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Formation of the chordamesoderm in the amphioxus embryo: Analysis with Brachyury and fork head/HNF-3 genes

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/j.1460-2075.1995.tb00158.xopenalex-snapshot
The T protein encoded by Brachyury is a tissue‐specific transcription factor.
inferredcites →https://doi.org/10.1002/jez.1400700306openalex-snapshot
Development of the short‐tailed mutant in the house mouse
inferredcites →https://doi.org/10.1002/jmor.1050540103openalex-snapshot
The embryology of amphioxus
inferredcites →https://doi.org/10.1006/abio.1987.9999openalex-snapshot
Single-Step Method of RNA Isolation by Acid Guanidinium Thiocyanate–Phenol–Chloroform Extraction
inferredcites →https://doi.org/10.1006/dbio.1995.1090openalex-snapshot
The Chick Brachyury Gene: Developmental Expression Pattern and Response to Axial Induction by Localized Activin
inferredcites →https://doi.org/10.1006/dbio.1996.0034openalex-snapshot
HoxGenes and Chordate Evolution
inferredcites →https://doi.org/10.1006/dbio.1996.0345openalex-snapshot
The Ascidian Genome Contains Another T-Domain Gene That Is Expressed in Differentiating Muscle and the Tip of the Tail of the Embryo
inferredcites →https://doi.org/10.1006/geno.1994.1191openalex-snapshot
The HNF-3 Gene Family of Transcription Factors in Mice: Gene Structure, cDNA Sequence, and mRNA Distribution
inferredcites →https://doi.org/10.1007/bf00185911openalex-snapshot
The vertebrate tail bud: three germ layers from one tissue
inferredcites →https://doi.org/10.1016/0092-8674(89)90133-5openalex-snapshot
The homeotic gene fork head encodes a nuclear protein and is expressed in the terminal regions of the Drosophila embryo
inferredcites →https://doi.org/10.1016/0092-8674(90)90439-lopenalex-snapshot
The fork head domain: A novel DNA binding motif of eukaryotic transcription factors?
inferredcites →https://doi.org/10.1016/0092-8674(91)90573-hopenalex-snapshot
Expression of a xenopus homolog of Brachyury (T) is an immediate-early response to mesoderm induction
inferredcites →https://doi.org/10.1016/0092-8674(94)90176-7openalex-snapshot
HNF-3β as a regulator of floor plate development
inferredcites →https://doi.org/10.1016/0092-8674(94)90522-3openalex-snapshot
HNF-3β is essential for node and notochord formation in mouse development
inferredcites →https://doi.org/10.1016/0092-8674(94)90523-1openalex-snapshot
The winged-helix transcription factor HNF-3β is required for notochord development in the mouse embryo
inferredcites →https://doi.org/10.1016/0168-9525(90)90011-topenalex-snapshot
The T genes in embryogenesis
inferredcites →https://doi.org/10.1016/0925-4773(93)90060-bopenalex-snapshot
Sequential expression of HNF-3β and HNF-3α by embryonic organizing centers: the dorsal lip/node, notochord and floor plate
inferredcites →https://doi.org/10.1016/0925-4773(96)00539-4openalex-snapshot
Five years on the wings of fork head
inferredcites →https://doi.org/10.1016/s0168-9525(00)89106-4openalex-snapshot
Chasing tails in ascidians: developmental insights into the origin and evolution of chordates
inferredcites →https://doi.org/10.1016/s0925-4773(96)00608-9openalex-snapshot
Spatial expression of a forkhead homologue in the sea urchin embryo
inferredcites →https://doi.org/10.1016/s1044-5781(06)80002-2openalex-snapshot
The mouse Brachyury (T) gene
inferredcites →https://doi.org/10.1038/364582b0openalex-snapshot
Function of vertebrate T gene
inferredcites →https://doi.org/10.1038/370563a0openalex-snapshot
Archetypal organization of the amphioxus Hox gene cluster
inferredcites →https://doi.org/10.1038/378150a0openalex-snapshot
A homeobox gene essential for zebrafish notochord development
inferredcites →https://doi.org/10.1046/j.1440-169x.1995.t01-3-00006.xopenalex-snapshot
Spatial expression of the amphioxus homologue of Brachyury (T) gene during early embryogenesis of Branchiostoma belcheri
inferredcites →https://doi.org/10.1073/pnas.90.22.10421openalex-snapshot
Hepatocyte nuclear factor 3/fork head or "winged helix" proteins: a family of transcription factors of diverse biologic function.
inferredcites →https://doi.org/10.1073/pnas.91.5.1801openalex-snapshot
Details of the evolutionary history from invertebratesto vertebrates, as deduced from the sequences of 18S rDNA.
inferredcites →https://doi.org/10.1083/jcb.12.3.646openalex-snapshot
FINE STRUCTURE OF THE NOTOCHORD OF AMPHIOXUS
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040454openalex-snapshot
The neighbor-joining method: a new method for reconstructing phylogenetic trees.
inferredcites →https://doi.org/10.1101/gad.5.3.416openalex-snapshot
Hepatocyte nuclear factor 3 alpha belongs to a gene family in mammals that is homologous to the Drosophila homeotic gene fork head.
inferredcites →https://doi.org/10.1101/gad.7.7b.1436openalex-snapshot
Axial, a zebrafish gene expressed along the developing body axis, shows altered expression in cyclops mutant embryos.
inferredcites →https://doi.org/10.1101/gad.8.18.2137openalex-snapshot
Homologs of the mouse Brachyury gene are involved in the specification of posterior terminal structures in Drosophila, Tribolium, and Locusta.
inferredcites →https://doi.org/10.1111/j.1440-169x.1994.00009.xopenalex-snapshot
An Ascidian Homolog of the Mouse Brachyury (T) Gene is Expressed Exclusively in Notochord Cells at the Fate Restricted Stage
inferredcites →https://doi.org/10.1111/j.1558-5646.1985.tb00420.xopenalex-snapshot
CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP
inferredcites →https://doi.org/10.1159/000147529openalex-snapshot
Cranial and Spinal Nerve Organization in Amphioxus and Lampreys: Evidence for an Ancestral Craniate Pattern
inferredcites →https://doi.org/10.1242/dev.116.1.81openalex-snapshot
Pintallavis, a gene expressed in the organizer and midline cells of frog embryos: involvement in the development of the neural axis
inferredcites →https://doi.org/10.1242/dev.116.3.653openalex-snapshot
An amphioxus homeobox gene: sequence conservation, spatial expression during development and insights into vertebrate evolution
inferredcites →https://doi.org/10.1242/dev.116.4.1021openalex-snapshot
The protein product of the zebrafish homologue of the mouse T gene is expressed in nuclei of the germ ring and the notochord of the early embryo
inferredcites →https://doi.org/10.1242/dev.118.1.47openalex-snapshot
Differential expression of multiple fork head related genes during gastrulation and axial pattern formation in the mouse embryo
inferredcites →https://doi.org/10.1242/dev.119.4.991openalex-snapshot
Tail formation as a continuation of gastrulation: the multiple cell populations of the Xenopus tailbud derive from the late blastopore lip
inferredcites →https://doi.org/10.1242/dev.120.5.1191openalex-snapshot
A role for cytoplasmic determinants in mesoderm patterning: cell-autonomous activation of the goosecoid and Xwnt-8 genes along the dorsoventral axis of early Xenopus embryos
inferredcites →https://doi.org/10.1242/dev.121.12.4283openalex-snapshot
Conservation of Brachyury (T) genes in amphioxus and vertebrates: developmental and evolutionary implications
inferredcites →https://doi.org/10.1242/dev.121.9.2747openalex-snapshot
A sea urchin homologue of the chordate Brachyury (T) gene is expressed in the secondary mesenchyme founder cells
inferredcites →https://doi.org/10.1242/dev.1994.supplement.117openalex-snapshot
The evolution of vertebrate gastrulation
inferredcites →https://doi.org/10.1242/dev.1994.supplement.125openalex-snapshot
Gene duplications and the origins of vertebrate development
inferredcites →https://doi.org/10.1360/ya1962-11-6-805openalex-snapshot
EXPERIMENTAL STUDIES ON THE NEURAL INDUCTION IN AMPHIOXUS

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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A mosaic of conserved and novel modes of gene expression and morphogenesis in mesoderm and muscle formation of a larval bivalve
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Blastopore Fate: Amphistomy, Protostomy or Deuterostomy
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Is the early left‐right axis like a plant, a kidney, or a neuron? The integration of physiological signals in embryonic asymmetry
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Brachyury, the blastopore and the evolution of the mesoderm
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Comparative expression analysis of transcription factor genes in the endostyle of invertebrate chordates
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FoxA expression pattern in two polychaete species, Alitta virens and Platynereis dumerilii : Examination of the conserved key regulator of the gut development from cleavage through larval life, postlarval growth, and regeneration
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Conservation of the Developmental Role ofBrachyuryin Notochord Formation in a Urochordate, the AscidianHalocynthia roretzi
inferred← citeshttps://doi.org/10.1006/dbio.2000.9796openalex-snapshot
Genes Expressed in the Amphioxus Notochord Revealed by EST Analysis
inferred← citeshttps://doi.org/10.1006/dbio.2001.0503openalex-snapshot
Heads or Tails? Amphioxus and the Evolution of Anterior–Posterior Patterning in Deuterostomes
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The Molecular Basis of the Gastrula Organizer in Amphibians and Cnidarians
inferred← citeshttps://doi.org/10.1007/978-4-431-65930-3_14openalex-snapshot
Developmental Mechanisms Underlying the Origin and Evolution of Chordates
inferred← citeshttps://doi.org/10.1007/pl00008181openalex-snapshot
Characterization of a hemichordate fork head/HNF-3 gene expression
inferred← citeshttps://doi.org/10.1007/s00427-008-0229-9openalex-snapshot
The Fox genes of Branchiostoma floridae
inferred← citeshttps://doi.org/10.1007/s004270050169openalex-snapshot
Expression of an ascidian gene in the tip of the tail of tail-bud-stage embryos
inferred← citeshttps://doi.org/10.1016/b978-0-12-804042-3.00001-4openalex-snapshot
Invertebrate Origins of Vertebrate Nervous Systems
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Invertebrate Origins of Vertebrate Nervous Systems
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Differential expression pattern of two Brachyury genes in amphioxus embryos
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Left–right asymmetry in embryonic development: a comprehensive review
inferred← citeshttps://doi.org/10.1016/j.mod.2020.103625openalex-snapshot
Brachyury in the gastrula of basal vertebrates
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Characterization of Brachyury genes in the dogfish S. canicula and the lamprey L. fluviatilis. Insights into gastrulation in a chondrichthyan
inferred← citeshttps://doi.org/10.1016/j.ydbio.2004.08.014openalex-snapshot
Analysis of forkhead and snail expression reveals epithelial–mesenchymal transitions during embryonic and larval development of Nematostella vectensis
inferred← citeshttps://doi.org/10.1016/j.ydbio.2009.12.019openalex-snapshot
Highly conserved functions of the Brachyury gene on morphogenetic movements: Insight from the early-diverging phylum Ctenophora
inferred← citeshttps://doi.org/10.1016/j.ydbio.2012.09.007openalex-snapshot
Three-dimensional anatomy of the Ciona intestinalis tailbud embryo at single-cell resolution
inferred← citeshttps://doi.org/10.1016/s0012-1606(03)00244-6openalex-snapshot
Evolution of Brachyury proteins: identification of a novel regulatory domain conserved within Bilateria
inferred← citeshttps://doi.org/10.1016/s0378-1119(98)00608-8openalex-snapshot
Genomic organization and evolution of actin genes in the amphioxus Branchiostoma belcheri and Branchiostoma floridae
inferred← citeshttps://doi.org/10.1016/s0925-4773(00)00395-6openalex-snapshot
The expression of nonchordate deuterostome Brachyury genes in the ascidian Ciona embryo can promote the differentiation of extra notochord cells
inferred← citeshttps://doi.org/10.1016/s0925-4773(97)00162-7openalex-snapshot
Autonomy of ascidian fork head/HNF-3 gene expression
inferred← citeshttps://doi.org/10.1016/s0959-4388(99)00003-3openalex-snapshot
Chordate origins of the vertebrate central nervous system
inferred← citeshttps://doi.org/10.1017/s1464793103006298openalex-snapshot
Developmental mechanism and evolutionary origin of vertebrate left/right asymmetries
inferred← citeshttps://doi.org/10.1038/s41559-018-0641-0openalex-snapshot
Evolution of the bilaterian mouth and anus
inferred← citeshttps://doi.org/10.1038/s41598-023-35979-8openalex-snapshot
The evolutionary history of Brachyury genes in Hydrozoa involves duplications, divergence, and neofunctionalization
inferred← citeshttps://doi.org/10.1046/j.1440-169x.2001.00566.xopenalex-snapshot
Early expressed genes showing a dichotomous developing pattern in the lancelet embryo
inferred← citeshttps://doi.org/10.1046/j.1440-169x.2002.00659.xopenalex-snapshot
β‐Catenin in early development of the lancelet embryo indicates specific determination of embryonic polarity
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Molecular studies of hemichordate development: a key to understanding the evolution of bilateral animals and chordates
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AmphiFoxE4, an amphioxus winged helix/forkhead gene encoding a protein closely related to vertebrate thyroid transcription factor‐2: expression during pharyngeal development
inferred← citeshttps://doi.org/10.1046/j.1525-142x.2003.03051.xopenalex-snapshot
Expression of muscle‐related genes and two MyoD genes during amphioxus notochord development
inferred← citeshttps://doi.org/10.1093/icb/39.3.641openalex-snapshot
The Evolution of Dorsoventral Pattern Formation in the Chordate Neural Tube
inferred← citeshttps://doi.org/10.1098/rsob.160062openalex-snapshot
Acquisition of the dorsal structures in chordate amphioxus
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Evolutionary history of the Brachyury gene in Hydrozoa: duplications, divergence and neofunctionalization
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Are protochordates chordates?
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Development of the annelid axochord: Insights into notochord evolution
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From Notochord Formation to Hereditary Chordoma: The Many Roles of Brachyury
inferred← citeshttps://doi.org/10.1159/000521966openalex-snapshot
Is There a Prechordal Region and an Acroterminal Domain in Amphioxus?
inferred← citeshttps://doi.org/10.1186/s40851-017-0064-9openalex-snapshot
The chordate ancestor possessed a single copy of the Brachyury gene for notochord acquisition
inferred← citeshttps://doi.org/10.1186/s40851-019-0143-1openalex-snapshot
Evolution of cis-regulatory modules for the head organizer gene goosecoid in chordates: comparisons between Branchiostoma and Xenopus
inferred← citeshttps://doi.org/10.1242/dev.02400openalex-snapshot
Axis specification in the spider embryo:dppis required for radial-to-axial symmetry transformation andsogfor ventral patterning
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Evolutionary crossroads in developmental biology: amphioxus
inferred← citeshttps://doi.org/10.1242/dev.126.5.999openalex-snapshot
HyBra1, a Brachyury homologue, acts during head formation in Hydra
inferred← citeshttps://doi.org/10.1242/dev.127.1.187openalex-snapshot
Left-right asymmetric expression of BbPtx, a Ptx-related gene, in a lancelet species and the developmental left-sidedness in deuterostomes
inferred← citeshttps://doi.org/10.1371/journal.pbio.2001573openalex-snapshot
Molecular regionalization of the developing amphioxus neural tube challenges major partitions of the vertebrate brain
inferred← citeshttps://doi.org/10.1387/ijdb.170192msopenalex-snapshot
Keeping amphioxus in the laboratory: an update on available husbandry methods
inferred← citeshttps://doi.org/10.1387/ijdb.170205isopenalex-snapshot
Amphioxus Sp5 is a member of a conserved Specificity Protein complement and is modulated by Wnt/β-catenin signalling
inferred← citeshttps://doi.org/10.1387/ijdb.170259ikopenalex-snapshot
Novel polyclonal antibodies as a useful tool for expression studies in amphioxus embryos
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Mechanisms of Specification in Ascidian Embryos
inferred← citeshttps://doi.org/10.3389/fcell.2021.696875openalex-snapshot
A Preliminary Single-Cell RNA-Seq Analysis of Embryonic Cells That Express Brachyury in the Amphioxus, Branchiostoma japonicum
inferred← citeshttps://doi.org/10.3389/fevo.2015.00080openalex-snapshot
Expression of Fox genes in the cephalochordate Branchiostoma lanceolatum
inferred← citeshttps://doi.org/10.70675/c0a88792zff4cz498az9e29zc450229e62b6openalex-snapshot
Role of the Nodal Signaling pathway in amphioxus neural induction
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Retinoic acid signaling in chordates : the evolutionary history of a morphogen-dependent signaling
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