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Strand-specific RNA-seq analysis of the Acidithiobacillus ferrooxidans transcriptome in response to magnesium stress

https://doi.org/10.1007/s00203-018-1503-5
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/s00253-012-4229-3openalex-snapshot
AHL signaling molecules with a large acyl chain enhance biofilm formation on sulfur and metal sulfides by the bioleaching bacterium Acidithiobacillus ferrooxidans
inferredcites →https://doi.org/10.1007/s00284-009-9494-8openalex-snapshot
Type IV Pili of Acidithiobacillus ferrooxidans Are Necessary for Sliding, Twitching Motility, and Adherence
inferredcites →https://doi.org/10.1007/s11274-011-0903-3openalex-snapshot
Global transcriptional analysis of stress-response strategies in Acidithiobacillus ferrooxidans ATCC 23270 exposed to organic extractant—Lix984n
inferredcites →https://doi.org/10.1007/s12223-011-0067-4openalex-snapshot
Insights into the pH up-shift responsive mechanism of Acidithiobacillus ferrooxidans by microarray transcriptome profiling
inferredcites →https://doi.org/10.1016/j.biortech.2015.02.017openalex-snapshot
The use of (5Z)-4-bromo-5-(bromomethylene)-2(5H)-furanone for controlling acid mine drainage through the inhibition of Acidithiobacillus ferrooxidans biofilm formation
inferredcites →https://doi.org/10.1016/j.hydromet.2008.11.007openalex-snapshot
Column bioleaching of a low grade nickel-bearing sulfide ore containing high magnesium as olivine, chlorite and antigorite
inferredcites →https://doi.org/10.1016/j.hydromet.2009.03.017openalex-snapshot
Heap bioleaching of a low-grade nickel-bearing sulfide ore containing high levels of magnesium as olivine, chlorite and antigorite
inferredcites →https://doi.org/10.1016/j.jhazmat.2010.08.113openalex-snapshot
Bioleaching of copper from waste printed circuit boards by bacterial consortium enriched from acid mine drainage
inferredcites →https://doi.org/10.1016/j.resmic.2014.08.006openalex-snapshot
Biofilm formation, communication and interactions of leaching bacteria during colonization of pyrite and sulfur surfaces
inferredcites →https://doi.org/10.1016/j.resmic.2016.05.003openalex-snapshot
Saline-water bioleaching of chalcopyrite with thermophilic, iron(II)- and sulfur-oxidizing microorganisms
inferredcites →https://doi.org/10.1021/pr4009833openalex-snapshot
New Copper Resistance Determinants in the ExtremophileAcidithiobacillus ferrooxidans: A Quantitative Proteomic Analysis
inferredcites →https://doi.org/10.1038/nbt.1883openalex-snapshot
Full-length transcriptome assembly from RNA-Seq data without a reference genome
inferredcites →https://doi.org/10.1038/nmeth.1226openalex-snapshot
Mapping and quantifying mammalian transcriptomes by RNA-Seq
inferredcites →https://doi.org/10.1038/nrmicro2109openalex-snapshot
Principles of c-di-GMP signalling in bacteria
inferredcites →https://doi.org/10.1038/nrmicro2415openalex-snapshot
The biofilm matrix
inferredcites →https://doi.org/10.1073/pnas.261574998openalex-snapshot
Neisseria gonorrhoeae PilV, a type IV pilus-associated protein essential to human epithelial cell adherence
inferredcites →https://doi.org/10.1093/bioinformatics/btp336openalex-snapshot
SOAP2: an improved ultrafast tool for short read alignment
inferredcites →https://doi.org/10.1101/gr.7.10.986openalex-snapshot
The Significance of Digital Gene Expression Profiles
inferredcites →https://doi.org/10.1111/j.1365-2958.2004.04364.xopenalex-snapshot
Type IV pilus biogenesis in Neisseria meningitidis : PilW is involved in a step occurring after pilus assembly, essential for fibre stability and function
inferredcites →https://doi.org/10.1111/j.1472-765x.2011.03066.xopenalex-snapshot
Quorum-sensing system in Acidithiobacillus ferrooxidans involved in its resistance to Cu2+
inferredcites →https://doi.org/10.1111/j.1472-765x.2011.03180.xopenalex-snapshot
The extremophile Acidithiobacillus ferrooxidans possesses a c-di-GMP signalling pathway that could play a significant role during bioleaching of minerals
inferredcites →https://doi.org/10.1111/j.1574-6976.1994.tb00082.xopenalex-snapshot
The chemolithotrophic bacteriumThiobacillus ferrooxidans
inferredcites →https://doi.org/10.1111/ppl.12104openalex-snapshot
Suppression of glycolate oxidase causes glyoxylate accumulation that inhibits photosynthesis through deactivating Rubisco in rice
inferredcites →https://doi.org/10.1128/aem.02948-06openalex-snapshot
Second Acyl Homoserine Lactone Production System in the Extreme Acidophile Acidithiobacillus ferrooxidans
inferredcites →https://doi.org/10.1128/aem.70.9.5177-5182.2004openalex-snapshot
Copper Ions Stimulate Polyphosphate Degradation and Phosphate Efflux in Acidithiobacillus ferrooxidans
inferredcites →https://doi.org/10.1128/aem.71.11.7033-7040.2005openalex-snapshot
Evidence for a Functional Quorum-Sensing Type AI-1 System in the Extremophilic Bacterium Acidithiobacillus ferrooxidans
inferredcites →https://doi.org/10.1128/jb.77.5.642-647.1959openalex-snapshot
STUDIES ON THE CHEMOAUTOTROPHIC IRON BACTERIUM FERROBACILLUS FERROOXIDANS
inferredcites →https://doi.org/10.1186/1471-2164-9-597openalex-snapshot
Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications
inferredcites →https://doi.org/10.1186/1471-2180-10-229openalex-snapshot
Genes and pathways for CO2 fixation in the obligate, chemolithoautotrophic acidophile, Acidithiobacillus ferrooxidans, Carbon fixation in A. ferrooxidans
inferredcites →https://doi.org/10.1271/bbb.69.1394openalex-snapshot
Functional Dissection of a Mercuric Ion Transporter, MerC, fromAcidithiobacillus ferrooxidans
inferredcites →https://doi.org/10.1371/journal.pone.0028516openalex-snapshot
Analysis of Transcriptome Differences between Resistant and Susceptible Strains of the Citrus Red Mite Panonychus citri (Acari: Tetranychidae)
inferredcites →https://doi.org/10.2174/1389202911314030003openalex-snapshot
Strand-Specific RNA-Seq Provides Greater Resolution of Transcriptome Profiling
inferredcites →https://doi.org/10.3389/fmicb.2016.02132openalex-snapshot
Multiple Osmotic Stress Responses in Acidihalobacter prosperus Result in Tolerance to Chloride Ions

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4192422openalex-extracted
Multi-Scale Analysis of Nickel Tolerance Mechanism for Thermophilic Sulfobacillus Thermosulfidooxidans in Bioleaching
inferred← citeshttps://doi.org/10.1007/s00203-025-04473-2openalex-snapshot
Synthesis of N-acyl-homoserine lactones analogs for improving the potential application of Acidithiobacillus thiooxidans in bioleaching
inferred← citeshttps://doi.org/10.1007/s10295-019-02224-zopenalex-snapshot
Adaptive mechanism of Acidithiobacillus thiooxidans CCTCC M 2012104 under stress during bioleaching of low-grade chalcopyrite based on physiological and comparative transcriptomic analysis
inferred← citeshttps://doi.org/10.1007/s11771-020-4277-2openalex-snapshot
Characterization of acylated homoserine lactone derivatives and their influence on biofilms of Acidithiobacillus ferrooxidans BY-3 under arsenic stress
inferred← citeshttps://doi.org/10.1007/s12613-019-1823-8openalex-snapshot
Mechanism of Mg2+ dissolution from olivine and serpentine: Implication for bioleaching of high-magnesium nickel sulfide ore at elevated pH
inferred← citeshttps://doi.org/10.1016/j.desal.2021.115145openalex-snapshot
Effects of reverse solute diffusion on membrane biofouling in pressure-retarded osmosis processes
inferred← citeshttps://doi.org/10.1016/j.jhazmat.2022.130245openalex-snapshot
Multi-scale analysis of nickel ion tolerance mechanism for thermophilic Sulfobacillus thermosulfidooxidans in bioleaching
inferred← citeshttps://doi.org/10.1016/j.jhazmat.2024.134764openalex-snapshot
Multi-scale analysis of acidophilic microbial consortium biofilm's tolerance of lithium and cobalt ions in bioleaching
inferred← citeshttps://doi.org/10.1080/08927014.2019.1674811openalex-snapshot
Magnesium and calcium ions: roles in bacterial cell attachment and biofilm structure maturation
inferred← citeshttps://doi.org/10.1186/s12934-021-01671-7openalex-snapshot
Recent progress in the application of omics technologies in the study of bio-mining microorganisms from extreme environments
inferred← citeshttps://doi.org/10.1186/s40643-023-00636-5openalex-snapshot
Advances in bioleaching of waste lithium batteries under metal ion stress
inferred← citeshttps://doi.org/10.3390/min16010056openalex-snapshot
From Omics to Applications: How Bioinformatics and Multi-Omics Approaches Are Revolutionizing Metal Bioleaching
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