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Long L1 insertions in human gene introns specifically reduce the content of corresponding primary transcripts

https://doi.org/10.1007/s10709-005-5967-2
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1006/geno.2002.6758openalex-snapshot
Many Human Genes Are Transcribed from the Antisense Promoter of L1 Retrotransposon
inferredcites →https://doi.org/10.1007/s00439-002-0904-2openalex-snapshot
Genome-wide targeted search for human specific and polymorphic L1 integrations
inferredcites →https://doi.org/10.1016/j.tig.2003.11.006openalex-snapshot
L1 (LINE-1) retrotransposon diversity differs dramatically between mammals and fish
inferredcites →https://doi.org/10.1016/s0021-9258(17)42053-9openalex-snapshot
Cloning and identification of testis-specific transcription elongation factor S-II.
inferredcites →https://doi.org/10.1038/35057062openalex-snapshot
Initial sequencing and analysis of the human genome
inferredcites →https://doi.org/10.1038/nature01262openalex-snapshot
Initial sequencing and comparative analysis of the mouse genome
inferredcites →https://doi.org/10.1038/nature02535openalex-snapshot
A highly active synthetic mammalian retrotransposon
inferredcites →https://doi.org/10.1038/nature02536openalex-snapshot
Transcriptional disruption by the L1 retrotransposon and implications for mammalian transcriptomes
inferredcites →https://doi.org/10.1038/ng1269openalex-snapshot
RNA truncation by premature polyadenylation attenuates human mobile element activity
inferredcites →https://doi.org/10.1074/jbc.m005175200openalex-snapshot
Identification, Cloning, Expression, and Biochemical Characterization of the Testis-specific RNA Polymerase II Elongation Factor ELL3
inferredcites →https://doi.org/10.1086/341718openalex-snapshot
A Comprehensive Analysis of Recently Integrated Human Ta L1 Elements
inferredcites →https://doi.org/10.1093/hmg/9.4.653openalex-snapshot
Transduction of 3'-flanking sequences is common in L1 retrotransposition
inferredcites →https://doi.org/10.1093/nar/20.12.3139openalex-snapshot
Identification of an internal cis-element essential for the human Li transcription and a nuclear factor(s) binding to the element
inferredcites →https://doi.org/10.1093/nar/28.2.411openalex-snapshot
Members of the SRY family regulate the human LINE retrotransposons
inferredcites →https://doi.org/10.1093/nar/gkg663openalex-snapshot
An important role for RUNX3 in human L1 transcription and retrotransposition
inferredcites →https://doi.org/10.1101/gr.10.4.411openalex-snapshot
Frequent Human Genomic DNA Transduction Driven by LINE-1 Retrotransposition
inferredcites →https://doi.org/10.1101/gr.1006603openalex-snapshot
Allelic Variation in Gene Expression Is Common in the Human Genome
inferredcites →https://doi.org/10.1101/gr.2326704openalex-snapshot
The Insertional History of an Active Family of L1 Retrotransposons in Humans
inferredcites →https://doi.org/10.1101/gr.2745804openalex-snapshot
The human L1 promoter: Variable transcription initiation sites and a major impact of upstream flanking sequence on promoter activity
inferredcites →https://doi.org/10.1126/science.1072545openalex-snapshot
Allelic Variation in Human Gene Expression
inferredcites →https://doi.org/10.1126/science.1089670openalex-snapshot
Mobile Elements: Drivers of Genome Evolution
inferredcites →https://doi.org/10.1146/annurev.genet.35.102401.091032openalex-snapshot
Biology of Mammalian L1 Retrotransposons
inferredcites →https://doi.org/10.2144/05384st02openalex-snapshot
Cell Line Fingerprinting Using Retroelement Insertion Polymorphism

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4070894openalex-extracted
Non-Allelic Homologous Recombination Leading to Premature Transcription Termination in the ARSB Gene as a Novel Cause of Mucopolysaccharidosis Type VI
inferred← citeshttps://doi.org/10.1007/978-94-007-1939-2_23openalex-snapshot
Recent Inserts of Transposable Elements Affect Structure and Functions of Human Genome
inferred← citeshttps://doi.org/10.1016/b978-0-08-046884-6.00222-0openalex-snapshot
LINE-1
inferred← citeshttps://doi.org/10.1016/b978-0-12-380860-8.00006-9openalex-snapshot
Restless Genomes
inferred← citeshttps://doi.org/10.1016/b978-0-12-801238-3.01922-xopenalex-snapshot
Long Interspersed Nuclear Element (LINE-1/L1)
inferred← citeshttps://doi.org/10.1016/j.cell.2010.05.026openalex-snapshot
Mobile Interspersed Repeats Are Major Structural Variants in the Human Genome
inferred← citeshttps://doi.org/10.1016/j.neures.2023.05.001openalex-snapshot
Identification of epigenetically active L1 promoters in the human brain and their relationship with psychiatric disorders
inferred← citeshttps://doi.org/10.1016/j.placenta.2007.11.009openalex-snapshot
Cellular Localization of Placenta-Specific Human Endogenous Retrovirus (HERV) Transcripts and their Possible Implication in Pregnancy-Induced Hypertension
inferred← citeshttps://doi.org/10.1016/j.semcancer.2010.06.001openalex-snapshot
All y’all need to know ‘bout retroelements in cancer
inferred← citeshttps://doi.org/10.1016/j.ygeno.2009.08.013openalex-snapshot
Isolation of cancer-specific chimeric transcripts induced by hypomethylation of the LINE-1 antisense promoter
inferred← citeshttps://doi.org/10.1038/ng.368openalex-snapshot
The regulated retrotransposon transcriptome of mammalian cells
inferred← citeshttps://doi.org/10.1093/gbe/evr015openalex-snapshot
Effect of the Transposable Element Environment of Human Genes on Gene Length and Expression
inferred← citeshttps://doi.org/10.1093/nar/gkq132openalex-snapshot
Somatic expression of LINE-1 elements in human tissues
inferred← citeshttps://doi.org/10.1099/jgv.0.000918openalex-snapshot
The integration of a macrophage-adapted live vaccine strain of equine infectious anaemia virus (EIAV) in the horse genome
inferred← citeshttps://doi.org/10.1100/tsw.2007.270openalex-snapshot
Human-Specific Endogenous Retroviruses
inferred← citeshttps://doi.org/10.1101/gr.103499.109openalex-snapshot
The genome sequence of the spontaneously hypertensive rat: Analysis and functional significance
inferred← citeshttps://doi.org/10.1101/gr.106419.110openalex-snapshot
High-throughput sequencing reveals extensive variation in human-specific L1 content in individual human genomes
inferred← citeshttps://doi.org/10.1101/gr.5558208openalex-snapshot
Mammalian non-LTR retrotransposons: For better or worse, in sickness and in health
inferred← citeshttps://doi.org/10.1128/jvi.00123-09openalex-snapshot
Human-Specific Modulation of Transcriptional Activity Provided by Endogenous Retroviral Insertions
inferred← citeshttps://doi.org/10.1134/s2079059711060049openalex-snapshot
Evolutionarily recent groups of transposable elements in the human genome
inferred← citeshttps://doi.org/10.1134/s2079086412050027openalex-snapshot
Evolutionarily recent insertions of mobile elements and their contribution to human genome structure
inferred← citeshttps://doi.org/10.1155/humu/2250030openalex-snapshot
Functional Analysis of Complex Structural and Splice‐Altering Variants in the ARSB Gene Towards the Personalized Antisense‐Based Therapy for Mucopolysaccharidosis Type VI Patients
inferred← citeshttps://doi.org/10.1186/1759-8753-3-15openalex-snapshot
Cell type-specific termination of transcription by transposable element sequences
inferred← citeshttps://doi.org/10.1186/gb-2007-8-6-r127openalex-snapshot
Comparative analysis of transposed element insertion within human and mouse genomes reveals Alu's unique role in shaping the human transcriptome
inferred← citeshttps://doi.org/10.1371/journal.pcbi.1002046openalex-snapshot
Distributions of Transposable Elements Reveal Hazardous Zones in Mammalian Introns
inferred← citeshttps://doi.org/10.1371/journal.pone.0026099openalex-snapshot
Intronic L1 Retrotransposons and Nested Genes Cause Transcriptional Interference by Inducing Intron Retention, Exonization and Cryptic Polyadenylation
inferred← citeshttps://doi.org/10.1590/s0074-02762007005000042openalex-snapshot
Coadaptation and malaria control
inferred← citeshttps://doi.org/10.21203/rs.3.rs-10975043/v1openalex-snapshot
Host-gene expression across human tissues reveals cargo-specific intronic outcomes of L1-mediated retrotransposition
inferred← citeshttps://doi.org/10.24425/pjvs.2023.145019openalex-snapshot
Review and future perspectives on the integration characteristics for equine lentivirus in the host genome
inferred← citeshttps://doi.org/10.2741/3990openalex-snapshot
Expressing genes do not forget their LINEs: transposable elements and gene expression
inferred← citeshttps://doi.org/10.3390/ijms221910887openalex-snapshot
Complex Transposon Insertion as a Novel Cause of Pompe Disease
inferred← citeshttps://doi.org/10.5372/abm.v1i2.109openalex-snapshot
Quantitative PCR analysis for methylation level of genome: clinical implications in cancer
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