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Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee

https://doi.org/10.1007/s00705-022-05694-2
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/s00705-019-04477-6openalex-snapshot
Binomial nomenclature for virus species: a consultation
inferredcites →https://doi.org/10.1007/s00705-021-05323-4openalex-snapshot
Differentiating between viruses and virus species by writing their names correctly
inferredcites →https://doi.org/10.1007/s00705-022-05516-5openalex-snapshot
Recent changes to virus taxonomy ratified by the International Committee on Taxonomy of Viruses (2022)
inferredcites →https://doi.org/10.1016/j.chom.2018.10.002openalex-snapshot
Biology and Taxonomy of crAss-like Bacteriophages, the Most Abundant Virus in the Human Gut
inferredcites →https://doi.org/10.1016/j.chom.2020.06.011openalex-snapshot
Bacteroides thetaiotaomicron-Infecting Bacteriophage Isolates Inform Sequence-Based Host Range Predictions
inferredcites →https://doi.org/10.1016/j.coviro.2021.10.011openalex-snapshot
Perspective on taxonomic classification of uncultivated viruses
inferredcites →https://doi.org/10.1016/j.cub.2021.05.014openalex-snapshot
A new family of globally distributed lytic roseophages with unusual deoxythymidine to deoxyuridine substitution
inferredcites →https://doi.org/10.1016/j.virusres.2020.198219openalex-snapshot
crAssphage genomes identified in fecal samples of an adult and infants with evidence of positive genomic selective pressure within tail protein genes
inferredcites →https://doi.org/10.1038/ncomms5498openalex-snapshot
A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes
inferredcites →https://doi.org/10.1038/s41467-018-07225-7openalex-snapshot
ΦCrAss001 represents the most abundant bacteriophage family in the human gut and infects Bacteroides intestinalis
inferredcites →https://doi.org/10.1038/s41467-019-14103-3openalex-snapshot
Acquisition, transmission and strain diversity of human gut-colonizing crAss-like phages
inferredcites →https://doi.org/10.1038/s41564-017-0053-yopenalex-snapshot
Discovery of an expansive bacteriophage family that includes the most abundant viruses from the human gut
inferredcites →https://doi.org/10.1038/s41564-019-0448-zopenalex-snapshot
Evaluation of a concatenated protein phylogeny for classification of tailed double-stranded DNA viruses belonging to the order Caudovirales
inferredcites →https://doi.org/10.1038/s41564-019-0494-6openalex-snapshot
Global phylogeography and ancient evolution of the widespread human gut virus crAssphage
inferredcites →https://doi.org/10.1089/phage.2021.0013openalex-snapshot
Phage Annotation Guide: Guidelines for Assembly and High-Quality Annotation
inferredcites →https://doi.org/10.1089/phage.2021.0015openalex-snapshot
Phage Genome Annotation: Where to Begin and End
inferredcites →https://doi.org/10.1093/bioinformatics/bts613openalex-snapshot
Reference-independent comparative metagenomics using cross-assembly: crAss
inferredcites →https://doi.org/10.1093/bioinformatics/btw711openalex-snapshot
PhagesDB: the actinobacteriophage database
inferredcites →https://doi.org/10.1093/bioinformatics/btx440openalex-snapshot
VICTOR: genome-based phylogeny and classification of prokaryotic viruses
inferredcites →https://doi.org/10.1093/molbev/msn023openalex-snapshot
Reticulate Representation of Evolutionary and Functional Relationships between Phage Genomes
inferredcites →https://doi.org/10.1093/sysbio/syz036openalex-snapshot
Analysis of Spounaviruses as a Case Study for the Overdue Reclassification of Tailed Phages
inferredcites →https://doi.org/10.1099/jgv.0.001110openalex-snapshot
Evaluation of the genomic diversity of viruses infecting bacteria, archaea and eukaryotes using a common bioinformatic platform: steps towards a unified taxonomy
inferredcites →https://doi.org/10.1099/jgv.0.001800openalex-snapshot
Guidance for creating individual and batch latinized binomial virus species names
inferredcites →https://doi.org/10.1099/mgen.0.000686openalex-snapshot
Leviviricetes: expanding and restructuring the taxonomy of bacteria-infecting single-stranded RNA viruses
inferredcites →https://doi.org/10.1101/2021.06.14.448304openalex-snapshot
VirClust – a tool for hierarchical clustering, core gene detection and annotation of (prokaryotic) viruses
inferredcites →https://doi.org/10.1128/genomea.01229-14openalex-snapshot
Genome Sequence of Salmonella Phage χ
inferredcites →https://doi.org/10.1128/jb.184.17.4891-4905.2002openalex-snapshot
Imbroglios of Viral Taxonomy: Genetic Exchange and Failings of Phenetic Approaches
inferredcites →https://doi.org/10.1128/jb.62.3.293-300.1951openalex-snapshot
STUDIES ON LYSOGENESIS I
inferredcites →https://doi.org/10.1128/mbio.00978-16openalex-snapshot
The Double-Stranded DNA Virosphere as a Modular Hierarchical Network of Gene Sharing
inferredcites →https://doi.org/10.1371/journal.pbio.3001442openalex-snapshot
Diversity, taxonomy, and evolution of archaeal viruses of the class Caudoviricetes
inferredcites →https://doi.org/10.3390/v13030506openalex-snapshot
A Roadmap for Genome-Based Phage Taxonomy
inferredcites →https://doi.org/10.3390/v15041007openalex-snapshot
VirClust—A Tool for Hierarchical Clustering, Core Protein Detection and Annotation of (Prokaryotic) Viruses

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inferred← citeshttps://doi.org/10.1016/j.micpath.2025.107921openalex-snapshot
Epseptimavirus KKP3831 – a new species of Salmonella-specific virulent phage: comprehensive biological and genomic characterization and potential for translocation through the intestinal epithelium
inferred← citeshttps://doi.org/10.1016/j.micpath.2025.107950openalex-snapshot
Isolation, characterization, therapeutic potential and depolymerase identification of a lytic bacteriophage Kpp-9 against Klebsiella pneumoniae with capsule serotype K2
inferred← citeshttps://doi.org/10.1016/j.micpath.2025.108274openalex-snapshot
Exploring bacteriophages as potential tools for combating multi drug-resistant Klebsiella pneumoniae: Isolation, characterization, genomic insights, and in vitro evaluation
inferred← citeshttps://doi.org/10.1016/j.micres.2023.127461openalex-snapshot
Acquisition, loss, and replication of functional modules promote the genetic diversity of Salmonella bacteriophages
inferred← citeshttps://doi.org/10.1016/j.micres.2024.127944openalex-snapshot
Coagulase-Negative Staphylococci phages panorama: Genomic diversity and in vitro studies for a therapeutic use
inferred← citeshttps://doi.org/10.1016/j.micres.2025.128320openalex-snapshot
Biological characterization and stability of three lytic wastewater-derived bacteriophages targeting multidrug-resistant Acinetobacter baumannii and A. johnsonii clinical strains
inferred← citeshttps://doi.org/10.1016/j.microb.2025.100505openalex-snapshot
Isolation and preliminary analysis of a lytic bacteriophage infecting Agrobacterium tumefaciens to control bacterial overgrowth during plant transformation
inferred← citeshttps://doi.org/10.1016/j.phage.2026.100010openalex-snapshot
Deciphering the genomic features of four newly isolated polyvalent bacteriophages infecting Pseudomonas coronafaciens pv. garcae: A tale of small beginnings
inferred← citeshttps://doi.org/10.1016/j.psj.2026.106791openalex-snapshot
Tail spike protein evolution enables phage Psm140 to target Salmonella ShdA and overcome host resistance
inferred← citeshttps://doi.org/10.1016/j.rsma.2024.103679openalex-snapshot
Viral diversity and potential threats in residues and ballast water of ballast tanks at Shanghai port
inferred← citeshttps://doi.org/10.1016/j.sbi.2025.103045openalex-snapshot
Comparative anatomy of siphophage tails before and after interaction with their receptor
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2023.168840openalex-snapshot
Assessment of crAssphage as a human fecal source tracking marker in the lower Great Lakes
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2024.174339openalex-snapshot
Eutrophication impacts the distribution and functional traits of viral communities in lakes
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2024.177450openalex-snapshot
Persistence of crAssBcn phages in conditions of natural inactivation and disinfection process and their potential role as human source tracking markers
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2026.182106openalex-snapshot
Response of marine benthic viral communities to anthropogenic disturbances
inferred← citeshttps://doi.org/10.1016/j.str.2025.03.007openalex-snapshot
Structure of the Staphylococcus aureus bacteriophage 80α neck shows details of the DNA, tail completion protein, and tape measure protein
inferred← citeshttps://doi.org/10.1016/j.talanta.2026.129926openalex-snapshot
Rapid electrochemical detection of Escherichia coli in milk using an oriented phage-based biosensor
inferred← citeshttps://doi.org/10.1016/j.tvjl.2026.106598openalex-snapshot
Identification of the biological properties of three novel lytic bacteriophages capable of infecting Bacillus anthracis: Novel members of the class Caudoviricetes
inferred← citeshttps://doi.org/10.1016/j.virol.2024.110016openalex-snapshot
A comparative analysis of phage classification methods in light of the recent ICTV taxonomic revisions
inferred← citeshttps://doi.org/10.1016/j.virol.2024.110100openalex-snapshot
Genomic and biological characterization of bacteriophages against Enterobacter cloacae, a high-priority pathogen
inferred← citeshttps://doi.org/10.1016/j.virol.2024.110101openalex-snapshot
Characterization of vB_SalS_PSa2, a T5-like Demerecviridae bacteriophage, and its potential use in food matrices
inferred← citeshttps://doi.org/10.1016/j.virol.2024.110155openalex-snapshot
Characterization of an Escherichia coli phage Tequatrovirus YZ2 and its application in bacterial wound infection
inferred← citeshttps://doi.org/10.1016/j.virol.2024.110264openalex-snapshot
Characterization of a novel lytic phage against methicillin resistance Staphylococcus aureus in Hainan island
inferred← citeshttps://doi.org/10.1016/j.virol.2026.110859openalex-snapshot
Therapeutic potential of three virulent bacteriophages targeting clinical Enterobacter hormaechei strains: comprehensive biological properties and genomic functional analysis
inferred← citeshttps://doi.org/10.1016/j.virol.2026.110864openalex-snapshot
A genomically unique lytic bacteriophage infecting Pseudomonas syringae pv. actinidiae
inferred← citeshttps://doi.org/10.1016/j.virol.2026.111013openalex-snapshot
Genomic and functional characterization of Bacillus phage BCE1 targeting a key gut bacterium in Aedes albopictus larvae
inferred← citeshttps://doi.org/10.1016/j.virusres.2023.199178openalex-snapshot
Therapeutic effect and anti-biofilm ability assessment of a novel phage, phiPA1-3, against carbapenem-resistant Pseudomonas aeruginosa
inferred← citeshttps://doi.org/10.1016/j.virusres.2023.199184openalex-snapshot
Characterization and genomic analysis of a broad-spectrum lytic phage HZ2201 and its antibiofilm efficacy against Pseudomonas aeruginosa
inferred← citeshttps://doi.org/10.1016/j.virusres.2023.199272openalex-snapshot
Appelmans protocol – A directed in vitro evolution enables induction and recombination of prophages with expanded host range
inferred← citeshttps://doi.org/10.1016/j.virusres.2024.199320openalex-snapshot
Characterization and genomic analysis of a broad-spectrum lytic phage PG288: A potential natural therapy candidate for Vibrio infections
inferred← citeshttps://doi.org/10.1016/j.virusres.2024.199435openalex-snapshot
A novel genus of Pectobacterium bacteriophages display broad host range by targeting several species of Danish soft rot isolates
inferred← citeshttps://doi.org/10.1016/j.virusres.2025.199579openalex-snapshot
Isolation and characterization of a novel bacteriophage ST1749 and its effectiveness against Vibrio parahaemolyticus and Salmonella spp
inferred← citeshttps://doi.org/10.1016/j.virusres.2025.199664openalex-snapshot
Characterisation of newly identified vibriophages and their potential application in the biocontrol of Vibrio parahaemolyticus to enhance safety in aquaculture
inferred← citeshttps://doi.org/10.1016/j.watres.2024.122253openalex-snapshot
Decrypting the viral community in aerobic activated sludge reactors treating antibiotic production wastewater
inferred← citeshttps://doi.org/10.1016/j.watres.2024.122330openalex-snapshot
Development of a novel crAss-like phage detection method with a broad spectrum for microbial source tracking
inferred← citeshttps://doi.org/10.1016/j.watres.2026.127032openalex-snapshot
Metagenomic insights into the global occurrence of ESKAPE-targeting bacteriophages in urban wastewater
inferred← citeshttps://doi.org/10.1016/s1166-8598(23)47345-0openalex-snapshot
10.1016/s1166-8598(23)47345-0
inferred← citeshttps://doi.org/10.1017/s0022029924000384openalex-snapshot
In vitro antimicrobial and antibiofilm activity of phage cocktail against Mammaliicoccus sciuri, a causative agent of bovine mastitis
inferred← citeshttps://doi.org/10.1038/s41467-023-40098-zopenalex-snapshot
Characterization of crAss-like phage isolates highlights Crassvirales genetic heterogeneity and worldwide distribution
inferred← citeshttps://doi.org/10.1038/s41467-024-50777-0openalex-snapshot
Phylogeny and disease associations of a widespread and ancient intestinal bacteriophage lineage
inferred← citeshttps://doi.org/10.1038/s41467-024-53317-yopenalex-snapshot
Seasonal dynamics and diversity of Antarctic marine viruses reveal a novel viral seascape
inferred← citeshttps://doi.org/10.1038/s41467-024-54025-3openalex-snapshot
A metagenomic catalogue of the ruminant gut archaeome
inferred← citeshttps://doi.org/10.1038/s41467-026-73439-9openalex-snapshot
DNA viruses are constrained to ecological niches and share similar environmental adaptations with hosts
inferred← citeshttps://doi.org/10.1038/s41467-026-75836-6openalex-snapshot
A genomic catalog of the mouse gut virome reveals features associated with ageing
inferred← citeshttps://doi.org/10.1038/s41522-024-00554-0openalex-snapshot
Massive expansion of the pig gut virome based on global metagenomic mining
inferred← citeshttps://doi.org/10.1038/s41522-024-00557-xopenalex-snapshot
Host specificity and cophylogeny in the “animal-gut bacteria-phage” tripartite system
inferred← citeshttps://doi.org/10.1038/s41575-025-01134-zopenalex-snapshot
Gut virome dynamics: from commensal to critical player in health and disease
inferred← citeshttps://doi.org/10.1038/s41579-026-01352-5openalex-snapshot
Phage therapy: from basic biology to clinical application
inferred← citeshttps://doi.org/10.1038/s41587-025-02946-9openalex-snapshot
Machine learning enables scalable and systematic hierarchical virus taxonomy
inferred← citeshttps://doi.org/10.1038/s41591-026-04301-0openalex-snapshot
Cross-reactive anti-prophage antibodies and bacterial heteroresistance implicated in phage therapeutic failure
inferred← citeshttps://doi.org/10.1038/s41598-023-38453-7openalex-snapshot
Characterization of a novel and active temperate phage vB_AbaM_ABMM1 with antibacterial activity against Acinetobacter baumannii infection
inferred← citeshttps://doi.org/10.1038/s41598-023-38873-5openalex-snapshot
Viruses participate in the organomineralization of travertines
inferred← citeshttps://doi.org/10.1038/s41598-023-45313-xopenalex-snapshot
Two novel phages PSPa and APPa inhibit planktonic, sessile and persister populations of Pseudomonas aeruginosa, and mitigate its virulence in Zebrafish model
inferred← citeshttps://doi.org/10.1038/s41598-023-46938-8openalex-snapshot
Mitigation of biogenic methanethiol using bacteriophages in synthetic wastewater augmented with Pseudomonas putida
inferred← citeshttps://doi.org/10.1038/s41598-023-47634-3openalex-snapshot
Genome sequence and characterization of Streptomyces phages Vanseggelen and Verabelle, representing two new species within the genus Camvirus
inferred← citeshttps://doi.org/10.1038/s41598-023-48634-zopenalex-snapshot
Genome sequence and characterization of a novel Pseudomonas putida phage, MiCath
inferred← citeshttps://doi.org/10.1038/s41598-023-48788-wopenalex-snapshot
Comparative genomics and proteomics analysis of phages infecting multi-drug resistant Escherichia coli O177 isolated from cattle faeces
inferred← citeshttps://doi.org/10.1038/s41598-024-53317-4openalex-snapshot
Lytic activity of phages against bacterial pathogens infecting diabetic foot ulcers
inferred← citeshttps://doi.org/10.1038/s41598-024-58226-0openalex-snapshot
Discovery and description of novel phage genomes from urban microbiomes sampled by the MetaSUB consortium
inferred← citeshttps://doi.org/10.1038/s41598-024-59065-9openalex-snapshot
Bacteriophages from human skin infecting coagulase-negative Staphylococcus: diversity, novelty and host resistance
inferred← citeshttps://doi.org/10.1038/s41598-024-59903-wopenalex-snapshot
Isolation and characterisation of a novel Silviavirus bacteriophage promising antimicrobial agent against methicillin-resistant Staphylococcus aureus infections
inferred← citeshttps://doi.org/10.1038/s41598-024-67768-2openalex-snapshot
Novel lytic bacteriophage AhFM11 as an effective therapy against hypervirulent Aeromonas hydrophila
inferred← citeshttps://doi.org/10.1038/s41598-024-75998-7openalex-snapshot
Biofilms in modern CaCO3-supersaturated freshwater environments reveal viral proxies
inferred← citeshttps://doi.org/10.1038/s41598-025-01489-yopenalex-snapshot
Phage-antibiotic synergy to combat multidrug resistant strains of Gram-negative ESKAPE pathogens
inferred← citeshttps://doi.org/10.1038/s41598-025-04494-3openalex-snapshot
Characterization of a plasmid dependent DNA phage targeting Escherichia coli harboring a conjugative plasmid and its impact on gut microbiota
inferred← citeshttps://doi.org/10.1038/s41598-025-32942-7openalex-snapshot
Genomic and functional characterization of a novel temperate Coventryvirus phage infecting Staphylococcus pseudintermedius
inferred← citeshttps://doi.org/10.1038/s41598-025-85186-wopenalex-snapshot
The non-nutritive sweetener rebaudioside a enhances phage infectivity
inferred← citeshttps://doi.org/10.1038/s41598-025-85513-1openalex-snapshot
Characterization and genome analysis of a novel phage BP15 infecting Vibrio parahaemolyticus
inferred← citeshttps://doi.org/10.1038/s41598-025-95398-9openalex-snapshot
Characterization and therapeutic potential of newly isolated bacteriophages targeting the most common Salmonella serovars in Europe
inferred← citeshttps://doi.org/10.1038/s41598-026-35899-3openalex-snapshot
Isolation, characterisation and potential applications of a novel bacteriophage targeting beta-lactam-resistant Staphylococcus saprophyticus
inferred← citeshttps://doi.org/10.1038/s41598-026-39563-8openalex-snapshot
Genomic and in vitro characterization of two lytic bacteriophages infecting multidrug-resistant Erwinia sp. strain AnSW2-5
inferred← citeshttps://doi.org/10.1038/s41598-026-44506-4openalex-snapshot
Integrated wet lab and in silico discovery and characterization of bacteriophages with antibiotic synergy against multidrug resistant Acinetobacter baumannii
inferred← citeshttps://doi.org/10.1038/s44298-025-00118-9openalex-snapshot
Gp38 adhesins of Straboviridae phages recognize specific extracellular loops of outer membrane protein receptors
inferred← citeshttps://doi.org/10.1038/s44298-025-00155-4openalex-snapshot
Therapeutic potential of Shigella phage SSG23 against Shigella sonnei biofilms and in BALB/c mice
inferred← citeshttps://doi.org/10.1038/s44454-026-00052-2openalex-snapshot
Phage treatment reduces multidrug resistant Pseudomonas aeruginosa biofilms and sewage pseudomonads
inferred← citeshttps://doi.org/10.1039/9781837072026-00033openalex-snapshot
Phage Biology and Classifications
inferred← citeshttps://doi.org/10.1039/d5nr02249eopenalex-snapshot
Phage–nanomaterial platforms for precision antimicrobial therapy: from design to therapeutic application
inferred← citeshttps://doi.org/10.1042/ebc20220209openalex-snapshot
Functional biology and biotechnology of thermophilic viruses
inferred← citeshttps://doi.org/10.1042/ebc20240012openalex-snapshot
Phage diversity in One Health
inferred← citeshttps://doi.org/10.1073/pnas.2423403122openalex-snapshot
Cryo-EM structure of cyanopodophage A4 reveals a pentameric pre-ejectosome in the double-stabilized capsid
inferred← citeshttps://doi.org/10.1080/09593330.2023.2220886openalex-snapshot
The role of identified and characterized bacteriophage ZCEC13 in controlling pathogenic and multidrug-resistant Escherichia coli in wastewater: in vitro study
inferred← citeshttps://doi.org/10.1080/14787210.2026.2632669openalex-snapshot
Phage therapy: innovations, challenges, and future directions in combating superbugs and antibiotic resistance
inferred← citeshttps://doi.org/10.1080/19490976.2023.2288168openalex-snapshot
Alterations in gut virome are associated with cognitive function and minimal hepatic encephalopathy cross-sectionally and longitudinally in cirrhosis
inferred← citeshttps://doi.org/10.1080/19490976.2023.2298254openalex-snapshot
Isolation and characterization of a novel lytic Parabacteroides distasonis bacteriophage φPDS1 from the human gut
inferred← citeshttps://doi.org/10.1080/19490976.2024.2331520openalex-snapshot
Using a human colonoid-derived monolayer to study bacteriophage translocation
inferred← citeshttps://doi.org/10.1080/19490976.2025.2539450openalex-snapshot
The colonic mucosal virome in inflammatory bowel disease reveals Crassvirales depletion and disease-specific virome features
inferred← citeshttps://doi.org/10.1089/phage.2023.0029openalex-snapshot
Genome Sequence and Characterization of Coliphage Môr Ffagbaw
inferred← citeshttps://doi.org/10.1089/phage.2023.0041openalex-snapshot
The TolC and Lipopolysaccharide-Specific Escherichia coli Bacteriophage TLS—the Tlsvirus Archetype Virus
inferred← citeshttps://doi.org/10.1089/phage.2023.0048openalex-snapshot
Identification and Characterization of Salmonella Phages and Absence of Salmonella Strains from Three Different Study Areas of Cattle Livestock
inferred← citeshttps://doi.org/10.1089/phage.2024.0014openalex-snapshot
Characterization and Genome Analyses of the Novel Phages P2 and vB_AhydM-H1 Targeting Aeromonas hydrophila
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