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A 17-bp InDel (rs668420586) within goat CHCHD7 gene located in growth-related QTL affecting body measurement traits

https://doi.org/10.1007/s13205-020-02434-8

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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CHCHD7-PLAG1 andTCEA1-PLAG1 gene fusions resulting from cryptic, intrachromosomal 8q rearrangements in pleomorphic salivary gland adenomas

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The nonsense-mediated mRNA decay (NMD) pathway differentially regulates COX17, COX19 and COX23 mRNAs

inferredcites →https://doi.org/10.1007/s00428-011-1063-4openalex-snapshot

Aberrant PLAG1 expression in pleomorphic adenomas of the salivary gland: a molecular genetic and immunohistochemical study

inferredcites →https://doi.org/10.1007/s10048-014-0421-1openalex-snapshot

Mutation in the novel nuclear-encoded mitochondrial protein CHCHD10 in a family with autosomal dominant mitochondrial myopathy

inferredcites →https://doi.org/10.1007/s13258-017-0610-zopenalex-snapshot

Deciphering signature of selection affecting beef quality traits in Angus cattle

inferredcites →https://doi.org/10.1016/j.anireprosci.2017.01.009openalex-snapshot

Identification of a novel 12-bp insertion/deletion (indel) of iPS-related Oct4 gene and its association with reproductive traits in male piglets

inferredcites →https://doi.org/10.1016/j.gene.2018.06.041openalex-snapshot

Detection of 19-bp deletion within PLAG1 gene and its effect on growth traits in cattle

inferredcites →https://doi.org/10.1016/j.jsb.2012.07.007openalex-snapshot

Structural characterization of CHCHD5 and CHCHD7: Two atypical human twin CX9C proteins

inferredcites →https://doi.org/10.1016/j.smallrumres.2019.08.003openalex-snapshot

Insertion/deletion (InDel) variations in sheep PLAG1 gene locating in growth-related major QTL are associated with adult body weight and morphometric traits

inferredcites →https://doi.org/10.1016/j.theriogenology.2018.10.013openalex-snapshot

Two strongly linked single nucleotide polymorphisms (Q320P and V397I) in GDF9 gene are associated with litter size in cashmere goats

inferredcites →https://doi.org/10.1016/j.theriogenology.2019.01.014openalex-snapshot

Goat membrane associated ring-CH-type finger 1 (MARCH1) mRNA expression and association with litter size

inferredcites →https://doi.org/10.1016/j.theriogenology.2019.07.008openalex-snapshot

Pig SOX9: Expression profiles of Sertoli cell (SCs) and a functional 18 bp indel affecting testis weight

inferredcites →https://doi.org/10.1016/j.theriogenology.2019.07.026openalex-snapshot

A 14-bp functional deletion within the CMTM2 gene is significantly associated with litter size in goat

inferredcites →https://doi.org/10.1016/j.theriogenology.2020.01.079openalex-snapshot

Genetic effects of DSCAML1 identified in genome-wide association study revealing strong associations with litter size and semen quality in goat (Capra hircus)

inferredcites →https://doi.org/10.1016/j.tibs.2015.12.004openalex-snapshot

Mitochondrial Proteins Containing Coiled-Coil-Helix-Coiled-Coil-Helix (CHCH) Domains in Health and Disease

inferredcites →https://doi.org/10.1016/j.ygeno.2003.12.006openalex-snapshot

C2360, a nuclear protein expressed in human proliferative cytotrophoblasts, is a representative member of a novel protein family with a conserved coiled coil–helix–coiled coil–helix domain

inferredcites →https://doi.org/10.1016/s1474-4422(14)70266-2openalex-snapshot

CHCHD2 mutations in autosomal dominant late-onset Parkinson's disease: a genome-wide linkage and sequencing study

inferredcites →https://doi.org/10.1038/ng.125openalex-snapshot

Identification of ten loci associated with height highlights new biological pathways in human growth

inferredcites →https://doi.org/10.1038/ng.814openalex-snapshot

Variants modulating the expression of a chromosome domain encompassing PLAG1 influence bovine stature

inferredcites →https://doi.org/10.1038/srep44793openalex-snapshot

Functional confirmation of PLAG1 as the candidate causative gene underlying major pleiotropic effects on body weight and milk characteristics

inferredcites →https://doi.org/10.1039/c0mb00058bopenalex-snapshot

Genome-wide analysis of eukaryotic twin CX9C proteins

inferredcites →https://doi.org/10.1074/jbc.m405014200openalex-snapshot

COX23, a Homologue of COX17, Is Required for Cytochrome Oxidase Assembly

inferredcites →https://doi.org/10.1080/10495398.2018.1517770openalex-snapshot

Development of a touch-down multiplex PCR method for simultaneously rapidly detecting three novel insertion/deletions (indels) within one gene: an example for goat GHR gene

inferredcites →https://doi.org/10.1080/10495398.2019.1585865openalex-snapshot

Sheep zinc finger proteins 395 (ZNF395): insertion/deletion variations, associations with growth traits, and mRNA expression

inferredcites →https://doi.org/10.1080/19336896.2016.1211593openalex-snapshot

Application of mathematical expectation (ME) strategy for detecting low frequency mutations: An example for evaluating 14-bp insertion/deletion (indel) within the bovine PRNP gene

inferredcites →https://doi.org/10.1080/19336896.2017.1300740openalex-snapshot

Detection of a new 20-bp insertion/deletion (indel) within sheep PRND gene using mathematical expectation (ME) method

inferredcites →https://doi.org/10.1093/hmg/dds216openalex-snapshot

Early transcriptional changes linked to naturally occurring Huntington's disease mutations in neural derivatives of human embryonic stem cells

inferredcites →https://doi.org/10.1101/gad.291500.116openalex-snapshot

Transcription factor Wilms’ tumor 1 regulates developmental RNAs through 3′ UTR interaction

inferredcites →https://doi.org/10.1111/age.12617openalex-snapshot

A novel 12‐bp indel polymorphism within the GDF 9 gene is significantly associated with litter size and growth traits in goats

inferredcites →https://doi.org/10.1111/age.12871openalex-snapshot

InDels within caprine IGF 2 BP 1 intron 2 and the 3′‐untranslated regions are associated with goat growth traits

inferredcites →https://doi.org/10.1186/1471-2156-13-40openalex-snapshot

Genome-wide association study identified three major QTL for carcass weight including the PLAG1-CHCHD7 QTN for stature in Japanese Black cattle

inferredcites →https://doi.org/10.1186/1471-2156-14-52openalex-snapshot

Genome-wide association study for birth weight in Nellore cattle points to previously described orthologous genes affecting human and bovine height

inferredcites →https://doi.org/10.1186/1471-2156-15-34openalex-snapshot

Composite selection signals can localize the trait specific genomic regions in multi-breed populations of cattle and sheep

inferredcites →https://doi.org/10.1186/s12711-015-0127-3openalex-snapshot

Detection of selection signatures in dairy and beef cattle using high-density genomic information

inferredcites →https://doi.org/10.1371/journal.pone.0014726openalex-snapshot

Genome-Wide Association Study Identifies Loci for Body Composition and Structural Soundness Traits in Pigs

inferredcites →https://doi.org/10.1371/journal.pone.0073017openalex-snapshot

Genetic Characterization of the Gypsy Moth from China (Lepidoptera, Lymantriidae) Using Inter Simple Sequence Repeats Markers

inferredcites →https://doi.org/10.1530/joe-15-0449openalex-snapshot

Emerging role of PLAG1 as a regulator of growth and reproduction

inferredcites →https://doi.org/10.15698/mic2016.07.511openalex-snapshot

Cox1 mutation abrogates need for Cox23 in cytochrome c oxidase biogenesis

inferredcites →https://doi.org/10.2527/jas.2014-7337openalex-snapshot

Feed intake, average daily gain, feed efficiency, and real-time ultrasound traits in Duroc pigs: II. Genomewide association

inferredcites →https://doi.org/10.3389/fgene.2018.00091openalex-snapshot

Insertion/Deletion Within the KDM6A Gene Is Significantly Associated With Litter Size in Goat

inferredcites →https://doi.org/10.3390/ani9060379openalex-snapshot

Two Insertion/Deletion Variants within SPAG17 Gene Are Associated with Goat Body Measurement Traits

inferredcites →https://doi.org/10.3390/ani9070444openalex-snapshot

Detection of Bovine TMEM95 p.Cys161X Mutation in 13 Chinese Indigenous Cattle Breeds

inferredcites →https://doi.org/10.3390/ani9121082openalex-snapshot

The Distribution Characteristics of a 19-bp Indel of the PLAG1 Gene in Chinese Cattle

inferredcites →https://doi.org/10.5194/aab-59-151-2016openalex-snapshot

A novel 17 bp indel in the SMAD3 gene alters transcription level, contributing to phenotypic traits in Chinese cattle

inferredcites →https://doi.org/10.5194/aab-62-353-2019openalex-snapshot

A 20-bp insertion/deletion (indel) polymorphism within the CDC25A gene and its associations with growth traits in goat

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4589043openalex-extracted

inferred← citeshttps://doi.org/10.1007/s13237-026-00710-1openalex-snapshot

Fine-scale mapping and annotation of copy number variation regions in Indian goat breeds

inferred← citeshttps://doi.org/10.1016/j.gene.2022.146598openalex-snapshot

Rapid detection of InDel within the KDM3B gene in five sheep breeds using the mathematical expectation (ME) method

inferred← citeshttps://doi.org/10.1016/j.gene.2023.148095openalex-snapshot

Relationships between the mutations of the goat GATA binding protein 4 gene and growth traits

inferred← citeshttps://doi.org/10.1080/10495398.2021.1906265openalex-snapshot

Indel mutations of sheep PLAG1 gene and their associations with growth traits

inferred← citeshttps://doi.org/10.1093/jas/skae103openalex-snapshot

Pleomorphic adenoma gene1 in reproduction and implication for embryonic survival in cattle: a review

inferred← citeshttps://doi.org/10.1111/jbg.12666openalex-snapshot

Unravelling the effect of environment on the genome of Sarda breed ewes using Runs of Homozygosity

inferred← citeshttps://doi.org/10.1134/s1022795422120158openalex-snapshot

Genome-Wide Selection Signal Analysis of Australian Boer Goat by Insertion/Deletion Variants

inferred← citeshttps://doi.org/10.22541/au.170667730.05894070/v1openalex-snapshot

Genome-wide selection signal analysis of Australian Boer goat by using insertion/deletion variants

inferred← citeshttps://doi.org/10.29050/harranziraat.1969771openalex-snapshot

Association between the CHCHD7 gene variation and early growth performance in Kabakulak goats

inferred← citeshttps://doi.org/10.3389/fgene.2025.1539056openalex-snapshot

Genome-wide association study for feed efficiency indicator traits in Nellore cattle considering genotype-by-environment interactions

inferred← citeshttps://doi.org/10.3390/ani11072064openalex-snapshot

Detection of 15-bp Deletion Mutation within PLAG1 Gene and Its Effects on Growth Traits in Goats

inferred← citeshttps://doi.org/10.3390/cells12040539openalex-snapshot

Bovine HOXA11 Gene Identified from RNA-Seq: mRNA Profile Analysis and Genetic Variation Detection Using ME Method and Their Associations with Carcass Traits

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