and the phylogeny of rodents
inferred← citeshttps://doi.org/10.1093/oxfordjournals.molbev.a026340openalex-snapshot
LINE-1 (L1) Lineages in the Mouse
inferred← citeshttps://doi.org/10.1093/oxfordjournals.molbev.a026372openalex-snapshot
L1 (LINE-1) Retrotransposon Evolution and Amplification in Recent Human History
inferred← citeshttps://doi.org/10.1111/j.1095-8312.2005.00444.xopenalex-snapshot
Molecular phylogeny of the genus Mus (Rodentia: Murinae) based on mitochondrial and nuclear data
inferred← citeshttps://doi.org/10.1111/j.1439-0469.2006.00390.xopenalex-snapshot
Morphological diversity of Old World rats and mice (Rodentia, Muridae) mandible in relation with phylogeny and adaptation
inferred← citeshttps://doi.org/10.1128/9781555817954.ch35openalex-snapshot
Mammalian LINE‐1 Retrotransposons and Related Elements
inferred← citeshttps://doi.org/10.11609/jott.o2330.589-608openalex-snapshot
Non-volant small mammals of the Western Ghats of Coorg District, southern India
inferred← citeshttps://doi.org/10.1186/1471-2148-10-184openalex-snapshot
Revisiting the taxonomy of the Rattini tribe: a phylogeny-based delimitation of species boundaries
inferred← citeshttps://doi.org/10.1266/ggs.80.367openalex-snapshot
Preliminary genetic characterization of two lineages of black rats (Rattus rattus sensu lato) in Japan, with evidence for introgression at several localities
inferred← citeshttps://doi.org/10.1371/journal.pone.0026357openalex-snapshot
Multiple Geographic Origins of Commensalism and Complex Dispersal History of Black Rats
inferred← citeshttps://doi.org/10.1590/s0102-67202012000100011openalex-snapshot
Idade dos ratos versus idade humana: qual é a relação?
inferred← citeshttps://doi.org/10.1644/10-mamm-a-033.1openalex-snapshot
Morphological, chromosomal, and genic differences between sympatricRattus rattusandRattus sataraein South India
inferred← citeshttps://doi.org/10.31390/gradschool_dissertations.697openalex-snapshot
Following the LINEs (Long INterspersed Elements): human specific L1 elements and their orthologous loci in non-human primates
inferred← citeshttps://doi.org/10.47749/t/unicamp.2016.968828openalex-snapshot
Estudo das alterações histológicas hepáticas em ratos submetidos à operação de derivação jejunoileal
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Flying around in the genome: characterization of LINE-1 in Chiroptera
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