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Multidomain ribosomal protein trees and the planctobacterial origin of neomura (eukaryotes, archaebacteria)

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Origins of Secondary Metabolism
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Revised Road Map to the Phylum Firmicutes
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Functional Assignment of an Enzyme that Catalyzes the Synthesis of an Archaea‐Type Ether Lipid in Bacteria
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Small GTPases and the evolution of the eukaryotic cell
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Planctomycetes and eukaryotes: A case of analogy not homology
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The evolution of eukaryotic cells from the perspective of peroxisomes
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Combing Chromosomal DNA Mediated by the SMC Complex: Structure and Mechanisms
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Why the Lipid Divide? Membrane Proteins as Drivers of the Split between the Lipids of the Three Domains of Life
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Evolution of intraflagellar transport from coated vesicles and autogenous origin of the eukaryotic cilium
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Cytokinesis in trypanosomes
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Model Structure of the Ompα Rod, a Parallel Four-stranded Coiled Coil from the Hyperthermophilic EubacteriumThermotoga maritima
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Classification and evolution of P-loop GTPases and related ATPases
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Gene Duplication and the Evolution of Group II Chaperonins: Implications for Structure and Function
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The Revised Road Map to the Manual
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Phylum BV. Chrysiogenetes phy. nov.
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Phylum BIX. Deferribacteres phy. nov.
inferredcites →https://doi.org/10.1007/978-0-387-68572-4_1openalex-snapshot
Road map of the phyla Bacteroidetes, Spirochaetes, Tenericutes (Mollicutes), Acidobacteria, Fibrobacteres, Fusobacteria, Dictyoglomi, Gemmatimonadetes, Lentisphaerae, Verrucomicrobia, Chlamydiae, and Planctomycetes
inferredcites →https://doi.org/10.1007/978-0-387-68572-4_6openalex-snapshot
Phylum XVII. Acidobacteria phyl. nov.
inferredcites →https://doi.org/10.1007/978-1-4612-4884-2_43openalex-snapshot
Mutant Studies on the Prokaryotic Ribosome
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Overview of the Diverse Roles of Bacterial and Archaeal Cytoskeletons
inferredcites →https://doi.org/10.1007/978-3-540-38502-8_8openalex-snapshot
The Chimaeric Origin of Mitochondria: Photosynthetic Cell Enslavement, Gene-Transfer Pressure, and Compartmentation Efficiency
inferredcites →https://doi.org/10.1007/978-3-642-30194-0_114openalex-snapshot
What Is a Prokaryote?
inferredcites →https://doi.org/10.1007/978-4-431-68302-5_18openalex-snapshot
The Evolution of Cells
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Archaeal Proteasomes and Sampylation
inferredcites →https://doi.org/10.1007/bf00423318openalex-snapshot
Fervidobacterium islandicum sp. nov., a new extremely thermophilic eubacterium belonging to the ?Thermotogales?
inferredcites →https://doi.org/10.1007/bf00423320openalex-snapshot
Flexistipes sinusarabici, a novel genus and species of eubacteria occurring in the Atlantis II Deep brines of the Red Sea
inferredcites →https://doi.org/10.1007/bf00425185openalex-snapshot
The concept of a bacterium
inferredcites →https://doi.org/10.1007/bf01581588openalex-snapshot
The effects of heavy meteorite bombardment on the early evolution — The emergence of the three Domains of life
inferredcites →https://doi.org/10.1007/bf01796132openalex-snapshot
The concept of cellular evolution
inferredcites →https://doi.org/10.1007/bf02568729openalex-snapshot
A new obligately chemolithoautotrophic, nitrite-oxidizing bacterium, Nitrospira moscoviensis sp. nov. and its phylogenetic relationship
inferredcites →https://doi.org/10.1007/pl00006407openalex-snapshot
The Root of the Universal Tree of Life Inferred from Anciently Duplicated Genes Encoding Components of the Protein-Targeting Machinery
inferredcites →https://doi.org/10.1007/pl00006573openalex-snapshot
The Rooting of the Universal Tree of Life Is Not Reliable
inferredcites →https://doi.org/10.1007/s00018-009-0087-2openalex-snapshot
The evolution, complex structures and function of septin proteins
inferredcites →https://doi.org/10.1007/s00018-011-0740-4openalex-snapshot
Faithful chaperones
inferredcites →https://doi.org/10.1007/s00018-013-1401-6openalex-snapshot
The nucleotide-binding proteins Nubp1 and Nubp2 are negative regulators of ciliogenesis
inferredcites →https://doi.org/10.1007/s00018-015-1980-5openalex-snapshot
A novel family of katanin-like 2 protein isoforms (KATNAL2), interacting with nucleotide-binding proteins Nubp1 and Nubp2, are key regulators of different MT-based processes in mammalian cells
inferredcites →https://doi.org/10.1007/s00203-004-0647-7openalex-snapshot
Thermobaculum terrenum gen. nov., sp. nov.: a non-phototrophic gram-positive thermophile representing an environmental clone group related to the Chloroflexi (green non-sulfur bacteria) and Thermomicrobia
inferredcites →https://doi.org/10.1007/s00203-004-0725-xopenalex-snapshot
Composition of the lipids of Nanoarchaeum equitans and their origin from its host Ignicoccus sp. strain KIN4/I
inferredcites →https://doi.org/10.1007/s00203-013-0915-5openalex-snapshot
Identification of a possible respiratory arsenate reductase in Denitrovibrio acetiphilus, a member of the phylum Deferribacteres
inferredcites →https://doi.org/10.1007/s00203-014-0964-4openalex-snapshot
Comparative proteome analysis of Acidaminococcus intestini supports a relationship between outer membrane biogenesis in Negativicutes and Proteobacteria
inferredcites →https://doi.org/10.1007/s00203-016-1307-4openalex-snapshot
Mariprofundus micogutta sp. nov., a novel iron-oxidizing zetaproteobacterium isolated from a deep-sea hydrothermal field at the Bayonnaise knoll of the Izu-Ogasawara arc, and a description of Mariprofundales ord. nov. and Zetaproteobacteria classis nov.
inferredcites →https://doi.org/10.1007/s00232-017-0012-9openalex-snapshot
Driving Forces of Translocation Through Bacterial Translocon SecYEG
inferredcites →https://doi.org/10.1007/s00239-017-9784-xopenalex-snapshot
Photosystem II is a Chimera of Reaction Centers
inferredcites →https://doi.org/10.1007/s002390010245openalex-snapshot
Obcells as Proto-Organisms: Membrane Heredity, Lithophosphorylation, and the Origins of the Genetic Code, the First Cells, and Photosynthesis
inferredcites →https://doi.org/10.1007/s00606-014-1187-5openalex-snapshot
Phylogenetic analysis of NAP, an unconventional actin of the Volvocales
inferredcites →https://doi.org/10.1007/s00709-005-0135-1openalex-snapshot
Ancient gene duplications and the root(s) of the tree of life
inferredcites →https://doi.org/10.1007/s00709-016-1070-zopenalex-snapshot
Regulation of microtubule nucleation mediated by γ-tubulin complexes
inferredcites →https://doi.org/10.1007/s00709-017-1147-3openalex-snapshot
Kingdom Chromista and its eight phyla: a new synthesis emphasising periplastid protein targeting, cytoskeletal and periplastid evolution, and ancient divergences
inferredcites →https://doi.org/10.1007/s00709-018-1241-1openalex-snapshot
Multigene phylogeny and cell evolution of chromist infrakingdom Rhizaria: contrasting cell organisation of sister phyla Cercozoa and Retaria
inferredcites →https://doi.org/10.1007/s00792-003-0320-0openalex-snapshot
A novel lineage of sulfate-reducing microorganisms: Thermodesulfobiaceae fam. nov., Thermodesulfobium narugense , gen. nov., sp. nov., a new thermophilic isolate from a hot spring
inferredcites →https://doi.org/10.1007/s00792-008-0148-8openalex-snapshot
Dethiobacter alkaliphilus gen. nov. sp. nov., and Desulfurivibrio alkaliphilus gen. nov. sp. nov.: two novel representatives of reductive sulfur cycle from soda lakes
inferredcites →https://doi.org/10.1007/s10482-006-9061-2openalex-snapshot
Signature proteins that are distinctive characteristics of Actinobacteria and their subgroups
inferredcites →https://doi.org/10.1007/s10482-012-9790-3openalex-snapshot
Phylogenetic framework and molecular signatures for the class Chloroflexi and its different clades; proposal for division of the class Chloroflexi class. nov. into the suborder Chloroflexineae subord. nov., consisting of the emended family Oscillochloridaceae and the family Chloroflexaceae fam.…
inferredcites →https://doi.org/10.1007/s10482-013-0062-7openalex-snapshot
Molecular signatures for the phylum (class) Thermotogae and a proposal for its division into three orders (Thermotogales, Kosmotogales ord. nov. and Petrotogales ord. nov.) containing four families (Thermotogaceae, Fervidobacteriaceae fam. nov., Kosmotogaceae fam. nov. and Petrotogaceae fam. nov.)…
inferredcites →https://doi.org/10.1007/s10482-013-0087-yopenalex-snapshot
Re-interpretation of the evidence for the PVC cell plan supports a Gram-negative origin
inferredcites →https://doi.org/10.1007/s10482-013-9957-6openalex-snapshot
Molecular signatures for the phylum Aquificae and its different clades: proposal for division of the phylum Aquificae into the emended order Aquificales, containing the families Aquificaceae and Hydrogenothermaceae, and a new order Desulfurobacteriales ord. nov., containing the family…
inferredcites →https://doi.org/10.1007/s10482-013-9993-2openalex-snapshot
Serine/threonine kinases and E2-ubiquitin conjugating enzymes in Planctomycetes: unexpected findings
inferredcites →https://doi.org/10.1007/s10482-015-0571-7openalex-snapshot
Erratum to: Molecular signatures for the phylum (class) Thermotogae and a proposal for its division into three orders (Thermotogales, Kosmotogales ord. nov. and Petrotogales ord. nov.) containing four families (Thermotogaceae, Fervidobacteriaceae fam. nov., Kosmotogaceae fam. nov. and…
inferredcites →https://doi.org/10.1007/s11120-005-5103-2openalex-snapshot
Purification and Characterization of the B808–866 Light-harvesting Complex from Green Filamentous Bacterium Chloroflexus aurantiacus
inferredcites →https://doi.org/10.1007/s11120-010-9533-0openalex-snapshot
The chlorosome: a prototype for efficient light harvesting in photosynthesis
inferredcites →https://doi.org/10.1007/s11120-013-9869-3openalex-snapshot
Chlorosome antenna complexes from green photosynthetic bacteria
inferredcites →https://doi.org/10.1007/s11120-014-0065-xopenalex-snapshot
A fresh look at the evolution and diversification of photochemical reaction centers
inferredcites →https://doi.org/10.1007/s11120-015-0177-yopenalex-snapshot
Evidence for the presence of key chlorophyll-biosynthesis-related proteins in the genus Rubrobacter (Phylum Actinobacteria) and its implications for the evolution and origin of photosynthesis
inferredcites →https://doi.org/10.1016/0303-2647(78)90033-3openalex-snapshot
The evolutionary origin and phylogeny of microtubules, mitotic spindles and eukaryote flagella
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Fatty acid and lipopolysaccharide analyses of three Heliobacterium spp
inferredcites →https://doi.org/10.1016/j.bbabio.2013.07.006openalex-snapshot
Evolution of cytochrome bc complexes: From membrane-anchored dehydrogenases of ancient bacteria to triggers of apoptosis in vertebrates
inferredcites →https://doi.org/10.1016/j.bbabio.2014.06.002openalex-snapshot
The ultrastructure of Chlorobaculum tepidum revealed by cryo-electron tomography
inferredcites →https://doi.org/10.1016/j.bbalip.2016.12.006openalex-snapshot
Archaeal phospholipids: Structural properties and biosynthesis
inferredcites →https://doi.org/10.1016/j.bbamem.2017.12.020openalex-snapshot
Characterization of the first planctomycetal outer membrane protein identifies a channel in the outer membrane of the anammox bacterium Kuenenia stuttgartiensis
inferredcites →https://doi.org/10.1016/j.bbrc.2017.01.037openalex-snapshot
Identification of UBact, a ubiquitin-like protein, along with other homologous components of a conjugation system and the proteasome in different gram-negative bacteria
inferredcites →https://doi.org/10.1016/j.bbrep.2016.05.010openalex-snapshot
A protein-protein interaction in magnetosomes: TPR protein MamA interacts with an Mms6 protein
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Predation and eukaryote cell origins: A coevolutionary perspective
inferredcites →https://doi.org/10.1016/j.bpj.2017.04.007openalex-snapshot
Ancestral Interactions of Ribosomal RNA and Ribosomal Proteins
inferredcites →https://doi.org/10.1016/j.cell.2010.05.033openalex-snapshot
Pushing and Pulling in Prokaryotic DNA Segregation
inferredcites →https://doi.org/10.1016/j.cell.2011.07.029openalex-snapshot
Peptidoglycan Remodeling and Conversion of an Inner Membrane into an Outer Membrane during Sporulation
inferredcites →https://doi.org/10.1016/j.cell.2018.02.016openalex-snapshot
Major New Microbial Groups Expand Diversity and Alter our Understanding of the Tree of Life
inferredcites →https://doi.org/10.1016/j.copbio.2006.05.005openalex-snapshot
The Planctomycetes, Verrucomicrobia, Chlamydiae and sister phyla comprise a superphylum with biotechnological and medical relevance
inferredcites →https://doi.org/10.1016/j.cub.2014.01.036openalex-snapshot
An Alternative Root for the Eukaryote Tree of Life
inferredcites →https://doi.org/10.1016/j.cub.2015.04.006openalex-snapshot
Ancient Homology of the Mitochondrial Contact Site and Cristae Organizing System Points to an Endosymbiotic Origin of Mitochondrial Cristae
inferredcites →https://doi.org/10.1016/j.cub.2015.06.063openalex-snapshot
Zeta-Tubulin Is a Member of a Conserved Tubulin Module and Is a Component of the Centriolar Basal Foot in Multiciliated Cells
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A Eukaryote without a Mitochondrial Organelle
inferredcites →https://doi.org/10.1016/j.ejop.2012.06.001openalex-snapshot
Early evolution of eukaryote feeding modes, cell structural diversity, and classification of the protozoan phyla Loukozoa, Sulcozoa, and Choanozoa
inferredcites →https://doi.org/10.1016/j.ejop.2014.12.001openalex-snapshot
Mixed heterolobosean and novel gregarine lineage genes from culture ATCC 50646: Long-branch artefacts, not lateral gene transfer, distort α-tubulin phylogeny
inferredcites →https://doi.org/10.1016/j.ejop.2017.07.005openalex-snapshot
Microsporidian genus Berwaldia (Opisthosporidia, Microsporidia), infecting daphnids (Crustacea, Branchiopoda): Biology, structure, molecular phylogeny and description of two new species
inferredcites →https://doi.org/10.1016/j.ejop.2017.09.002openalex-snapshot
Euglenoid pellicle morphogenesis and evolution in light of comparative ultrastructure and trypanosomatid biology: Semi-conservative microtubule/strip duplication, strip shaping and transformation
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Hypothesis on chlorosome biogenesis in green photosynthetic bacteria
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Evolution of photosynthesis and aerobic respiration in the cyanobacteria
inferredcites →https://doi.org/10.1016/j.gene.2011.02.006openalex-snapshot
Unique sequences and predicted functions of myosins in Tetrahymena thermophila
inferredcites →https://doi.org/10.1016/j.jmb.2004.03.076openalex-snapshot
The Roles of Ribosomal Proteins in the Structure Assembly, and Evolution of the Large Ribosomal Subunit
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Crystal Structure of an Archaeal Actin Homolog
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Prokaryotic Ubiquitin-Like Protein and Its Ligase/Deligase Enyzmes
inferredcites →https://doi.org/10.1016/j.jsb.2003.10.010openalex-snapshot
Evolutionary history and higher order classification of AAA+ ATPases
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Phylogeny and evolution of the Archaea: one hundred genomes later
inferredcites →https://doi.org/10.1016/j.mib.2015.01.005openalex-snapshot
Ser/Thr phosphorylation as a regulatory mechanism in bacteria
inferredcites →https://doi.org/10.1016/j.mib.2015.09.005openalex-snapshot
Motility in the epsilon-proteobacteria
inferredcites →https://doi.org/10.1016/j.precamres.2008.10.005openalex-snapshot
New morphological observations for Paleoproterozoic acritarchs from the Chuanlinggou Formation, North China
inferredcites →https://doi.org/10.1016/j.resmic.2010.10.004openalex-snapshot
On the last common ancestor and early evolution of eukaryotes: reconstructing the history of mitochondrial ribosomes
inferredcites →https://doi.org/10.1016/j.resmic.2010.10.005openalex-snapshot
A new fusion hypothesis for the origin of Eukarya: better than previous ones, but probably also wrong
inferredcites →https://doi.org/10.1016/j.resmic.2013.02.006openalex-snapshot
Metagenomics of Kamchatkan hot spring filaments reveal two new major (hyper)thermophilic lineages related to Thaumarchaeota
inferredcites →https://doi.org/10.1016/j.sbi.2017.12.009openalex-snapshot
High-resolution structures of mitochondrial ribosomes and their functional implications
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FlaF Is a β-Sandwich Protein that Anchors the Archaellum in the Archaeal Cell Envelope by Binding the S-Layer Protein
inferredcites →https://doi.org/10.1016/j.syapm.2012.06.004openalex-snapshot
Structure–functional analysis of the Dictyoglomus cell envelope
inferredcites →https://doi.org/10.1016/j.syapm.2015.08.001openalex-snapshot
Novel isolates double the number of chemotrophic species and allow the first description of higher taxa in Acidobacteria subdivision 4
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Revised phylogeny of Bacteroidetes and proposal of sixteen new taxa and two new combinations including Rhodothermaeota phyl. nov.
inferredcites →https://doi.org/10.1016/j.syapm.2018.01.009openalex-snapshot
Abditibacterium utsteinense sp. nov., the first cultivated member of candidate phylum FBP, isolated from ice-free Antarctic soil samples
inferredcites →https://doi.org/10.1016/j.syapm.2018.12.003openalex-snapshot
Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species Cryosericum septentrionale gen. nov. sp.…
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DnaA and ORC: more than DNA replication initiators
inferredcites →https://doi.org/10.1016/j.tim.2010.06.005openalex-snapshot
A phylum level perspective on bacterial cell envelope architecture
inferredcites →https://doi.org/10.1016/j.tim.2011.09.002openalex-snapshot
The archaeal ‘TACK’ superphylum and the origin of eukaryotes
inferredcites →https://doi.org/10.1016/j.tim.2012.09.006openalex-snapshot
Ubiquitin-like proteins and their roles in archaea
inferredcites →https://doi.org/10.1016/j.tim.2013.10.008openalex-snapshot
PVC bacteria: variation of, but not exception to, the Gram-negative cell plan
inferredcites →https://doi.org/10.1016/j.tim.2016.03.005openalex-snapshot
Bacterial Vesicle Secretion and the Evolutionary Origin of the Eukaryotic Endomembrane System
inferredcites →https://doi.org/10.1016/j.tim.2016.07.001openalex-snapshot
Driving Apart and Segregating Genomes in Archaea
inferredcites →https://doi.org/10.1016/j.tplants.2006.01.007openalex-snapshot
CP43-like chlorophyll binding proteins: structural and evolutionary implications
inferredcites →https://doi.org/10.1016/j.ygeno.2011.08.001openalex-snapshot
Whole-genome comparison clarifies close phylogenetic relationships between the phyla Dictyoglomi and Thermotogae
inferredcites →https://doi.org/10.1016/j.ympev.2013.05.006openalex-snapshot
The effects of model choice and mitigating bias on the ribosomal tree of life
inferredcites →https://doi.org/10.1016/j.ympev.2014.08.011openalex-snapshot
Multigene phylogeny resolves deep branching of Amoebozoa
inferredcites →https://doi.org/10.1016/j.ympev.2014.08.012openalex-snapshot
Multigene eukaryote phylogeny reveals the likely protozoan ancestors of opisthokonts (animals, fungi, choanozoans) and Amoebozoa
inferredcites →https://doi.org/10.1016/j.ympev.2015.07.004openalex-snapshot
Multiple origins of Heliozoa from flagellate ancestors: New cryptist subphylum Corbihelia, superclass Corbistoma, and monophyly of Haptista, Cryptista, Hacrobia and Chromista
inferredcites →https://doi.org/10.1016/j.ympev.2016.01.011openalex-snapshot
First multigene analysis of Archamoebae (Amoebozoa: Conosa) robustly reveals its phylogeny and shows that Entamoebidae represents a deep lineage of the group
inferredcites →https://doi.org/10.1016/j.ympev.2016.03.023openalex-snapshot
187-gene phylogeny of protozoan phylum Amoebozoa reveals a new class (Cutosea) of deep-branching, ultrastructurally unique, enveloped marine Lobosa and clarifies amoeba evolution
inferredcites →https://doi.org/10.1016/j.ympev.2018.04.011openalex-snapshot
Extreme halophilic archaea derive from two distinct methanogen Class II lineages
inferredcites →https://doi.org/10.1016/s0022-5193(87)80112-1openalex-snapshot
Bacterial DNA segregation: Its motors and positional control
inferredcites →https://doi.org/10.1016/s0092-8674(00)81262-3openalex-snapshot
A Hot Topic: The Origin of Hyperthermophiles
inferredcites →https://doi.org/10.1016/s0168-9525(00)01980-6openalex-snapshot
Reverse gyrase from hyperthermophiles: probable transfer of a thermoadaptation trait from Archaea to Bacteria
inferredcites →https://doi.org/10.1016/s0378-1097(01)00180-xopenalex-snapshot
Molecular evidence that the capacity for endosporulation is universal among phototrophic heliobacteria
inferredcites →https://doi.org/10.1016/s0378-1119(01)00733-8openalex-snapshot
Prokaryotic structural maintenance of chromosomes (SMC) proteins: distribution, phylogeny, and comparison with MukBs and additional prokaryotic and eukaryotic coiled-coil proteins
inferredcites →https://doi.org/10.1016/s0960-9822(03)00008-3openalex-snapshot
Evolution of Eukaryotic Cell Cycle Regulation
inferredcites →https://doi.org/10.1016/s1360-1385(00)01598-3openalex-snapshot
Membrane heredity and early chloroplast evolution
inferredcites →https://doi.org/10.1016/s1383-5769(98)80093-7openalex-snapshot
The molecular phylogeny of eukaryota: solid facts and uncertainties
inferredcites →https://doi.org/10.1017/cbo9780511601064openalex-snapshot
The Proterozoic Biosphere
inferredcites →https://doi.org/10.1017/s0006323198005167openalex-snapshot
A revised six-kingdom system of life
inferredcites →https://doi.org/10.1017/s0031182016001633openalex-snapshot
Hyperspora aquatica n.gn., n.sp. (Microsporidia), hyperparasitic in Marteilia cochillia (Paramyxida), is closely related to crustacean-infecting microspordian taxa
inferredcites →https://doi.org/10.1021/acs.biochem.6b00479openalex-snapshot
FtsZ Protofilament Curvature Is the Opposite of Tubulin Rings
inferredcites →https://doi.org/10.1023/a:1011807229154openalex-snapshot
‘Evolution of Photosynthesis’ (1970), re-examined thirty years later
inferredcites →https://doi.org/10.1023/b:pres.0000030428.36950.43openalex-snapshot
The FMO Protein
inferredcites →https://doi.org/10.1023/b:pres.0000030457.06495.83openalex-snapshot
Thinking About the Evolution of Photosynthesis
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Greenhouse warming by CH 4 in the atmosphere of early Earth
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The origin of nuclei and of eukaryotic cells
inferredcites →https://doi.org/10.1038/287248a0openalex-snapshot
The Archaebacteria and eukaryotic origins
inferredcites →https://doi.org/10.1038/32096openalex-snapshot
The hydrogen hypothesis for the first eukaryote
inferredcites →https://doi.org/10.1038/324416a0openalex-snapshot
The kingdoms of organisms
inferredcites →https://doi.org/10.1038/326411a0openalex-snapshot
Ribosomal RNA sequence suggests microsporidia are extremely ancient eukaryotes
inferredcites →https://doi.org/10.1038/339100a0openalex-snapshot
Archaebacteria and Archezoa
inferredcites →https://doi.org/10.1038/35086563openalex-snapshot
Mealybug β-proteobacterial endosymbionts contain γ-proteobacterial symbionts
inferredcites →https://doi.org/10.1038/417244aopenalex-snapshot
A non-hyperthermophilic ancestor for Bacteria
inferredcites →https://doi.org/10.1038/423013aopenalex-snapshot
Back from the dead
inferredcites →https://doi.org/10.1038/446257copenalex-snapshot
Concept of a bacterium still valid in prokaryote debate
inferredcites →https://doi.org/10.1038/466041aopenalex-snapshot
Origins of multicellularity
inferredcites →https://doi.org/10.1038/ismej.2011.78openalex-snapshot
De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities
inferredcites →https://doi.org/10.1038/ismej.2012.132openalex-snapshot
Geoarchaeota: a new candidate phylum in the Archaea from high-temperature acidic iron mats in Yellowstone National Park
inferredcites →https://doi.org/10.1038/ismej.2014.94openalex-snapshot
Genomic insights into the uncultured genus ‘Candidatus Magnetobacterium’ in the phylum Nitrospirae
inferredcites →https://doi.org/10.1038/ismej.2015.158openalex-snapshot
Refining the phylum Chlorobi by resolving the phylogeny and metabolic potential of the representative of a deeply branching, uncultivated lineage
inferredcites →https://doi.org/10.1038/ismej.2016.55openalex-snapshot
Phylogenomic analysis of Candidatus ‘Izimaplasma’ species: free-living representatives from a Tenericutes clade found in methane seeps
inferredcites →https://doi.org/10.1038/ismej.2016.84openalex-snapshot
Characterization of the first cultured representative of Verrucomicrobia subdivision 5 indicates the proposal of a novel phylum
inferredcites →https://doi.org/10.1038/ismej.2017.122openalex-snapshot
The growing tree of Archaea: new perspectives on their diversity, evolution and ecology
inferredcites →https://doi.org/10.1038/nature02888openalex-snapshot
Photosynthetic microbial mats in the 3,416-Myr-old ocean
inferredcites →https://doi.org/10.1038/nature03949openalex-snapshot
Myosin domain evolution and the primary divergence of eukaryotes
inferredcites →https://doi.org/10.1038/nature04531openalex-snapshot
Introns and the origin of nucleus–cytosol compartmentalization
inferredcites →https://doi.org/10.1038/nature04584openalex-snapshot
Evidence from fluid inclusions for microbial methanogenesis in the early Archaean era
inferredcites →https://doi.org/10.1038/nature05499openalex-snapshot
Biosignatures and abiotic constraints on early life
inferredcites →https://doi.org/10.1038/nature06202openalex-snapshot
Isotopic evidence for Mesoarchaean anoxia and changing atmospheric sulphur chemistry
inferredcites →https://doi.org/10.1038/nature07393openalex-snapshot
Parallel adaptations to high temperatures in the Archaean eon
inferredcites →https://doi.org/10.1038/nature08883openalex-snapshot
Nitrite-driven anaerobic methane oxidation by oxygenic bacteria
inferredcites →https://doi.org/10.1038/nature09166openalex-snapshot
Large colonial organisms with coordinated growth in oxygenated environments 2.1 Gyr ago
inferredcites →https://doi.org/10.1038/nature09486openalex-snapshot
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inferredcites →https://doi.org/10.1038/nature12352openalex-snapshot
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inferredcites →https://doi.org/10.1038/nature12779openalex-snapshot
An archaeal origin of eukaryotes supports only two primary domains of life
inferredcites →https://doi.org/10.1038/nature13983openalex-snapshot
CetZ tubulin-like proteins control archaeal cell shape
inferredcites →https://doi.org/10.1038/nature14180openalex-snapshot
Isotopic evidence for biological nitrogen fixation by molybdenum-nitrogenase from 3.2 Gyr
inferredcites →https://doi.org/10.1038/nature14963openalex-snapshot
Endosymbiotic origin and differential loss of eukaryotic genes
inferredcites →https://doi.org/10.1038/nature21031openalex-snapshot
Asgard archaea illuminate the origin of eukaryotic cellular complexity
inferredcites →https://doi.org/10.1038/nature23457openalex-snapshot
The rise of algae in Cryogenian oceans and the emergence of animals
inferredcites →https://doi.org/10.1038/nature25014openalex-snapshot
Atmospheric trace gases support primary production in Antarctic desert surface soil
inferredcites →https://doi.org/10.1038/nbt.4229openalex-snapshot
A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life
inferredcites →https://doi.org/10.1038/ncomms2348openalex-snapshot
The bipolar assembly domain of the mitotic motor kinesin-5
inferredcites →https://doi.org/10.1038/ncomms3304openalex-snapshot
PhyloPhlAn is a new method for improved phylogenetic and taxonomic placement of microbes
inferredcites →https://doi.org/10.1038/ncomms4270openalex-snapshot
The nucleoporin MEL-28 promotes RanGTP-dependent γ-tubulin recruitment and microtubule nucleation in mitotic spindle formation
inferredcites →https://doi.org/10.1038/ngeo1238openalex-snapshot
Microfossils of sulphur-metabolizing cells in 3.4-billion-year-old rocks of Western Australia
inferredcites →https://doi.org/10.1038/nmicrobiol.2016.116openalex-snapshot
The physiology and habitat of the last universal common ancestor
inferredcites →https://doi.org/10.1038/nmicrobiol.2016.170openalex-snapshot
Methylotrophic methanogenesis discovered in the archaeal phylum Verstraetearchaeota
inferredcites →https://doi.org/10.1038/nmicrobiol.2016.48openalex-snapshot
A new view of the tree of life
inferredcites →https://doi.org/10.1038/nrg2071openalex-snapshot
The origin of eukaryotes: a reappraisal
inferredcites →https://doi.org/10.1038/nrm2334openalex-snapshot
Inositol derivatives: evolution and functions
inferredcites →https://doi.org/10.1038/nrmicro.2017.153openalex-snapshot
Prokaryotic cytoskeletons: protein filaments organizing small cells
inferredcites →https://doi.org/10.1038/nrmicro2406openalex-snapshot
Evolution of diverse cell division and vesicle formation systems in Archaea
inferredcites →https://doi.org/10.1038/nrmicro2696openalex-snapshot
Proteasomes and protein conjugation across domains of life
inferredcites →https://doi.org/10.1038/nrmicro3330openalex-snapshot
Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences
inferredcites →https://doi.org/10.1038/nrmicro3525openalex-snapshot
Outer-membrane vesicles from Gram-negative bacteria: biogenesis and functions
inferredcites →https://doi.org/10.1038/nsmb.3132openalex-snapshot
Architecture of the Rix1–Rea1 checkpoint machinery during pre-60S-ribosome remodeling
inferredcites →https://doi.org/10.1038/nsmb.3154openalex-snapshot
Motoring toward pre-60S-ribosome export
inferredcites →https://doi.org/10.1038/s41396-018-0056-6openalex-snapshot
Strains of the toxic and bloom-forming Nodularia spumigena (cyanobacteria) can degrade methylphosphonate and release methane
inferredcites →https://doi.org/10.1038/s41396-020-00772-2openalex-snapshot
Bridging the membrane lipid divide: bacteria of the FCB group superphylum have the potential to synthesize archaeal ether lipids
inferredcites →https://doi.org/10.1038/s41467-017-02015-zopenalex-snapshot
Bactofilin-mediated organization of the ParABS chromosome segregation system in Myxococcus xanthus
inferredcites →https://doi.org/10.1038/s41467-018-05198-1openalex-snapshot
Rpn11-mediated ubiquitin processing in an ancestral archaeal ubiquitination system
inferredcites →https://doi.org/10.1038/s41467-018-05284-4openalex-snapshot
Genomic inference of the metabolism and evolution of the archaeal phylum Aigarchaeota
inferredcites →https://doi.org/10.1038/s41467-018-08246-yopenalex-snapshot
Hydrogen-based metabolism as an ancestral trait in lineages sibling to the Cyanobacteria
inferredcites →https://doi.org/10.1038/s41467-019-13499-2openalex-snapshot
Phagocytosis-like cell engulfment by a planctomycete bacterium
inferredcites →https://doi.org/10.1038/s41559-018-0513-7openalex-snapshot
Horizontal gene transfer constrains the timing of methanogen evolution
inferredcites →https://doi.org/10.1038/s41559-018-0644-xopenalex-snapshot
Integrated genomic and fossil evidence illuminates life’s early evolution and eukaryote origin
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What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.3687032openalex-extracted
Sulfur Reduction Coupled with Anaerobic Ammonium Oxidation Drove Prebiotic Proto-Anabolic Networks
inferred← citeshttps://doi.org/10.5281/zenodo.7499901zenodo-depositor-declared
Das stille Aussterben von Arten und Taxonomen – ein Appell an Wissenschaftspolitik und Legislative
inferred← citeshttps://doi.org/10.1002/9781118960608.cbm00084openalex-snapshot
Calditrichia class. nov.
inferred← citeshttps://doi.org/10.1002/9781119555568.ch9openalex-snapshot
When We Were Triangles
inferred← citeshttps://doi.org/10.1002/9781119901228.ch5openalex-snapshot
When We Were Triangles
inferred← citeshttps://doi.org/10.1002/brv.70201openalex-snapshot
On the timing of eukaryotic origin
inferred← citeshttps://doi.org/10.1007/978-1-0716-2445-6_1openalex-snapshot
Archaea: A Goldmine for Molecular Biologists and Evolutionists
inferred← citeshttps://doi.org/10.1007/978-3-032-03300-0_4openalex-snapshot
Evolution of Bacterial tRNA Nucleotidyltransferases
inferred← citeshttps://doi.org/10.1007/978-3-642-27833-4_538-4openalex-snapshot
Eukaryotes, Appearance and Early Evolution of
inferred← citeshttps://doi.org/10.1007/978-3-662-65093-6_538openalex-snapshot
Eukaryotes, Appearance and Early Evolution of
inferred← citeshttps://doi.org/10.1007/s00709-021-01665-7openalex-snapshot
Ciliary transition zone evolution and the root of the eukaryote tree: implications for opisthokont origin and classification of kingdoms Protozoa, Plantae, and Fungi
inferred← citeshttps://doi.org/10.1016/b978-0-12-822563-9.00123-2openalex-snapshot
Cenancestor
inferred← citeshttps://doi.org/10.1016/b978-0-443-15750-9.00121-xopenalex-snapshot
History of Symbiogenesis
inferred← citeshttps://doi.org/10.1016/j.bbabio.2020.148304openalex-snapshot
On the evolution of cytochrome oxidases consuming oxygen
inferred← citeshttps://doi.org/10.1016/j.cub.2020.12.035openalex-snapshot
Evolution: Reconstructing the Timeline of Eukaryogenesis
inferred← citeshttps://doi.org/10.1016/j.gca.2022.03.004openalex-snapshot
A thermodynamic chemical reaction network drove autocatalytic prebiotic peptides formation
inferred← citeshttps://doi.org/10.1016/j.jbc.2023.105005openalex-snapshot
Neofunctionalization of S-adenosylmethionine decarboxylase into pyruvoyl-dependent L-ornithine and L-arginine decarboxylases is widespread in bacteria and archaea
inferred← citeshttps://doi.org/10.1016/j.jsb.2023.107987openalex-snapshot
Prokaryotic membrane coat - like proteins: An update
inferred← citeshttps://doi.org/10.1016/j.molstruc.2022.132648openalex-snapshot
Synthesis, biological evaluation of novel thiopyrano[2,3-d]thiazoles incorporating arylsulfonate moiety as potential inhibitors of tubulin polymerization, and molecular modeling studies
inferred← citeshttps://doi.org/10.1038/s41396-021-00958-2openalex-snapshot
The soil microbial food web revisited: Predatory myxobacteria as keystone taxa?
inferred← citeshttps://doi.org/10.1038/s41559-020-01299-7openalex-snapshot
Genome-wide analysis of the Firmicutes illuminates the diderm/monoderm transition
inferred← citeshttps://doi.org/10.1038/s41559-022-01833-9openalex-snapshot
The role of mitochondrial energetics in the origin and diversification of eukaryotes
inferred← citeshttps://doi.org/10.1038/s41559-022-01839-3openalex-snapshot
Closing the energetics gap
inferred← citeshttps://doi.org/10.1038/s41586-025-08709-5openalex-snapshot
A robustly rooted tree of eukaryotes reveals their excavate ancestry
inferred← citeshttps://doi.org/10.1038/s41598-021-90440-yopenalex-snapshot
Phylogenetic analysis of mutational robustness based on codon usage supports that the standard genetic code does not prefer extreme environments
inferred← citeshttps://doi.org/10.1038/s41598-023-27421-wopenalex-snapshot
Eco-evolutionary modelling of microbial syntrophy indicates the robustness of cross-feeding over cross-facilitation
inferred← citeshttps://doi.org/10.1073/pnas.2405524121openalex-snapshot
Multisubstrate specificity shaped the complex evolution of the aminotransferase family across the tree of life
inferred← citeshttps://doi.org/10.1093/gbe/evab055openalex-snapshot
Gene Duplications Trace Mitochondria to the Onset of Eukaryote Complexity
inferred← citeshttps://doi.org/10.1093/ismeco/ycae139openalex-snapshot
Meta-omics reveals role of photosynthesis in microbially induced carbonate precipitation at a CO2-rich geyser
inferred← citeshttps://doi.org/10.1093/ismejo/wrae129openalex-snapshot
Phylogenetic reconciliation: making the most of genomes to understand microbial ecology and evolution
inferred← citeshttps://doi.org/10.1093/jambio/lxae231openalex-snapshot
Taxonomic and functional characterization of biofilms from a photovoltaic panel reveals high genetic and metabolic complexity of the communities
inferred← citeshttps://doi.org/10.1093/molbev/msab186openalex-snapshot
Reconciling Asgardarchaeota Phylogenetic Proximity to Eukaryotes and Planctomycetes Cellular Features in the Evolution of Life
inferred← citeshttps://doi.org/10.1093/molbev/msac054openalex-snapshot
Looking through the Lens of the Ribosome Biogenesis Evolutionary History: Possible Implications for Archaeal Phylogeny and Eukaryogenesis
inferred← citeshttps://doi.org/10.1093/molbev/msaf314openalex-snapshot
Ancestral Chaperonins Provide the First Structural Glimpse into Early Multimeric Protein Evolution
inferred← citeshttps://doi.org/10.1093/oso/9780192847287.003.0003openalex-snapshot
The Major Lines of Descent
inferred← citeshttps://doi.org/10.1093/pnasnexus/pgaf035openalex-snapshot
Oxidative adaptations in prokaryotes imply the oxygenic photosynthesis before crown-group Cyanobacteria
inferred← citeshttps://doi.org/10.1098/rstb.2024.0092openalex-snapshot
A diverse Palaeoproterozoic microbial ecosystem implies early eukaryogenesis
inferred← citeshttps://doi.org/10.1099/ijsem.0.004596openalex-snapshot
Notification of changes in taxonomic opinion previously published outside the IJSEM
inferred← citeshttps://doi.org/10.1099/ijsem.0.005214openalex-snapshot
Rhodothermus bifroesti sp. nov., a thermophilic bacterium isolated from the basaltic subsurface of the volcanic island Surtsey
inferred← citeshttps://doi.org/10.1099/ijsem.0.005638openalex-snapshot
Filling the gaps: missing taxon names at the ranks of class, order and family
inferred← citeshttps://doi.org/10.1099/ijsem.0.005650openalex-snapshot
Proposal to include the categories kingdom and domain in the International Code of Nomenclature of Prokaryotes
inferred← citeshttps://doi.org/10.1099/ijsem.0.006064openalex-snapshot
Judicial Opinion 129
inferred← citeshttps://doi.org/10.1099/ijsem.0.006085openalex-snapshot
Methylacidiphilum caldifontis gen. nov., sp. nov., a thermoacidophilic methane-oxidizing bacterium from an acidic geothermal environment, and descriptions of the family Methylacidiphilaceae fam. nov. and order Methylacidiphilales ord. nov.
inferred← citeshttps://doi.org/10.1099/ijsem.0.006242openalex-snapshot
Valid publication of names of two domains and seven kingdoms of prokaryotes
inferred← citeshttps://doi.org/10.1111/1462-2920.15890openalex-snapshot
Diverse heliorhodopsins detected via functional metagenomics in freshwater Actinobacteria , Chloroflexi and Archaea
inferred← citeshttps://doi.org/10.1111/jeu.13013openalex-snapshot
In memoriam: Thomas Cavalier‐Smith (1942–2021)
inferred← citeshttps://doi.org/10.1128/aem.02247-23openalex-snapshot
Teaching old dogs new tricks: genetic engineering methanogens
inferred← citeshttps://doi.org/10.1128/mra.01206-21openalex-snapshot
Genome Sequence of Litorilinea aerophila, an Icelandic Intertidal Hot Springs Bacterium
inferred← citeshttps://doi.org/10.1371/journal.pcbi.1014699openalex-snapshot
Host-initiated microbial association leads to stable ectosymbiosis in an ecological model
inferred← citeshttps://doi.org/10.1601/nm.14871openalex-snapshot
Nomenclature Abstract for Caldisericia Mori et al. 2009 emend. Cavalier-Smith and Chao 2020.
inferred← citeshttps://doi.org/10.17816/phf101311openalex-snapshot
Supergroups of eukaryotes through a biotechnologist’s look. The system of eukaryotes and the need for a taxonomic/biotechnological interface
inferred← citeshttps://doi.org/10.17816/phf321799openalex-snapshot
To the 80th anniversary of Professor Thomas Cavalier-Smith (1942–2021)
inferred← citeshttps://doi.org/10.17816/phf633981openalex-snapshot
The last system by Cavalier-Smith
inferred← citeshttps://doi.org/10.3389/fgene.2021.693071openalex-snapshot
The Evolution of the Hallmarks of Aging
inferred← citeshttps://doi.org/10.3389/fmicb.2020.01373openalex-snapshot
Cryo-Electron Tomography Reveals the Complex Ultrastructural Organization of Multicellular Filamentous Chloroflexota (Chloroflexi) Bacteria
inferred← citeshttps://doi.org/10.3389/fmicb.2021.664216openalex-snapshot
Respiratory Heme A-Containing Oxidases Originated in the Ancestors of Iron-Oxidizing Bacteria
inferred← citeshttps://doi.org/10.3389/fmicb.2022.1100249openalex-snapshot
Early origin and evolution of the FtsZ/tubulin protein family
inferred← citeshttps://doi.org/10.3390/cells10071591openalex-snapshot
Evolutionary Origins of DNA Repair Pathways: Role of Oxygen Catastrophe in the Emergence of DNA Glycosylases
inferred← citeshttps://doi.org/10.3390/d15101053openalex-snapshot
The Silent Extinction of Species and Taxonomists—An Appeal to Science Policymakers and Legislators
inferred← citeshttps://doi.org/10.3390/genes13020376openalex-snapshot
Was the Last Bacterial Common Ancestor a Monoderm after All?
inferred← citeshttps://doi.org/10.3390/microorganisms10020455openalex-snapshot
New Alphaproteobacteria Thrive in the Depths of the Ocean with Oxygen Gradient
inferred← citeshttps://doi.org/10.37800/rm.1.2024.44-51openalex-snapshot
Влияние материнского микробиома на развитие преэклампсии: обзор литературы
inferred← citeshttps://doi.org/10.70675/7946a826z764fz418cz89d6z0e631560e178openalex-snapshot
Phylogenomic approaches to uncover the diversity and evolution of the bacterial cell envelope
inferred← citeshttps://doi.org/10.70675/b502070cz5e9bz4648z81f5z86596a237650openalex-snapshot
Deciphering the bacterial energy oxidation of sulphur and arsenic and their possible connections : the case of Halorhodospira halophila and Aquifex aeolicus
inferred← citeshttps://doi.org/10.7287/peerj.11348v0.1/reviews/1openalex-snapshot
Peer Review #1 of "ToRQuEMaDA: tool for retrieving queried Eubacteria, metadata and dereplicating assemblies (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.11348v0.1/reviews/2openalex-snapshot
Peer Review #2 of "ToRQuEMaDA: tool for retrieving queried Eubacteria, metadata and dereplicating assemblies (v0.1)"
inferred← citeshttps://doi.org/10.7287/peerj.11348v0.2/reviews/1openalex-snapshot
Peer Review #1 of "ToRQuEMaDA: tool for retrieving queried Eubacteria, metadata and dereplicating assemblies (v0.2)"
inferred← citeshttps://doi.org/10.7287/peerj.11348v0.2/reviews/2openalex-snapshot
Peer Review #2 of "ToRQuEMaDA: tool for retrieving queried Eubacteria, metadata and dereplicating assemblies (v0.2)"
inferred← citeshttps://doi.org/10.7554/elife.67448openalex-snapshot
Agl24 is an ancient archaeal homolog of the eukaryotic N-glycan chitobiose synthesis enzymes
inferred← citeshttps://doi.org/10.7717/peerj.11348openalex-snapshot
ToRQuEMaDA: tool for retrieving queried Eubacteria, metadata and dereplicating assemblies
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.