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Microbial utilization of rice root exudates: 13C labeling and PLFA composition

https://doi.org/10.1007/s00374-016-1101-0
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Outgoing claims: the papers this work cites, builds on, or argues with.

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Carbon input by plants into the soil. Review
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Physicochemical and Environmental Plant Physiology
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13C fractionation at the root–microorganisms–soil interface: A review and outlook for partitioning studies
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Spatial variation of active microbiota in the rice rhizosphere revealed by in situ stable isotope probing of phospholipid fatty acids
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Culturing captures members of the soil rare biosphere
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Rhizodeposition shapes rhizosphere microbial community structure in organic soil
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High temporal resolution tracing of photosynthate carbon from the tree canopy to forest soil microorganisms
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13C pulse‐labeling assessment of the community structure of active fungi in the rhizosphere of a genetically starch‐modified potato (Solanum tuberosum) cultivar and its parental isoline
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The impact of different soil parameters on the community structure of dominant bacteria from nine different soils located on Livingston Island, South Shetland Archipelago, Antarctica
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Lithium, Sodium, and Potassium
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Phosphorus
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Nitrogen—Inorganic Forms
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Cation Exchange Capacity
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Short-term natural δ 13 C and δ 18 O variations in pools and fluxes in a beech forest: the transfer of isotopic signal from recent photosynthates to soil respired CO 2

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Successive mineral nitrogen or phosphorus fertilization alone significantly altered bacterial community rather than bacterial biomass in plantation soil
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Rice rhizodeposition and its utilization by microbial groups depends on N fertilization
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Rice rhizodeposition and carbon stabilisation in paddy soil are regulated via drying-rewetting cycles and nitrogen fertilisation
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Nitrogen fertilization increases rhizodeposit incorporation into microbial biomass and reduces soil organic matter losses
inferred← citeshttps://doi.org/10.1007/s00374-017-1221-1openalex-snapshot
Effect of P stoichiometry on the abundance of nitrogen-cycle genes in phosphorus-limited paddy soil
inferred← citeshttps://doi.org/10.1007/s00374-017-1237-6openalex-snapshot
Utilisation of mucilage C by microbial communities under drought
inferred← citeshttps://doi.org/10.1007/s00374-018-1284-7openalex-snapshot
Microbial CO2 assimilation is not limited by the decrease in autotrophic bacterial abundance and diversity in eroded watershed
inferred← citeshttps://doi.org/10.1007/s00374-020-01468-7openalex-snapshot
C:N:P stoichiometry regulates soil organic carbon mineralization and concomitant shifts in microbial community composition in paddy soil
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Divergent mineralization of hydrophilic and hydrophobic organic substrates and their priming effect in soils depending on their preferential utilization by bacteria and fungi
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Contrasting response of organic carbon mineralisation to iron oxide addition under conditions of low and high microbial biomass in anoxic paddy soil
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Biochar decreased rhizodeposits stabilization via opposite effects on bacteria and fungi: diminished fungi-promoted aggregation and enhanced bacterial mineralization
inferred← citeshttps://doi.org/10.1007/s00374-021-01549-1openalex-snapshot
Newly assimilated carbon allocation in grassland communities under different grazing enclosure times
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Bacterial necromass determines the response of mineral-associated organic matter to elevated CO2
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Linking microbial community dynamics to rhizosphere carbon flow depend on arbuscular mycorrhizae and nitrogen fertilization
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Microorganisms maintain C:N stoichiometric balance by regulating the priming effect in long-term fertilized soils
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Response of microbial community composition and function to emergent plant rhizosphere of a constructed wetland in northern China
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Vertical and horizontal shifts in the microbial community structure of paddy soil under long-term fertilization regimes
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inferred← citeshttps://doi.org/10.1016/j.apsoil.2023.104957openalex-snapshot
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Long-term fertilization affects microbial necromass accumulation by regulating nutrient and enzymatic stoichiometry in a calcareous Fluvisol
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Vegetation restoration limited microbial carbon sequestration in areas affected by soil erosion
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Converting paddy to upland alters soil neutral sugars by influencing microbial community and life history strategy
inferred← citeshttps://doi.org/10.1016/j.biocontrol.2019.104080openalex-snapshot
Efficacy of plant growth promoting bacteria Bacillus amyloliquefaciens B9601-Y2 for biocontrol of southern corn leaf blight
inferred← citeshttps://doi.org/10.1016/j.catena.2017.03.011openalex-snapshot
Rainfall pulses modify soil carbon emission in a semiarid desert
inferred← citeshttps://doi.org/10.1016/j.eja.2022.126631openalex-snapshot
Trash management and Trichoderma harzianum influencing photosynthesis, soil carbon sequestration, and growth and yield of sugarcane ratoon in subtropical India
inferred← citeshttps://doi.org/10.1016/j.ejsobi.2023.103487openalex-snapshot
Long-term different fertilization regimes impact on the fate of root-derived C and microbial community structure in paddy soil
inferred← citeshttps://doi.org/10.1016/j.envexpbot.2026.106476openalex-snapshot
Photosynthetic C influenced root-microbe interactions that underpinned high phosphorus acquisition by tomato in straw-amended, phosphorus-limited soil
inferred← citeshttps://doi.org/10.1016/j.envint.2020.106068openalex-snapshot
Microbial functional genes commonly respond to elevated carbon dioxide
inferred← citeshttps://doi.org/10.1016/j.envpol.2019.113670openalex-snapshot
The effect of an antimony resistant bacterium on the iron plaque fraction and antimony uptake by rice seedlings
inferred← citeshttps://doi.org/10.1016/j.geoderma.2018.11.040openalex-snapshot
Initial utilization of rhizodeposits with rice growth in paddy soils: Rhizosphere and N fertilization effects
inferred← citeshttps://doi.org/10.1016/j.geoderma.2020.114683openalex-snapshot
Effects of warming and rainfall pulses on soil respiration in a biological soil crust-dominated desert ecosystem
inferred← citeshttps://doi.org/10.1016/j.geoderma.2021.115561openalex-snapshot
Photosynthesis regulates the diel hysteresis pattern between soil respiration and soil temperature in a steppe grassland
inferred← citeshttps://doi.org/10.1016/j.geoderma.2022.115947openalex-snapshot
Contribution of rhizodeposit associated microbial groups to SOC varies with maize growth stages
inferred← citeshttps://doi.org/10.1016/j.geoderma.2023.116444openalex-snapshot
Nitrogen addition decreases the soil cumulative priming effect and favours soil net carbon gains in Robinia pseudoacacia plantation soil
inferred← citeshttps://doi.org/10.1016/j.jenvman.2025.124551openalex-snapshot
Effect of root exudation on community structure of rhizosphere microorganism of three macrophytes during treating swine wastewater
inferred← citeshttps://doi.org/10.1016/j.jhazmat.2023.130992openalex-snapshot
Speciation and distribution of chromium (III) in rice root tip and mature zone: The significant impact of root exudation and iron plaque on chromium bioavailability
inferred← citeshttps://doi.org/10.1016/j.jhazmat.2024.133540openalex-snapshot
Effects of microplastics on photosynthesized C allocation in a rice-soil system and its utilization by soil microbial groups
inferred← citeshttps://doi.org/10.1016/j.jia.2023.01.007openalex-snapshot
Colonization by Klebsiella variicola FH-1 stimulates soybean growth and alleviates the stress of Sclerotinia sclerotiorum
inferred← citeshttps://doi.org/10.1016/j.plaphy.2026.111037openalex-snapshot
Rhizosphere dynamics of heavy metals during phytoremediation of multi-metal contaminated soil by Celosia argentea
inferred← citeshttps://doi.org/10.1016/j.rhisph.2018.06.004openalex-snapshot
Sampling root exudates – Mission impossible?
inferred← citeshttps://doi.org/10.1016/j.rhisph.2019.100145openalex-snapshot
Biogeochemical cycles of key elements in the paddy-rice rhizosphere: Microbial mechanisms and coupling processes
inferred← citeshttps://doi.org/10.1016/j.rhisph.2026.101326openalex-snapshot
Root exudate-driven rhizosphere engineering: Integrating microbial community design and nanotechnology for sustainable agriculture
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2021.148793openalex-snapshot
Biochar protects hydrophilic dissolved organic matter against mineralization and enhances its microbial carbon use efficiency
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2023.165665openalex-snapshot
Vegetation restoration altered the soil organic carbon composition and favoured its stability in a Robinia pseudoacacia plantation
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2024.172635openalex-snapshot
Long-term vegetation restoration promotes lignin phenol preservation and microbial anabolism in forest plantations: Implications for soil organic carbon dynamics
inferred← citeshttps://doi.org/10.1016/j.soilbio.2019.02.019openalex-snapshot
Carbon input and allocation by rice into paddy soils: A review
inferred← citeshttps://doi.org/10.1016/j.soilbio.2019.03.031openalex-snapshot
Interaction of fertilization and soil water status determine C partitioning in a sedge wetland
inferred← citeshttps://doi.org/10.1016/j.soilbio.2019.107581openalex-snapshot
Fate of photosynthesized carbon as regulated by long–term tillage management in a dryland wheat cropping system
inferred← citeshttps://doi.org/10.1016/j.soilbio.2019.107684openalex-snapshot
Leaching of organic carbon from grassland soils under anaerobiosis
inferred← citeshttps://doi.org/10.1016/j.soilbio.2020.107879openalex-snapshot
Preferential uptake of hydrophilic and hydrophobic compounds by bacteria and fungi in upland and paddy soils
inferred← citeshttps://doi.org/10.1016/j.soilbio.2022.108669openalex-snapshot
Stoichiometric regulation of priming effects and soil carbon balance by microbial life strategies
inferred← citeshttps://doi.org/10.1016/j.soilbio.2023.108996openalex-snapshot
Long-term fertilizer postponing increases soil carbon sequestration by changing microbial composition in paddy soils: A 13CO2 labelling and PLFA study
inferred← citeshttps://doi.org/10.1016/j.soilbio.2025.109992openalex-snapshot
Bacterial necromass decomposition and priming effects in paddy soils depend on long-term fertilization
inferred← citeshttps://doi.org/10.1016/j.still.2021.105077openalex-snapshot
Dynamics and influencing factors of soluble organic nitrogen in paddy soil under different long-term fertilization treatments
inferred← citeshttps://doi.org/10.1016/j.still.2024.106005openalex-snapshot
Decreased microbial phylogenetic diversity and community stability due to less bioavailable carbon and greater oxygen supply in Mollisols along a cultivation chronosequence
inferred← citeshttps://doi.org/10.1016/j.stress.2024.100455openalex-snapshot
The application of Trichoderma spp., an old but new useful fungus, in sustainable soil health intensification: A comprehensive strategy for addressing challenges
inferred← citeshttps://doi.org/10.1016/j.watres.2026.126787openalex-snapshot
Root exudates stabilize denitrification yet amplify CO2 emissions by priming effect in constructed wetlands
inferred← citeshttps://doi.org/10.1021/acs.est.5c16652openalex-snapshot
Mechanistic Microbial Death Pathways Improve Regional Soil Carbon Simulations across Diverse Cropland Ecosystems
inferred← citeshttps://doi.org/10.1080/09064710.2021.2011394openalex-snapshot
Effect of long-term fertilisation on enzyme activities and microbial community composition in the rice rhizosphere
inferred← citeshttps://doi.org/10.1093/femsec/fix154openalex-snapshot
Irrigation management and phosphorus addition alter the abundance of carbon dioxide-fixing autotrophs in phosphorus-limited paddy soil
inferred← citeshttps://doi.org/10.1093/femsec/fiz040openalex-snapshot
Microbiomes inhabiting rice roots and rhizosphere
inferred← citeshttps://doi.org/10.1111/1462-2920.15633openalex-snapshot
Screening and activity assessing of phosphorus availability improving microorganisms associated with bamboo rhizosphere in subtropical China
inferred← citeshttps://doi.org/10.1111/ejss.12811openalex-snapshot
Effect of nitrogen fertilizer on rice photosynthate allocation and carbon input in paddy soil
inferred← citeshttps://doi.org/10.1111/sum.12762openalex-snapshot
Soil amendments for sustainable agriculture: Microbial organic fertilizers
inferred← citeshttps://doi.org/10.1128/aem.02151-19openalex-snapshot
DNA Stable-Isotope Probing Delineates Carbon Flows from Rice Residues into Soil Microbial Communities Depending on Fertilization
inferred← citeshttps://doi.org/10.1139/cjss-2018-0008openalex-snapshot
Carbon allocation and fate in paddy soil depending on phosphorus fertilization and water management: results of 13C continuous labelling of rice
inferred← citeshttps://doi.org/10.1371/journal.pone.0200007openalex-snapshot
Changes in rhizosphere microbial communities in potted cucumber seedlings treated with syringic acid
inferred← citeshttps://doi.org/10.21203/rs.3.rs-1543023/v1openalex-snapshot
Rice genotypes significantly affect nitrification inhibition activity in the rhizosphere
inferred← citeshttps://doi.org/10.21203/rs.3.rs-1864693/v1openalex-snapshot
Microbiome analysis of rice rhizospheric soil in different growth stages using high-throughput amplicon sequencing of 16S rRNA genes
inferred← citeshttps://doi.org/10.2139/ssrn.4902339openalex-snapshot
Effect of the Addition of Diverse Artificial Root Exudates on Soil Microbial Communities and Nitrogen Cycling Processes in Volcanic Ash Soil of Cool-Temperate Forest
inferred← citeshttps://doi.org/10.22541/au.159863392.27085929openalex-snapshot
Variation in microbial biomass and community composition based on long-term fertilization regimes in paddy soil profiles
inferred← citeshttps://doi.org/10.24036/0202262119346-0-00openalex-snapshot
Prospecting the roles of Trichoderma in sustainable crop production: biotechnological developments and future prospects
inferred← citeshttps://doi.org/10.31080/asag.2022.06.1184openalex-snapshot
Biocontrol Potential and Mode of Action of Trichoderma Against Fungal Plant Diseases
inferred← citeshttps://doi.org/10.3389/fmicb.2016.01840openalex-snapshot
Impacts of Fertilization Regimes on Arbuscular Mycorrhizal Fungal (AMF) Community Composition Were Correlated with Organic Matter Composition in Maize Rhizosphere Soil
inferred← citeshttps://doi.org/10.3389/fmicb.2018.00864openalex-snapshot
Insight Into the Variation of Bacterial Structure in Atrazine-Contaminated Soil Regulating by Potential Phytoremediator: Pennisetum americanum (L.) K. Schum
inferred← citeshttps://doi.org/10.3389/fmicb.2020.594890openalex-snapshot
Soil Organic Carbon Attenuates the Influence of Plants on Root-Associated Bacterial Community
inferred← citeshttps://doi.org/10.3389/fmicb.2022.1004836openalex-snapshot
Co-analysis of cucumber rhizosphere metabolites and microbial PLFAs under excessive fertilization in solar greenhouse
inferred← citeshttps://doi.org/10.3389/fmicb.2026.1971411openalex-snapshot
Long-term peanut cultivation alters soil organic C stocks and aggregate stability: insights from coupled iron oxide, microbial, and lignin phenol analyses
inferred← citeshttps://doi.org/10.3390/agriculture14030445openalex-snapshot
Trends in Soil Science over the Past Three Decades (1992–2022) Based on the Scientometric Analysis of 39 Soil Science Journals
inferred← citeshttps://doi.org/10.3390/agriculture16161699openalex-snapshot
Manure–Straw Substitution Promotes Microbial Necromass Carbon Accumulation Alongside Soil Stoichiometric and Microbial Community Shifts in Open-Field Vegetable Soils
inferred← citeshttps://doi.org/10.3390/agronomy16141350openalex-snapshot
Effects of Microbial Inoculant Application on the Decomposition of Organic Materials and the Priming Effect in Sandy Soils
inferred← citeshttps://doi.org/10.3390/f13091352openalex-snapshot
Organic Mulching Increases Microbial Activity in Urban Forest Soil
inferred← citeshttps://doi.org/10.3390/ijms17081205openalex-snapshot
Effects of Secondary Plant Metabolites on Microbial Populations: Changes in Community Structure and Metabolic Activity in Contaminated Environments
inferred← citeshttps://doi.org/10.3390/ijms26083884openalex-snapshot
The Role of Phytohormones in Mediating Drought Stress Responses in Populus Species
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