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Exploring the Lignin Catabolism Potential of Soil-Derived Lignocellulolytic Microbial Consortia by a Gene-Centric Metagenomic Approach
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Response of Pseudomonas putida to Complex, Aromatic‐Rich Fractions from Biomass
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Soil-Derived Microbial Consortia Enriched with Different Plant Biomass Reveal Distinct Players Acting in Lignocellulose Degradation
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Novel multispecies microbial consortia involved in lignocellulose and 5-hydroxymethylfurfural bioconversion
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Different inocula produce distinctive microbial consortia with similar lignocellulose degradation capacity
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Characterization of three plant biomass-degrading microbial consortia by metagenomics- and metasecretomics-based approaches
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Mapping the diversity of microbial lignin catabolism: experiences from the eLignin database
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Functional genomic analysis of bacterial lignin degraders: diversity in mechanisms of lignin oxidation and metabolism
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Nucleotide sequence and expression of the catechol 2,3-dioxygenase-encoding gene of phenolcatabolizing Pseudomonas CF600
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Characterisation of Dyp-type peroxidases from Pseudomonas fluorescens Pf-5: Oxidation of Mn(II) and polymeric lignin by Dyp1B
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Characterization of anaerobic consortia coupled lignin depolymerization with biomethane generation
inferredcites →https://doi.org/10.1016/j.biortech.2013.04.033openalex-snapshot
A novel lignin degradation bacterial consortium for efficient pulping
inferredcites →https://doi.org/10.1016/j.biortech.2018.01.058openalex-snapshot
Screening of a microbial consortium for selective degradation of lignin from tree trimmings
inferredcites →https://doi.org/10.1016/j.biortech.2018.08.065openalex-snapshot
Lignin valorization for the production of renewable chemicals: State-of-the-art review and future prospects
inferredcites →https://doi.org/10.1016/j.cbpa.2019.11.007openalex-snapshot
Bacterial enzymes for lignin depolymerisation: new biocatalysts for generation of renewable chemicals from biomass
inferredcites →https://doi.org/10.1016/j.femsec.2004.10.004openalex-snapshot
Production of aromatic compounds during methanogenic degradation of straw in rice field soil
inferredcites →https://doi.org/10.1016/j.jbiotec.2016.08.011openalex-snapshot
Bacterial enzymes involved in lignin degradation
inferredcites →https://doi.org/10.1016/j.procbio.2017.08.018openalex-snapshot
Development and characterization of a thermophilic, lignin degrading microbiota
inferredcites →https://doi.org/10.1016/j.tim.2017.05.012openalex-snapshot
Ecological Insights into the Dynamics of Plant Biomass-Degrading Microbial Consortia
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Characterization of Thiamine Diphosphate-Dependent 4-Hydroxybenzoylformate Decarboxylase Enzymes from Rhodococcus jostii RHA1 and Pseudomonas fluorescens Pf-5 Involved in Degradation of Aryl C2 Lignin Degradation Fragments
inferredcites →https://doi.org/10.1021/acschembio.5b00298openalex-snapshot
Identification of Manganese Superoxide Dismutase from Sphingobacterium sp. T2 as a Novel Bacterial Enzyme for Lignin Oxidation
inferredcites →https://doi.org/10.1021/acschembio.8b00557openalex-snapshot
Sphingobacterium sp. T2 Manganese Superoxide Dismutase Catalyzes the Oxidative Demethylation of Polymeric Lignin via Generation of Hydroxyl Radical
inferredcites →https://doi.org/10.1038/ismej.2015.57openalex-snapshot
Forest harvesting reduces the soil metagenomic potential for biomass decomposition
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Fast and sensitive taxonomic classification for metagenomics with Kaiju
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Bacterial contributions to delignification and lignocellulose degradation in forest soils with metagenomic and quantitative stable isotope probing
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Revealing the insoluble metasecretome of lignocellulose-degrading microbial communities
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Unveiling the metabolic potential of two soil-derived microbial consortia selected on wheat straw
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Cellulose and hemicellulose decomposition by forest soil bacteria proceeds by the action of structurally variable enzymatic systems
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Pathways for degradation of lignin in bacteria and fungi
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Systems biology-guided biodesign of consolidated lignin conversion
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Current opportunities and challenges in microbial metagenome analysis--a bioinformatic perspective
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Identifying biologically relevant differences between metagenomic communities
inferredcites →https://doi.org/10.1093/bioinformatics/bts565openalex-snapshot
CD-HIT: accelerated for clustering the next-generation sequencing data
inferredcites →https://doi.org/10.1093/femsre/fux049openalex-snapshot
Lignin degradation: microorganisms, enzymes involved, genomes analysis and evolution
inferredcites →https://doi.org/10.1093/nar/gkw419openalex-snapshot
Heatmapper: web-enabled heat mapping for all
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Lignin catabolic pathways reveal unique characteristics of dye‐decolorizing peroxidases in Pseudomonas putida
inferredcites →https://doi.org/10.1111/1758-2229.12597openalex-snapshot
Bacterial catabolism of lignin‐derived aromatics: New findings in a recent decade: Update on bacterial lignin catabolism
inferredcites →https://doi.org/10.1126/science.1137016openalex-snapshot
Biomass Recalcitrance: Engineering Plants and Enzymes for Biofuels Production
inferredcites →https://doi.org/10.1126/science.1246843openalex-snapshot
Lignin Valorization: Improving Lignin Processing in the Biorefinery
inferredcites →https://doi.org/10.1128/aem.02838-15openalex-snapshot
Identification of Genes Conferring Tolerance to Lignocellulose-Derived Inhibitors by Functional Selections in Soil Metagenomes
inferredcites →https://doi.org/10.1128/jb.185.6.1768-1775.2003openalex-snapshot
Roles of the Enantioselective Glutathione S -Transferases in Cleavage of β-Aryl Ether
inferredcites →https://doi.org/10.1146/annurev-chembioeng-061010-114205openalex-snapshot
Deconstruction of Lignocellulosic Biomass to Fuels and Chemicals
inferredcites →https://doi.org/10.1146/annurev.arplant.54.031902.134938openalex-snapshot
Lignin Biosynthesis
inferredcites →https://doi.org/10.1155/2017/8951658openalex-snapshot
Structural Characterization of Lignin and Its Degradation Products with Spectroscopic Methods
inferredcites →https://doi.org/10.1186/1471-2105-9-386openalex-snapshot
The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes
inferredcites →https://doi.org/10.1186/s13059-014-0550-8openalex-snapshot
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
inferredcites →https://doi.org/10.1186/s13068-017-0735-yopenalex-snapshot
Biodegradation of alkaline lignin by Bacillus ligniniphilus L1
inferredcites →https://doi.org/10.1186/s13068-018-1073-4openalex-snapshot
Lignolytic-consortium omics analyses reveal novel genomes and pathways involved in lignin modification and valorization
inferredcites →https://doi.org/10.1186/s13068-018-1164-2openalex-snapshot
Defining functional diversity for lignocellulose degradation in a microbial community using multi-omics studies
inferredcites →https://doi.org/10.1186/s13068-018-1341-3openalex-snapshot
Genomics and biochemistry investigation on the metabolic pathway of milled wood and alkali lignin-derived aromatic metabolites of Comamonas serinivorans SP-35
inferredcites →https://doi.org/10.1186/s13068-019-1376-0openalex-snapshot
Recent advances in lignin valorization with bacterial cultures: microorganisms, metabolic pathways, and bio-products
inferredcites →https://doi.org/10.1186/s13068-019-1499-3openalex-snapshot
Laccase pretreatment of wheat straw: effects of the physicochemical characteristics and the kinetics of enzymatic hydrolysis
inferredcites →https://doi.org/10.1271/bbb.110301openalex-snapshot
Characterization of Two Isozymes of Coniferyl Alcohol Dehydrogenase fromStreptomycessp. NL15-2K
inferredcites →https://doi.org/10.1271/bbb.60437openalex-snapshot
Genetic and Biochemical Investigations on Bacterial Catabolic Pathways for Lignin-Derived Aromatic Compounds
inferredcites →https://doi.org/10.1371/journal.pone.0019306openalex-snapshot
Characterization of Trapped Lignin-Degrading Microbes in Tropical Forest Soil
inferredcites →https://doi.org/10.3389/fbioe.2019.00209openalex-snapshot
Bacterial Valorization of Lignin: Strains, Enzymes, Conversion Pathways, Biosensors, and Perspectives
inferredcites →https://doi.org/10.3389/fmicb.2018.00364openalex-snapshot
Substrate Shift Reveals Roles for Members of Bacterial Consortia in Degradation of Plant Cell Wall Polymers
inferredcites →https://doi.org/10.3389/fmicb.2018.00922openalex-snapshot
Enrichment of Bacteria From Eastern Mediterranean Sea Involved in Lignin Degradation via the Phenylacetyl-CoA Pathway
inferredcites →https://doi.org/10.3390/microorganisms7120657openalex-snapshot
Microbial and Phenyl Acid Dynamics during the Start-up Phase of Anaerobic Straw Degradation in Meso- and Thermophilic Batch Reactors
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Incoming claims: where this work appears in other papers’ reference lists and arguments.
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inferred← citeshttps://doi.org/10.1016/j.mib.2021.10.014openalex-snapshot
Microbial assimilation of lignin-derived aromatic compounds and conversion to value-added products
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Microbial hosts for metabolic engineering of lignin bioconversion to renewable chemicals
inferred← citeshttps://doi.org/10.1016/j.syapm.2023.126485openalex-snapshot
Andean soil-derived lignocellulolytic bacterial consortium as a source of novel taxa and putative plastic-active enzymes
inferred← citeshttps://doi.org/10.1016/j.ymben.2021.11.011openalex-snapshot
Guiding stars to the field of dreams: Metabolically engineered pathways and microbial platforms for a sustainable lignin-based industry
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Additional file 1 of Dynamic changes in community structure and degradation performance of a bacterial consortium MMBC-1 during the subculturing revival reveal the potential decomposers of lignocellulose
inferred← citeshttps://doi.org/10.6084/m9.figshare.21384353openalex-snapshot
Additional file 2 of Dynamic changes in community structure and degradation performance of a bacterial consortium MMBC-1 during the subculturing revival reveal the potential decomposers of lignocellulose
inferred← citeshttps://doi.org/10.6084/m9.figshare.21384356openalex-snapshot
Additional file 3 of Dynamic changes in community structure and degradation performance of a bacterial consortium MMBC-1 during the subculturing revival reveal the potential decomposers of lignocellulose
inferred← citeshttps://doi.org/10.6084/m9.figshare.21384359openalex-snapshot
Additional file 4 of Dynamic changes in community structure and degradation performance of a bacterial consortium MMBC-1 during the subculturing revival reveal the potential decomposers of lignocellulose
inferred← citeshttps://doi.org/10.6084/m9.figshare.21384362openalex-snapshot
Additional file 5 of Dynamic changes in community structure and degradation performance of a bacterial consortium MMBC-1 during the subculturing revival reveal the potential decomposers of lignocellulose
inferred← citeshttps://doi.org/10.6084/m9.figshare.26681296openalex-snapshot
Additional file 1 of Lignin bioconversion based on genome mining for ligninolytic genes in Erwinia billingiae QL-Z3
inferred← citeshttps://doi.org/10.7717/peerj.11749openalex-snapshot
Diversity and function of culturable actinobacteria in the root-associated of Salvia miltiorrhiza Bunge
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