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Comparative Analysis of Microbial Profiles in Cow Rumen Fed with Different Dietary Fiber by Tagged 16S rRNA Gene Pyrosequencing

https://doi.org/10.1007/s00284-013-0336-3
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/bf02825882openalex-snapshot
Systematics and evolution of ruminal species of the genusPrevotella
inferredcites →https://doi.org/10.1007/s00248-009-9609-6openalex-snapshot
Rumen Bacterial Diversity Dynamics Associated with Changing from Bermudagrass Hay to Grazed Winter Wheat Diets
inferredcites →https://doi.org/10.1007/s00248-009-9623-8openalex-snapshot
Microbial Fuel Cells and Microbial Ecology: Applications in Ruminant Health and Production Research
inferredcites →https://doi.org/10.1007/s002840010089openalex-snapshot
Phenotypic Characterization of Polysaccharidases Produced by Four Prevotella Type Strains
inferredcites →https://doi.org/10.1016/j.mimet.2003.08.009openalex-snapshot
Review and re-analysis of domain-specific 16S primers
inferredcites →https://doi.org/10.1016/j.str.2004.08.010openalex-snapshot
Structures of Selenomonas ruminantium Phytase in Complex with Persulfated Phytate
inferredcites →https://doi.org/10.1016/s0168-6445(03)00072-xopenalex-snapshot
Opportunities to improve fiber degradation in the rumen: microbiology, ecology, and genomics
inferredcites →https://doi.org/10.1023/b:anto.0000047942.69033.24openalex-snapshot
16S rDNA library-based analysis of ruminal bacterial diversity
inferredcites →https://doi.org/10.1038/ismej.2008.127openalex-snapshot
A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses
inferredcites →https://doi.org/10.1038/nprot.2007.520openalex-snapshot
Parallel tagged sequencing on the 454 platform
inferredcites →https://doi.org/10.1046/j.1365-2672.94.s1.12.xopenalex-snapshot
Cattle and sheep farms as reservoirs ofCampylobacter
inferredcites →https://doi.org/10.1093/bioinformatics/btr381openalex-snapshot
UCHIME improves sensitivity and speed of chimera detection
inferredcites →https://doi.org/10.1093/molbev/msm092openalex-snapshot
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0
inferredcites →https://doi.org/10.1099/00207713-44-2-187openalex-snapshot
Oribaculum catoniae gen. nov., sp. nov.; Catonella morbi gen. nov., sp. nov.; Hallella seregens gen. nov., sp. nov.; Johnsonella ignava gen. nov., sp. nov.; and Dialister pneumosintes gen. nov., comb. nov., nom. rev., Anaerobic Gram-Negative Bacilli from the Human Gingival Crevice
inferredcites →https://doi.org/10.1099/ijs.0.02345-0openalex-snapshot
Butyrivibrio hungatei sp. nov. and Pseudobutyrivibrio xylanivorans sp. nov., butyrate-producing bacteria from the rumen
inferredcites →https://doi.org/10.1099/ijs.0.026989-0openalex-snapshot
Description of Christensenella minuta gen. nov., sp. nov., isolated from human faeces, which forms a distinct branch in the order Clostridiales, and proposal of Christensenellaceae fam. nov.
inferredcites →https://doi.org/10.1099/ijs.0.65259-0openalex-snapshot
Ruminococcus gauvreauii sp. nov., a glycopeptide-resistant species isolated from a human faecal specimen
inferredcites →https://doi.org/10.1111/j.1469-8137.2009.03003.xopenalex-snapshot
454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity
inferredcites →https://doi.org/10.1111/j.1574-6941.1999.tb00607.xopenalex-snapshot
Rumen bacterial diversity as determined by sequence analysis of 16S rDNA libraries
inferredcites →https://doi.org/10.1111/j.1574-6941.2000.tb00728.xopenalex-snapshot
Unravelling the genetic diversity of ruminal bacteria belonging to the CFB phylum
inferredcites →https://doi.org/10.1126/science.1200387openalex-snapshot
Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen
inferredcites →https://doi.org/10.1128/aem.00062-07openalex-snapshot
Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
inferredcites →https://doi.org/10.1128/aem.00104-12openalex-snapshot
Comparative Survey of Rumen Microbial Communities and Metabolites across One Caprine and Three Bovine Groups, Using Bar-Coded Pyrosequencing and 1 H Nuclear Magnetic Resonance Spectroscopy
inferredcites →https://doi.org/10.1128/aem.00193-08openalex-snapshot
Anaerobic Consumers of Monosaccharides in a Moderately Acidic Fen
inferredcites →https://doi.org/10.1128/aem.00388-10openalex-snapshot
Rumen Microbial Population Dynamics during Adaptation to a High-Grain Diet
inferredcites →https://doi.org/10.1128/aem.00451-09openalex-snapshot
Pyrosequencing of Tagged 16S rRNA Gene Amplicons for Rapid Deciphering of the Microbiomes of Fermented Foods Such as Pearl Millet Slurries
inferredcites →https://doi.org/10.1128/aem.00993-10openalex-snapshot
Characterization of Novel Bovine Gastrointestinal Tract Treponema Isolates and Comparison with Bovine Digital Dermatitis Treponemes
inferredcites →https://doi.org/10.1128/aem.01210-08openalex-snapshot
Molecular Diversity of a North Carolina Wastewater Treatment Plant as Revealed by Pyrosequencing
inferredcites →https://doi.org/10.1128/aem.01541-09openalex-snapshot
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
inferredcites →https://doi.org/10.1128/aem.02477-10openalex-snapshot
Microarray Analysis and Barcoded Pyrosequencing Provide Consistent Microbial Profiles Depending on the Source of Human Intestinal Samples
inferredcites →https://doi.org/10.1128/aem.02812-07openalex-snapshot
Structure of the Archaeal Community of the Rumen
inferredcites →https://doi.org/10.1128/aem.05321-11openalex-snapshot
Biochemical Characterization and Relative Expression Levels of Multiple Carbohydrate Esterases of the Xylanolytic Rumen Bacterium Prevotella ruminicola 23 Grown on an Ester-Enriched Substrate
inferredcites →https://doi.org/10.1128/aem.63.11.4355-4359.1997openalex-snapshot
Glycogen biosynthesis via UDP-glucose in the ruminal bacterium Prevotella bryantii B1(4)
inferredcites →https://doi.org/10.1128/aem.67.6.2766-2774.2001openalex-snapshot
Diet-Dependent Shifts in the Bacterial Population of the Rumen Revealed with Real-Time PCR
inferredcites →https://doi.org/10.1128/aem.70.3.1315-1320.2004openalex-snapshot
Description of Treponema azotonutricium sp. nov. and Treponema primitia sp. nov., the First Spirochetes Isolated from Termite Guts
inferredcites →https://doi.org/10.1136/gut.2007.133603openalex-snapshot
High-throughput diversity and functionality analysis of the gastrointestinal tract microbiota
inferredcites →https://doi.org/10.1146/annurev.es.06.110175.000351openalex-snapshot
The Rumen Microbial Ecosystem
inferredcites →https://doi.org/10.1186/1471-2180-8-125openalex-snapshot
Evaluation of the bacterial diversity in the feces of cattle using 16S rDNA bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP)
inferredcites →https://doi.org/10.1371/journal.pone.0002836openalex-snapshot
Comparative Analysis of Human Gut Microbiota by Barcoded Pyrosequencing
inferredcites →https://doi.org/10.1371/journal.pone.0033306openalex-snapshot
Composition and Similarity of Bovine Rumen Microbiota across Individual Animals
inferredcites →https://doi.org/10.2527/jas.2008-1313openalex-snapshot
Recent advances in modeling nutrient utilization in ruminants1
inferredcites →https://doi.org/10.2527/jas.2010-2900openalex-snapshot
Evaluation of bacterial diversity in the rumen and feces of cattle fed different levels of dried distillers grains plus solubles using bacterial tag-encoded FLX amplicon pyrosequencing1
inferredcites →https://doi.org/10.3945/jn.112.159574openalex-snapshot
Shifts in the Rumen Microbiota Due to the Type of Carbohydrate and Level of Protein Ingested by Dairy Cattle Are Associated with Changes in Rumen Fermentation

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Composition and Function of Gut Microbiota in Bovidae
inferred← citeshttps://doi.org/10.2139/ssrn.4471832openalex-extracted
Alfalfa Hay Enhances Beef Quality by Modulation of Rumen Microbial Community
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Gut Microbiota Provide Co‐Existing Strategies for Two Species of Symmetrically Distributed Rodents in Competition for Food
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Effect of dietary forage sources on rumen microbiota, rumen fermentation and biogenic amines in dairy cows
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Modulatory effects of condensed tannin fractions of different molecular weights from a Leucaena leucocephala hybrid on the bovine rumen bacterial community in vitro
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Analysis of the Microbiota in the Fecal Material of Painted Turtles (Chrysemys picta)
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Microbial profiles of liquid and solid fraction associated biomaterial in buffalo rumen fed green and dry roughage diets by tagged 16S rRNA gene pyrosequencing
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The effects of supplementing sweet sorghum with grapeseeds on dry matter intake, average daily gain, feed digestibility and rumen parameters and microbiota in lambs
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Diet containing sulfur shifted hydrogen metabolism from methanogenesis to alternative sink and influenced fermentation and gut microbial ecosystem of goats
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Emerging role of ruminal microbiota in the development of perinatal bovine diseases
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Influences of dietary selenomethionine exposure on tissue accumulation, blood biochemical profiles, gene expression and intestinal microbiota of Carassius auratus
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Differential Microbial Communities of Omnivorous and Herbivorous Cattle in Southern China
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Regulation of gut bacteria in silkworm (Bombyx mori) after exposure to endogenous cadmium-polluted mulberry leaves
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Effects of ethanol addition on caproic acid production and rumen microorganism community structure from straw fermentation
inferred← citeshttps://doi.org/10.1016/j.heliyon.2023.e20803openalex-snapshot
Alfalfa hay substitution for wheat straw improves beef quality via rumen microflora alteration
inferred← citeshttps://doi.org/10.1016/j.hlife.2024.11.004openalex-snapshot
Altitude adaptation: The unseen work of gut microbiota
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2025.141858openalex-snapshot
Effective mechanism of polysaccharides from Erxian herbal pair in promoting bone repair in traumatic osteomyelitis by activating osteoblast GPR41 and inhibiting the MEK/ERK/MAPK signalling axis
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Bacterial community dynamics in a rumen fluid bioreactor during in-vitro cultivation
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Synergetic action between the rumen microbiota and bovine health
inferred← citeshttps://doi.org/10.1016/j.smallrumres.2023.107107openalex-snapshot
Does intestinal bacteria diversity drive multi-dimensional sheep (Ovis aries) health?
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In-depth diversity analysis of the bacterial community resident in the camel rumen
inferred← citeshttps://doi.org/10.1016/j.syapm.2017.02.003openalex-snapshot
In depth analysis of rumen microbial and carbohydrate-active enzymes profile in Indian crossbred cattle
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Microbiota composition, gene pool and its expression in Gir cattle (Bos indicus) rumen under different forage diets using metagenomic and metatranscriptomic approaches
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Intestinal microbiota dysbiosis play a role in pathogenesis of patients with primary immune thrombocytopenia
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Forage-free diet in finishing cattle: Effects on performance, ruminal fermentation, and enteric methane mitigation
inferred← citeshttps://doi.org/10.1016/s2095-3119(16)61346-1openalex-snapshot
Diversity shifts of rumen bacteria induced by dietary forages in dairy cows and quantification of the changed bacteria using a new primer design strategy
inferred← citeshttps://doi.org/10.1021/acs.jafc.6b00708openalex-snapshot
Ruminal Methanogen Community in Dairy Cows Fed Agricultural Residues of Corn Stover, Rapeseed, and Cottonseed Meals
inferred← citeshttps://doi.org/10.1038/s41598-019-46604-yopenalex-snapshot
Characterization of bacterial community changes and antibiotic resistance genes in lamb manure of different incidence
inferred← citeshttps://doi.org/10.1038/s41598-019-48294-yopenalex-snapshot
Rumen bacterial community responses to DPA, EPA and DHA in cattle and sheep: A comparative in vitro study
inferred← citeshttps://doi.org/10.1038/s41598-023-35828-8openalex-snapshot
Production performance and rumen bacterial community structure of Hu sheep fed fermented spent mushroom substrate from Pleurotus eryngii
inferred← citeshttps://doi.org/10.1038/s41598-024-51828-8openalex-snapshot
Bacterial community and diversity in the rumen of 11 Mongolian cattle as revealed by 16S rRNA amplicon sequencing
inferred← citeshttps://doi.org/10.1038/s41598-024-69277-8openalex-snapshot
The comparison of gut microbiota between wild and captive Asian badgers (Meles leucurus) under different seasons
inferred← citeshttps://doi.org/10.1038/s41598-024-74988-zopenalex-snapshot
Effect of different genetic backgrounds on rumen microbiota and serum metabolic phenotypes in beef cattle
inferred← citeshttps://doi.org/10.1038/s41598-025-11020-yopenalex-snapshot
Hindgut microbiota profiling and functional prediction of sheep (Ovis aries) fed with different dietary calcium levels
inferred← citeshttps://doi.org/10.1038/srep15557openalex-snapshot
The nasopharyngeal microbiota of feedlot cattle
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Metagenomic analysis of the microbiome in the large intestine of cattle with additional inclusion of ultrafine particles Cr2O3
inferred← citeshttps://doi.org/10.1071/an20459openalex-snapshot
Comparison of microbial diversity in rumen and small intestine of Xinong Saanen dairy goats using 16S rRNA gene high-throughput sequencing
inferred← citeshttps://doi.org/10.1080/09712119.2018.1495082openalex-snapshot
Ex-vivo cow rumen fluid fermentation: changes in microbial populations and fermentation products with different forages
inferred← citeshttps://doi.org/10.1080/10495398.2022.2058006openalex-snapshot
The impact of lactating Hu sheep’s dietary protein levels on lactation performance, progeny growth and rumen development
inferred← citeshttps://doi.org/10.1080/1828051x.2021.1955627openalex-snapshot
Dietary sodium butyrate protects lipopolysaccharide-induced inflammatory response in lambs through inhibiting TLR4/NF-κB signalling pathway
inferred← citeshttps://doi.org/10.1080/1828051x.2022.2149357openalex-snapshot
The potential role of palygorskite and probiotics complex on the laying performance and faecal microbial community in Xuefeng black-bone chicken
inferred← citeshttps://doi.org/10.1093/cdn/nzac086openalex-snapshot
A Low-Starch and High-Fiber Diet Intervention Impacts the Microbial Community of Raw Bovine Milk
inferred← citeshttps://doi.org/10.1093/femsec/fiae083openalex-snapshot
Interaction between methanotrophy and gastrointestinal nematodes infection on the rumen microbiome of lambs
inferred← citeshttps://doi.org/10.1093/jas/skab017openalex-snapshot
The use of live yeast to increase intake and performance of cattle receiving low-quality tropical forages
inferred← citeshttps://doi.org/10.1093/jas/sky023openalex-snapshot
Responses in the rumen microbiome of Bos taurus and indicus steers fed a low-quality rice straw diet and supplemented protein
inferred← citeshttps://doi.org/10.1093/tas/txab065openalex-snapshot
Effects of supplementation of nonforage fiber source in diets with different starch levels on growth performance, rumen fermentation, nutrient digestion, and microbial flora of Hu lambs
inferred← citeshttps://doi.org/10.1099/ijsem.0.005751openalex-snapshot
Chordicoccus furentiruminis, gen. nov., sp. nov., a novel succinic acid producing bacterium isolated from a steer on a high grain diet
inferred← citeshttps://doi.org/10.1111/are.13381openalex-snapshot
Impacts of diet on hindgut microbiota and short-chain fatty acids in grass carp (Ctenopharyngodon idellus)
inferred← citeshttps://doi.org/10.1111/are.14626openalex-snapshot
Effects of fishmeal replacement with cottonseed protein concentrate on growth, digestive proteinase, intestinal morphology and microflora in pearl gentian grouper (♀ Epinephelus fuscoguttatus × ♂ Epinephelus lanceolatu )
inferred← citeshttps://doi.org/10.1111/jam.12646openalex-snapshot
The capability of non-native strains of Bacteroides bacteria to detect bacteriophages as faecal indicators in a tropical area
inferred← citeshttps://doi.org/10.1111/jam.13583openalex-snapshot
The effect of regular or reduced‐fat distillers grains with solubles on rumen methanogenesis and the rumen bacterial community
inferred← citeshttps://doi.org/10.1111/jam.14060openalex-snapshot
Isolation and screening of aflatoxin-detoxifying yeast and bacteria from ruminal fluids to reduce aflatoxin B1 contamination in dairy cattle feed
inferred← citeshttps://doi.org/10.1111/jam.14873openalex-snapshot
Effect of different glucogenic to lipogenic nutrient ratios on rumen fermentation and bacterial community in vitro
inferred← citeshttps://doi.org/10.1111/jam.15322openalex-snapshot
Changes in rumen microbial community composition in yak in response to seasonal variations
inferred← citeshttps://doi.org/10.1111/jpn.12629openalex-snapshot
The Effect of Lactobacillus isolates on growth performance, immune response, intestinal bacterial community composition of growing Rex Rabbits
inferred← citeshttps://doi.org/10.1111/mec.13872openalex-snapshot
The fungal cultivar of leaf‐cutter ants produces specific enzymes in response to different plant substrates
inferred← citeshttps://doi.org/10.1128/spectrum.03387-22openalex-snapshot
In Vitro Modulation of Rumen Fermentation by Microbiota from the Recombination of Rumen Fluid and Solid Phases
inferred← citeshttps://doi.org/10.1128/spectrum.04764-22openalex-snapshot
Metataxonomic Analysis of the Uterine Microbiota Associated with Low Fertility in Dairy Cows Using Endometrial Tissues Prior to First Artificial Insemination
inferred← citeshttps://doi.org/10.1139/cjm-2015-0201openalex-snapshot
Impact of dietary fiber/starch ratio in shaping caecal microbiota in rabbits
inferred← citeshttps://doi.org/10.1155/2019/9291216openalex-snapshot
Gut Microbiome of Chinese Forest Musk Deer Examined across Gender and Age
inferred← citeshttps://doi.org/10.1155/aia/9911760openalex-snapshot
Role of Biochar as a Feed Additive on Animal Performance, Digestibility, Micro‐Biota Dynamics, and Reduction of Enteric Methane Production
inferred← citeshttps://doi.org/10.11606/t.11.2020.tde-12082020-160723openalex-snapshot
A composição de diferentes dietas e a idade de bezerros leiteiros afetam o microbioma ruminal e intestinal
inferred← citeshttps://doi.org/10.1186/s12866-018-1213-9openalex-snapshot
Effects of dietary energy levels on rumen bacterial community composition in Holstein heifers under the same forage to concentrate ratio condition
inferred← citeshttps://doi.org/10.1186/s12866-026-04785-3openalex-snapshot
Synergistic regulation of selenium yeast and vitamin E on the rumen microbiota-VFA-liver axis in lambs
inferred← citeshttps://doi.org/10.1186/s12917-017-1161-xopenalex-snapshot
Microbial community composition along the digestive tract in forage- and grain-fed bison
inferred← citeshttps://doi.org/10.1186/s12917-019-1993-7openalex-snapshot
Comparison of gut microbiota diversity between wild and captive bharals (Pseudois nayaur)
inferred← citeshttps://doi.org/10.1186/s12917-021-03134-yopenalex-snapshot
Effects of rumen-protected creatine pyruvate on blood biochemical parameters and rumen fluid characteristics in transported beef cattle
inferred← citeshttps://doi.org/10.1186/s12917-024-04412-1openalex-snapshot
Partially substituting roughage with traditional Chinese herbal medicine residues in the diet of goats improved feed quality, growth performance, hematology, and rumen microbial profiles
inferred← citeshttps://doi.org/10.1186/s12934-021-01707-yopenalex-snapshot
Effect of stocking density and age on physiological performance and dynamic gut bacterial and fungal communities in Langya hens
inferred← citeshttps://doi.org/10.1186/s12934-022-01783-8openalex-snapshot
Sex differences in rumen fermentation and microbiota of Tibetan goat
inferred← citeshttps://doi.org/10.1186/s13068-018-1012-4openalex-snapshot
Organic acid production from potato starch waste fermentation by rumen microbial communities from Dutch and Thai dairy cows
inferred← citeshttps://doi.org/10.1186/s13213-022-01669-5openalex-snapshot
Gut microbiota reveals the environmental adaption in gastro-intestinal tract of wild boar in karst region of Southwest China
inferred← citeshttps://doi.org/10.1186/s13568-016-0310-0openalex-snapshot
Metagenomic insights into the rumen microbial fibrolytic enzymes in Indian crossbred cattle fed finger millet straw
inferred← citeshttps://doi.org/10.1186/s13568-017-0374-5openalex-snapshot
Characterization of the gut microbiota in the golden takin (Budorcas taxicolor bedfordi)
inferred← citeshttps://doi.org/10.1186/s13568-017-0378-1openalex-snapshot
Microbial community compositions in the gastrointestinal tract of Chinese Mongolian sheep using Illumina MiSeq sequencing revealed high microbial diversity
inferred← citeshttps://doi.org/10.1186/s13568-017-0517-8openalex-snapshot
Comparison of the gut microbiota composition between wild and captive sika deer (Cervus nippon hortulorum) from feces by high-throughput sequencing
inferred← citeshttps://doi.org/10.1186/s13568-022-01350-9openalex-snapshot
Sodium nitrate has no detrimental effect on milk fatty acid profile and rumen bacterial population in water buffaloes
inferred← citeshttps://doi.org/10.1186/s40104-017-0142-zopenalex-snapshot
Comparison of rumen bacteria distribution in original rumen digesta, rumen liquid and solid fractions in lactating Holstein cows
inferred← citeshttps://doi.org/10.1186/s40104-019-0312-2openalex-snapshot
Effects of urea plus nitrate pretreated rice straw and corn oil supplementation on fiber digestibility, nitrogen balance, rumen fermentation, microbiota and methane emissions in goats
inferred← citeshttps://doi.org/10.1186/s40104-023-00837-0openalex-snapshot
Effects of inoculating feruloyl esterase-producing Lactiplantibacillus plantarum A1 on ensiling characteristics, in vitro ruminal fermentation and microbiota of alfalfa silage
inferred← citeshttps://doi.org/10.1186/s40104-023-00856-xopenalex-snapshot
Colonization and development of the gut microbiome in calves
inferred← citeshttps://doi.org/10.1186/s40168-017-0374-3openalex-snapshot
Dietary energy drives the dynamic response of bovine rumen viral communities
inferred← citeshttps://doi.org/10.1186/s42523-020-00042-8openalex-snapshot
Survey of rumen microbiota of domestic grazing yak during different growth stages revealed novel maturation patterns of four key microbial groups and their dynamic interactions
inferred← citeshttps://doi.org/10.1371/journal.pone.0091864openalex-snapshot
Relationship between the Rumen Microbiome and Residual Feed Intake-Efficiency of Brahman Bulls Stocked on Bermudagrass Pastures
inferred← citeshttps://doi.org/10.1371/journal.pone.0170050openalex-snapshot
Changes in bacterial community composition of Escherichia coli O157:H7 super-shedder cattle occur in the lower intestine
inferred← citeshttps://doi.org/10.1371/journal.pone.0205670openalex-snapshot
Rumen microbiome in dairy calves fed copper and grape-pomace dietary supplementations: Composition and predicted functional profile
inferred← citeshttps://doi.org/10.1371/journal.pone.0276542openalex-snapshot
Effects of different weaning times on the stress response and the intestinal microbiota composition of female forest musk deer (Moschus berezovskii) and their fawns
inferred← citeshttps://doi.org/10.18174/460705openalex-snapshot
Assessing rumen microbial composition and fibre attachment in dairy cows
inferred← citeshttps://doi.org/10.18632/oncotarget.23073openalex-snapshot
Effect of calcium salt of long-chain fatty acids and alfalfa supplementation on performance of Holstein bulls
inferred← citeshttps://doi.org/10.21203/rs.3.rs-10911955/v1openalex-snapshot
Effects of replacing peanut vine hay with wheat husk on in vitro rumen fermentation, nutrient degradability, and microbial community dynamics of buffalo
inferred← citeshttps://doi.org/10.22201/fesz.23958723e.2022.430openalex-snapshot
Metagenómica y metatranscriptómica para mitigar las emisiones de metano por animales rumiantes
inferred← citeshttps://doi.org/10.2478/aoas-2022-0002openalex-snapshot
Understanding microbial networks of farm animals through genomics, metagenomics and other meta-omic approaches for livestock wellness and sustainability – A Review
inferred← citeshttps://doi.org/10.25225/fozo.019.2019openalex-snapshot
Gut microbiota of the scimitar-horned oryx, Oryx dammah
inferred← citeshttps://doi.org/10.2527/jas.2014-7811openalex-snapshot
Effect of postextraction algal residue supplementation on the ruminal microbiome of steers consuming low-quality forage1
inferred← citeshttps://doi.org/10.3168/jds.2014-8003openalex-snapshot
Ruminal bacterial community shifts in grain-, sugar-, and histidine-challenged dairy heifers
inferred← citeshttps://doi.org/10.3168/jds.2014-8049openalex-snapshot
Effects of partial mixed rations and supplement amounts on milk production and composition, ruminal fermentation, bacterial communities, and ruminal acidosis
inferred← citeshttps://doi.org/10.3168/jds.2016-11994openalex-snapshot
Differential effects of monensin and a blend of essential oils on rumen microbiota composition of transition dairy cows
inferred← citeshttps://doi.org/10.3168/jds.2017-13859openalex-snapshot
Effects of repeated subacute ruminal acidosis challenges on the adaptation of the rumen bacterial community in Holstein bulls
inferred← citeshttps://doi.org/10.3168/jds.2017-14182openalex-snapshot
An evaluation of Molly cow model predictions of ruminal metabolism and nutrient digestion for dairy and beef diets
inferred← citeshttps://doi.org/10.3168/jds.2018-15647openalex-snapshot
Molecular hydrogen produced by elemental magnesium inhibits rumen fermentation and enhances methanogenesis in dairy cows
inferred← citeshttps://doi.org/10.3168/jds.2019-16611openalex-snapshot
Effects of oregano essential oil on in vitro ruminal fermentation, methane production, and ruminal microbial community
inferred← citeshttps://doi.org/10.3168/jds.2020-19072openalex-snapshot
Digestibility, lactation performance, plasma metabolites, ruminal fermentation, and bacterial communities in Holstein cows fed a fermented corn gluten-wheat bran mixture as a substitute for soybean meal
inferred← citeshttps://doi.org/10.3168/jds.2020-19118openalex-snapshot
Gene function adjustment for carbohydrate metabolism and enrichment of rumen microbiota with antibiotic resistance genes during subacute rumen acidosis induced by a high-grain diet in lactating dairy cows
inferred← citeshttps://doi.org/10.3168/jds.2021-20408openalex-snapshot
Diets varying in ratio of sweet sorghum silage to corn silage for lactating dairy cows: Feed intake, milk production, blood biochemistry, ruminal fermentation, and ruminal microbial community
inferred← citeshttps://doi.org/10.3168/jds.2021-20490openalex-snapshot
Changes in rumen fermentation and bacterial community in lactating dairy cows with subacute rumen acidosis following rumen content transplantation
inferred← citeshttps://doi.org/10.3168/jds.2022-21812openalex-snapshot
Influence of dietary carbohydrate profile on the dairy cow rumen meta-proteome
inferred← citeshttps://doi.org/10.3168/jds.2023-23669openalex-snapshot
Effects of cashew nut shell extract and monensin on in vitro ruminal fermentation, methane production, and ruminal bacterial community
inferred← citeshttps://doi.org/10.3168/jdsc.2024-0566openalex-snapshot
Comparing rumen fluid collection methods on fermentation profile and microbial population in lactating dairy cows
inferred← citeshttps://doi.org/10.33284/2658-3135-104-3-186openalex-snapshot
Changes in the taxonomic composition of the intestinal microbiome of cattle raised on a protein diet
inferred← citeshttps://doi.org/10.3389/fcimb.2017.00506openalex-snapshot
Cattle Tick Rhipicephalus microplus-Host Interface: A Review of Resistant and Susceptible Host Responses
inferred← citeshttps://doi.org/10.3389/fmicb.2016.01206openalex-snapshot
Rumen Bacterial Community Composition in Holstein and Jersey Cows Is Different under Same Dietary Condition and Is Not Affected by Sampling Method
inferred← citeshttps://doi.org/10.3389/fmicb.2017.00704openalex-snapshot
The Type of Forage Substrate Preparation Included as Substrate in a RUSITEC System Affects the Ruminal Microbiota and Fermentation Characteristics
inferred← citeshttps://doi.org/10.3389/fmicb.2017.01111openalex-snapshot
Monensin and Nisin Affect Rumen Fermentation and Microbiota Differently In Vitro
inferred← citeshttps://doi.org/10.3389/fmicb.2017.01585openalex-snapshot
Succession and Fermentation Products of Grass Carp (Ctenopharyngodon idellus) Hindgut Microbiota in Response to an Extreme Dietary Shift
inferred← citeshttps://doi.org/10.3389/fmicb.2017.01605openalex-snapshot
A Structural and Functional Elucidation of the Rumen Microbiome Influenced by Various Diets and Microenvironments
inferred← citeshttps://doi.org/10.3389/fmicb.2018.00032openalex-snapshot
The Dynamic Distribution of Small-Tail Han Sheep Microbiota across Different Intestinal Segments
inferred← citeshttps://doi.org/10.3389/fmicb.2018.01674openalex-snapshot
High-Throughput Analysis Reveals Seasonal Variation of the Gut Microbiota Composition Within Forest Musk Deer (Moschus berezovskii)
inferred← citeshttps://doi.org/10.3389/fmicb.2018.02285openalex-snapshot
The Planktonic Core Microbiome and Core Functions in the Cattle Rumen by Next Generation Sequencing
inferred← citeshttps://doi.org/10.3389/fmicb.2018.02509openalex-snapshot
Dynamic Distribution of Gut Microbiota in Goats at Different Ages and Health States
inferred← citeshttps://doi.org/10.3389/fmicb.2018.02944openalex-snapshot
Expression of a Recombinant Lentinula edodes Xylanase by Pichia pastoris and Its Effects on Ruminal Fermentation and Microbial Community in in vitro Incubation of Agricultural Straws
inferred← citeshttps://doi.org/10.3389/fmicb.2019.00356openalex-snapshot
Saponin-Induced Shifts in the Rumen Microbiome and Metabolome of Young Cattle
inferred← citeshttps://doi.org/10.3389/fmicb.2020.00363openalex-snapshot
Gut Microbiomes of Endangered Przewalski’s Horse Populations in Short- and Long-Term Captivity: Implication for Species Reintroduction Based on the Soft-Release Strategy
inferred← citeshttps://doi.org/10.3389/fmicb.2020.01746openalex-snapshot
Microbiota in Dung and Milk Differ Between Organic and Conventional Dairy Farms
inferred← citeshttps://doi.org/10.3389/fmicb.2022.1039217openalex-snapshot
Glucogenic and lipogenic diets affect in vitro ruminal microbiota and metabolites differently
inferred← citeshttps://doi.org/10.3389/fmicb.2022.830321openalex-snapshot
Comparative Analysis of the Gut Microbiota of Mongolian Gazelle (Procapra gutturosa) Under Fragmented Habitats
inferred← citeshttps://doi.org/10.3389/fmicb.2022.870385openalex-snapshot
Diet Supplementation With Sulfur Amino Acids Modulated Fermentation Metabolome and Gut Microbiome in Goats
inferred← citeshttps://doi.org/10.3389/fmicb.2022.913358openalex-snapshot
Comparative Analysis of Gut Microbial Composition and Functions in Przewalski’s Gazelle (Procapra przewalskii) From Various Habitats
inferred← citeshttps://doi.org/10.3389/fmicb.2023.1119887openalex-snapshot
Fermented cottonseed and rapeseed meals outperform soybean meal in improving performance, rumen fermentation, and bacterial composition in Hu sheep
inferred← citeshttps://doi.org/10.3389/fmicb.2023.1236955openalex-snapshot
Effects of replacing hybrid giant napier with sugarcane bagasse and fermented sugarcane bagasse on growth performance, nutrient digestibility, rumen fermentation characteristics, and rumen microorganisms of Simmental crossbred cattle
inferred← citeshttps://doi.org/10.3389/fmicb.2023.1269123openalex-snapshot
Dynamic changes of rumen bacteria and their fermentative ability in high-producing dairy cows during the late perinatal period
inferred← citeshttps://doi.org/10.3389/fmicb.2023.1282851openalex-snapshot
Rumen and fecal microbiomes are related to diet and production traits in Bos indicus beef cattle
inferred← citeshttps://doi.org/10.3389/fmicb.2024.1132151openalex-snapshot
Comparison of ruminal microbiota, IL-1β gene variation, and tick incidence between Holstein × Gyr and Holstein heifers in grazing system
inferred← citeshttps://doi.org/10.3389/fmicb.2024.1365681openalex-snapshot
The effect of Phyllanthus emblica (Amla) fruit supplementation on the rumen microbiota and its correlation with rumen fermentation in dairy cows
inferred← citeshttps://doi.org/10.3389/fmicb.2024.1416883openalex-snapshot
High concentrate diets altered the structure and function of rumen microbiome in goats
inferred← citeshttps://doi.org/10.3389/fmicb.2024.1431063openalex-snapshot
Rumen microbiota helps Tibetan sheep obtain energy more efficiently to survive in the extreme environment of the Qinghai–Tibet Plateau
inferred← citeshttps://doi.org/10.3389/fmicb.2025.1492742openalex-snapshot
Variations in rumen microbiota and host genome impacted feed efficiency in goat breeds
inferred← citeshttps://doi.org/10.3389/fmicb.2026.1795452openalex-snapshot
Insights from the high-altitude animal gut adaptation model: mechanisms of obesity regulation via microbiota-derived metabolite homeostasis and the gut-X axis
inferred← citeshttps://doi.org/10.3389/fmicb.2026.1802596openalex-snapshot
Age influences serum immune indices and gut microbiota composition in adult broilers
inferred← citeshttps://doi.org/10.3389/frmbi.2023.1272625openalex-snapshot
Roughage quality determines the production performance of post-weaned Hu sheep via altering ruminal fermentation, morphology, microbiota, and the global methylome landscape of the rumen wall
inferred← citeshttps://doi.org/10.3389/frmbi.2024.1473076openalex-snapshot
Bovine reproductive tract and microbiome dynamics: current knowledge, challenges, and its potential to enhance fertility in dairy cows
inferred← citeshttps://doi.org/10.3389/frmbi.2025.1589484openalex-snapshot
Dietary Codonopsis pilosula polysaccharides promote gut health and enhance immunity in Hu sheep
inferred← citeshttps://doi.org/10.3389/fvets.2020.00251openalex-snapshot
Rumen Microbiota Distribution Analyzed by High-Throughput Sequencing After Oral Doxycycline Administration in Beef Cattle
inferred← citeshttps://doi.org/10.3389/fvets.2023.1181426openalex-snapshot
Effects of increasing levels of lasalocid supplementation on growth performance, serum biochemistry, ruminal fermentation profile, in vitro nutrient digestibility, and gas production of growing goats
inferred← citeshttps://doi.org/10.3389/fvets.2023.1324937openalex-snapshot
Versatile, vigilance, and gut microbiome support the priority of high-ranking hens
inferred← citeshttps://doi.org/10.3390/agriculture11070572openalex-snapshot
Effect of Red Orange and Lemon Extract-Enriched Diet in Suckling Lambs’ Fecal Microbiota
inferred← citeshttps://doi.org/10.3390/ani10061030openalex-snapshot
Chemical Composition of Milk and Rumen Microbiome Diversity of Yak, Impacting by Herbage Grown at Different Phenological Periods on the Qinghai-Tibet Plateau
inferred← citeshttps://doi.org/10.3390/ani11082243openalex-snapshot
Bacterial Community Characteristics in the Gastrointestinal Tract of Yak (Bos grunniens) Fully Grazed on Pasture of the Qinghai-Tibetan Plateau of China
inferred← citeshttps://doi.org/10.3390/ani11092705openalex-snapshot
Ruminal and Fecal Bacteriome of Dairy Calves Fed Different Levels and Sources of NDF
inferred← citeshttps://doi.org/10.3390/ani12121564openalex-snapshot
The Microbiota and Cytokines Correlation between the Jejunum and Colon in Altay Sheep
inferred← citeshttps://doi.org/10.3390/ani12192591openalex-snapshot
Silage Mixtures of Alfalfa with Sweet Sorghum Alter Blood and Rumen Physiological Status and Rumen Microbiota of Karakul Lambs
inferred← citeshttps://doi.org/10.3390/ani13050782openalex-snapshot
Influence of Parturition on Rumen Bacteria and SCFAs in Holstein Cows Based on 16S rRNA Sequencing and Targeted Metabolomics
inferred← citeshttps://doi.org/10.3390/ani13223583openalex-snapshot
Gut Microbiome Profiling of the Endangered Southern Greater Glider (Petauroides volans) after the 2019–2020 Australian Megafire
inferred← citeshttps://doi.org/10.3390/ani14121748openalex-snapshot
Comparative Study of Bacterial Microbiota Differences in the Rumen and Feces of Xinjiang Brown and Holstein Cattle
inferred← citeshttps://doi.org/10.3390/ani14223329openalex-snapshot
Effect of Oat Hay as a Substitute for Alfalfa Hay on the Gut Microbiome and Metabolites of Yak Calves
inferred← citeshttps://doi.org/10.3390/ani15182652openalex-snapshot
Effects of Fermentation and Enzymatic Hydrolysis of Cottonseed Protein on Rumen Fermentation Characteristics, Intestinal Barrier Function, and Hepatic Metabolism in Suckling Lambs
inferred← citeshttps://doi.org/10.3390/ani16060970openalex-snapshot
Coated Betaine Improves Lamb Meat Quality and Flavor by Modulating Rumen Microbial Flora
inferred← citeshttps://doi.org/10.3390/ani16193002openalex-snapshot
Effects of Rumen-Protected Glycine and Methionine Supplementation in a Low-Protein Diet on Growth and Development, Slaughter Performance, Meat Quality, and Rumen Microflora of Yudong Black Goats
inferred← citeshttps://doi.org/10.3390/ani9010004openalex-snapshot
Effects of Saccharomyces Cerevisiae Fermentation Products on the Microbial Community throughout the Gastrointestinal Tract of Calves
inferred← citeshttps://doi.org/10.3390/applmicrobiol4010006openalex-snapshot
Growth and Metabolism of Clostridioides difficile in Hungate-Style Media
inferred← citeshttps://doi.org/10.3390/biology15171526openalex-snapshot
Effects of Rumen-Protected Glucose in Diets and Rumen-Protected Taurine Supplementation on the Colonic Mucosal Barrier in Yaks
inferred← citeshttps://doi.org/10.3390/fermentation11020053openalex-snapshot
Effects of Artemisia argyi Aqueous Extract on Rumen Fermentation Parameters and Microbiota in Lambs
inferred← citeshttps://doi.org/10.3390/fermentation8090434openalex-snapshot
Enteric Methane Emission, Rumen Fermentation and Microbial Profiles of Meat-Master Lambs Supplemented with Barley Fodder Sprouts
inferred← citeshttps://doi.org/10.3390/fermentation8100507openalex-snapshot
Effects of Different Forage Types on Rumen Fermentation, Microflora, and Production Performance in Peak-Lactation Dairy Cows
inferred← citeshttps://doi.org/10.3390/fermentation9030215openalex-snapshot
High-Grain Diet Feeding Altered Blood Metabolites, Rumen Microbiome, and Metabolomics of Yaks
inferred← citeshttps://doi.org/10.3390/fermentation9030256openalex-snapshot
Effect of Dioscorea Opposite Waste Supplementation on Antioxidant Capacity, Immune Response and Rumen Microbiome in Weaned Lambs
inferred← citeshttps://doi.org/10.3390/jof7070559openalex-snapshot
Longitudinal Characterization of the Gut Bacterial and Fungal Communities in Yaks
inferred← citeshttps://doi.org/10.3390/microorganisms10112269openalex-snapshot
In Situ Rumen Degradation Characteristics and Bacterial Colonization of Corn Silages Differing in Ferulic and p-Coumaric Acid Contents
inferred← citeshttps://doi.org/10.3390/microorganisms11010208openalex-snapshot
Response of Intestinal Microbiota of Tiger Puffer (Takifugu rubripes) to the Fish Oil Finishing Strategy
inferred← citeshttps://doi.org/10.3390/microorganisms12112123openalex-snapshot
Dynamics of Fermentation Parameters and Bacterial Community in Rumen of Calves During Dietary Protein Oscillation
inferred← citeshttps://doi.org/10.3390/microorganisms6030094openalex-snapshot
Conservation Implications of Shifting Gut Microbiomes in Captive-Reared Endangered Voles Intended for Reintroduction into the Wild
inferred← citeshttps://doi.org/10.3390/microorganisms9122625openalex-snapshot
The Impact of Pre-Slaughter Fasting on the Ruminal Microbial Population of Commercial Angus Steers
inferred← citeshttps://doi.org/10.3390/ruminants6020044openalex-snapshot
Effect of Coconut Oil Supplementation on Productive Performance, Fermentation Dynamics, Ruminal Microbiota, and Gene Expression in Grazing Calves
inferred← citeshttps://doi.org/10.3390/vetsci12050438openalex-snapshot
Variations in Intestinal Microbiota Among Three Species in the Cervidae Family Under the Same Feeding Conditions
inferred← citeshttps://doi.org/10.3844/ajassp.2014.127.136openalex-snapshot
IDENTIFICATION, MOLECULAR CHARACTERIZATION AND EVALUATION OF SOME RUMINAL BACTERIA THAT CATALYZE AND DEGRADE PLANT CELLULOSIC MATERIALS
inferred← citeshttps://doi.org/10.4137/bbi.s15389openalex-snapshot
High-throughput Methods Redefine the Rumen Microbiome and Its Relationship with Nutrition and Metabolism
inferred← citeshttps://doi.org/10.5187/jast.2023.e109openalex-snapshot
Effects of diets for three growing stages by rumen inocula donors on in vitro rumen fermentation and microbiome
inferred← citeshttps://doi.org/10.53846/goediss-7412openalex-snapshot
Interrelations between feed, host and rumen microbiota in dairy cows
inferred← citeshttps://doi.org/10.5713/ab.22.0215openalex-snapshot
Comparison of rectum fecal bacterial community of finishing bulls fed high-concentrate diets with active dry yeast and yeast culture supplementation
inferred← citeshttps://doi.org/10.5713/ajas.15.0091openalex-snapshot
Effects of Nitrate Addition on Rumen Fermentation, Bacterial Biodiversity and Abundance
inferred← citeshttps://doi.org/10.5713/ajas.16.0469openalex-snapshot
The effect of calcium propionate on the ruminal bacterial community composition in finishing bulls
inferred← citeshttps://doi.org/10.6090/jarq.55.69openalex-snapshot
Comparative Analysis of Rumen Bacteria between Water Buffalo and Cattle Fed the Same Diet during their Fattening Period in the Philippines
inferred← citeshttps://doi.org/10.7287/peerj.15789v0.1/reviews/1openalex-snapshot
Peer Review #1 of "Comparative analysis of the fecal microbiota of healthy and injured common kestrel (Falco tinnunculus) from the Beijing Raptor Rescue Center (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.15789v0.1/reviews/2openalex-snapshot
Peer Review #2 of "Comparative analysis of the fecal microbiota of healthy and injured common kestrel (Falco tinnunculus) from the Beijing Raptor Rescue Center (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.15789v0.1/reviews/3openalex-snapshot
Peer Review #3 of "Comparative analysis of the fecal microbiota of healthy and injured common kestrel (Falco tinnunculus) from the Beijing Raptor Rescue Center (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.15789v0.2/reviews/1openalex-snapshot
Peer Review #1 of "Comparative analysis of the fecal microbiota of healthy and injured common kestrel (Falco tinnunculus) from the Beijing Raptor Rescue Center (v0.2)"
inferred← citeshttps://doi.org/10.7287/peerj.15789v0.2/reviews/2openalex-snapshot
Peer Review #2 of "Comparative analysis of the fecal microbiota of healthy and injured common kestrel (Falco tinnunculus) from the Beijing Raptor Rescue Center (v0.2)"
inferred← citeshttps://doi.org/10.7287/peerj.15789v0.2/reviews/3openalex-snapshot
Peer Review #3 of "Comparative analysis of the fecal microbiota of healthy and injured common kestrel (Falco tinnunculus) from the Beijing Raptor Rescue Center (v0.2)"
inferred← citeshttps://doi.org/10.7287/peerj.9970v0.1/reviews/1openalex-snapshot
Peer Review #1 of "The gut microbiota in the common kestrel (Falco tinnunculus): a report from the Beijing Raptor Rescue Center (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.9970v0.1/reviews/2openalex-snapshot
Peer Review #2 of "The gut microbiota in the common kestrel (Falco tinnunculus): a report from the Beijing Raptor Rescue Center (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.9970v0.1/reviews/3openalex-snapshot
Peer Review #3 of "The gut microbiota in the common kestrel (Falco tinnunculus): a report from the Beijing Raptor Rescue Center (v0.1)"
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