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RNA-seq based whole transcriptome analysis of the cyclopoid copepod Paracyclopina nana focusing on xenobiotics metabolism
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/9780470277522.ch18openalex-snapshot
Culture of Copepods and Applications to Marine Finfish Larval Rearing Workshop Discussion Summary
inferredcites →https://doi.org/10.1007/pl00000897openalex-snapshot
Cytochromes P450 and metabolism of xenobiotics
inferredcites →https://doi.org/10.1007/s102010170016openalex-snapshot
Second record of Cyclopina kiraensis , a small, brackish-water cyclopoid copepod, in Japan
inferredcites →https://doi.org/10.1016/0044-8486(95)01064-5openalex-snapshot
Sustained mass culture of Amphiascoides atopus a marine harpacticoid copepod in a recirculating system
inferredcites →https://doi.org/10.1016/b978-012088523-7/50017-xopenalex-snapshot
Structure, Function, and Regulation of Carboxylesterases
inferredcites →https://doi.org/10.1016/j.aquaculture.2006.01.015openalex-snapshot
Effects of diets on the growth of the brackish water cyclopoid copepod Paracyclopina nana Smirnov
inferredcites →https://doi.org/10.1016/j.aquaculture.2008.01.041openalex-snapshot
Management of nauplius production in the paracalanid, Bestiolina similis (Crustacea: Copepoda): Effects of stocking densities and culture dilution
inferredcites →https://doi.org/10.1016/j.aquatox.2007.04.005openalex-snapshot
The copepod Tigriopus: A promising marine model organism for ecotoxicology and environmental genomics
inferredcites →https://doi.org/10.1016/j.aquatox.2014.04.008openalex-snapshot
Effects of benzo[a]pyrene on whole cytochrome P450-involved molecular responses in the marine medaka Oryzias melastigma
inferredcites →https://doi.org/10.1016/j.aquatox.2014.04.027openalex-snapshot
Crude oil exposure results in oxidative stress-mediated dysfunctional development and reproduction in the copepod Tigriopus japonicus and modulates expression of cytochrome P450 (CYP) genes
inferredcites →https://doi.org/10.1016/j.cbi.2006.07.001openalex-snapshot
Structure, function and regulation of carboxylesterases
inferredcites →https://doi.org/10.1016/j.gene.2009.01.005openalex-snapshot
The complete mitochondrial genome of the cyclopoid copepod Paracyclopina nana: A highly divergent genome with novel gene order and atypical gene numbers
inferredcites →https://doi.org/10.1016/j.marenvres.2009.12.003openalex-snapshot
The copepod Tigriopus japonicus genomic DNA information (574Mb) and molecular anatomy
inferredcites →https://doi.org/10.1016/j.margen.2014.02.005openalex-snapshot
Discovery of sex-related genes through high-throughput transcriptome sequencing from the salmon louse Caligus rogercresseyi
inferredcites →https://doi.org/10.1016/j.pharmthera.2004.10.013openalex-snapshot
UDP-glucuronosyltransferases and clinical drug-drug interactions
inferredcites →https://doi.org/10.1016/s0021-9258(19)50219-8openalex-snapshot
Glutathione S-transferases, structure, regulation, and therapeutic implications
inferredcites →https://doi.org/10.1016/s0044-8486(00)00582-2openalex-snapshot
Development and population dynamics of Tisbe biminiensis (Copepoda: Harpacticoida) reared on different diets
inferredcites →https://doi.org/10.1016/s0090-9556(24)15055-6openalex-snapshot
In Vitro Biotransformation of Sildenafil (Viagra): Identification of Human Cytochromes and Potential Drug Interactions
inferredcites →https://doi.org/10.1016/s1359-6446(05)03383-0openalex-snapshot
Keynote review: Mammalian carboxylesterases: From drug targets to protein therapeutics
inferredcites →https://doi.org/10.1021/acs.est.5b01244openalex-snapshot
Identification of the Full 46 Cytochrome P450 (CYP) Complement and Modulation of CYP Expression in Response to Water-Accommodated Fractions of Crude Oil in the Cyclopoid Copepod Paracyclopina nana
inferredcites →https://doi.org/10.1021/es400186ropenalex-snapshot
Whole Spectrum of Cytochrome P450 Genes and Molecular Responses to Water-Accommodated Fractions Exposure in the Marine Medaka
inferredcites →https://doi.org/10.1021/es403269vopenalex-snapshot
Expression Pattern of Entire Cytochrome P450 Genes and Response of Defensomes in the Benzo[a]pyrene-Exposed Monogonont Rotifer Brachionus koreanus
inferredcites →https://doi.org/10.1021/tx00022a001openalex-snapshot
Oxidation of toxic and carcinogenic chemicals by human cytochrome P-450 enzymes
inferredcites →https://doi.org/10.1038/nbt.1883openalex-snapshot
Full-length transcriptome assembly from RNA-Seq data without a reference genome
inferredcites →https://doi.org/10.1038/nrg3068openalex-snapshot
Next-generation transcriptome assembly
inferredcites →https://doi.org/10.1080/10408449991349186openalex-snapshot
Genetic Polymorphisms of Human N -Acetyltransferase, Cytochrome P450, Glutathione-S-Transferase, and Epoxide Hydrolase Enzymes: Relevance to Xenobiotic Metabolism and Toxicity
inferredcites →https://doi.org/10.1093/bioinformatics/17.9.847openalex-snapshot
InterProScan – an integration platform for the signature-recognition methods in InterPro
inferredcites →https://doi.org/10.1093/bioinformatics/bti610openalex-snapshot
Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research
inferredcites →https://doi.org/10.1093/bioinformatics/btp324openalex-snapshot
Fast and accurate short read alignment with Burrows–Wheeler transform
inferredcites →https://doi.org/10.1093/bioinformatics/btp352openalex-snapshot
The Sequence Alignment/Map format and SAMtools
inferredcites →https://doi.org/10.1093/bioinformatics/btp698openalex-snapshot
Fast and accurate long-read alignment with Burrows–Wheeler transform
inferredcites →https://doi.org/10.1093/bioinformatics/bts094openalex-snapshot
Oases:robustde novoRNA-seq assembly across the dynamic range of expression levels
inferredcites →https://doi.org/10.1093/bioinformatics/btu031openalex-snapshot
InterProScan 5: genome-scale protein function classification
inferredcites →https://doi.org/10.1097/00008571-199602000-00002openalex-snapshot
P450 superfamily: update on new sequences, gene mapping, accession numbers and nomenclature
inferredcites →https://doi.org/10.1126/science.1197761openalex-snapshot
The Ecoresponsive Genome of Daphnia pulex
inferredcites →https://doi.org/10.1155/2014/493825openalex-snapshot
Comprehensive Transcriptome Study to Develop Molecular Resources of the CopepodCalanus sinicusfor Their Potential Ecological Applications
inferredcites →https://doi.org/10.1186/1471-2164-14-538openalex-snapshot
Analysis of the transcriptome of the Indonesian coelacanth Latimeria menadoensis
inferredcites →https://doi.org/10.1186/1471-2164-15-651openalex-snapshot
Genome-wide identification of whole ATP-binding cassette (ABC) transporters in the intertidal copepod Tigriopus japonicus
inferredcites →https://doi.org/10.1208/aapsj080112openalex-snapshot
Cytochrome P450s and other enzymes in drug metabolism and toxicity
inferredcites →https://doi.org/10.1289/ehp.96104s123openalex-snapshot
Pharmacokinetics and Molecular Detoxication
inferredcites →https://doi.org/10.1371/journal.pone.0088589openalex-snapshot
De Novo Assembly of a Transcriptome for Calanus finmarchicus (Crustacea, Copepoda) – The Dominant Zooplankter of the North Atlantic Ocean
inferredcites →https://doi.org/10.1371/journal.pone.0092239openalex-snapshot
RNA-Seq Analysis Using De Novo Transcriptome Assembly as a Reference for the Salmon Louse Caligus rogercresseyi
inferredcites →https://doi.org/10.3109/03602539409029783openalex-snapshot
Biochemical Individuality and Its Implications for Drug and Carcinogen Metabolism: Recent Insights from Acetyltransferase and Cytochrome P4501a2 Phenotyping and Genotyping in Humans
inferredcites →https://doi.org/10.3109/03602539409029789openalex-snapshot
Role of Human Cytochromes P450 in the Metabolic Activation of Chemical Carcinogens and Toxins
inferredcites →https://doi.org/10.3109/10409239509083491openalex-snapshot
The Glut athione S-Transferase Supergene Family: Regulation of GST and the Contribution of the lsoenzymes to Cancer Chemoprotection and Drug Resistance Part I
inferredcites →https://doi.org/10.5507/bp.2010.017openalex-snapshot
PHASE II DRUG METABOLIZING ENZYMES
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.11646/zootaxa.5051.1.14zenodo-depositor-declared
Two new marine cyclopinids (Crustacea: Copepoda: Cyclopoida) from interstitial habitats in Korea
inferred← citeshttps://doi.org/10.1007/13836_2017_9openalex-snapshot
Population Genomics of Marine Zooplankton
inferred← citeshttps://doi.org/10.1007/s00438-021-01792-zopenalex-snapshot
Characteristics of RNA alternative splicing and its potential roles in ginsenoside biosynthesis in a single plant of ginseng, Panax ginseng C.A. Meyer
inferred← citeshttps://doi.org/10.1007/s11295-019-1348-3openalex-snapshot
Transcriptome analysis and development of SSR markers of ethnobotanical plant Sterculia lanceolata
inferred← citeshttps://doi.org/10.1007/s12562-017-1104-2openalex-snapshot
Effects of temperature on growth and fatty acid synthesis in the cyclopoid copepod Paracyclopina nana
inferred← citeshttps://doi.org/10.1007/s13205-018-1162-xopenalex-snapshot
Enrichment of genomic resources and identification of simple sequence repeats from medicinally important Clausena excavata
inferred← citeshttps://doi.org/10.1016/j.aquaculture.2016.12.037openalex-snapshot
Effects of salinity on growth, fatty acid synthesis, and expression of stress response genes in the cyclopoid copepod Paracyclopina nana
inferred← citeshttps://doi.org/10.1016/j.aquaculture.2020.734930openalex-snapshot
A comparative study of food selectivity of the benthic copepod Tigriopus japonicus and the pelagic copepod Paracyclopina nana: A genome-wide identification of fatty acid conversion genes and nitrogen isotope investigation
inferred← citeshttps://doi.org/10.1016/j.aquatox.2015.05.002openalex-snapshot
In vivo effects of UV radiation on multiple endpoints and expression profiles of DNA repair and heat shock protein (Hsp) genes in the cycloid copepod Paracyclopina nana
inferred← citeshttps://doi.org/10.1016/j.aquatox.2016.08.016openalex-snapshot
Adverse effects of MWCNTs on life parameters, antioxidant systems, and activation of MAPK signaling pathways in the copepod Paracyclopina nana
inferred← citeshttps://doi.org/10.1016/j.aquatox.2016.10.013openalex-snapshot
Potential of the small cyclopoid copepod Paracyclopina nana as an invertebrate model for ecotoxicity testing
inferred← citeshttps://doi.org/10.1016/j.aquatox.2016.12.022openalex-snapshot
Genome-wide identification of ATP-binding cassette ( ABC ) transporters and their roles in response to polycyclic aromatic hydrocarbons (PAHs) in the copepod Paracyclopina nana
inferred← citeshttps://doi.org/10.1016/j.aquatox.2019.01.020openalex-snapshot
Genome-wide identification and expression of the entire 52 glutathione S-transferase (GST) subfamily genes in the Cu2+-exposed marine copepods Tigriopus japonicus and Paracyclopina nana
inferred← citeshttps://doi.org/10.1016/j.aquatox.2021.106069openalex-snapshot
First transcriptome of the copepod Gladioferens pectinatus subjected to chronic contaminant exposures
inferred← citeshttps://doi.org/10.1016/j.bse.2016.06.010openalex-snapshot
De novo assembly and characterization of leaf transcriptome for the development of EST-SSR markers of the non-model species Indigofera szechuensis
inferred← citeshttps://doi.org/10.1016/j.cbd.2018.02.001openalex-snapshot
De novo transcriptome of the pallial gland of the date mussel ( Lithophaga lithophaga )
inferred← citeshttps://doi.org/10.1016/j.cbd.2018.08.002openalex-snapshot
RNA-Seq-based transcriptome profiling and expression of 16 cytochrome P450 genes in the benzo[α]pyrene-exposed estuarine copepod Eurytemora affinis
inferred← citeshttps://doi.org/10.1016/j.cbd.2019.03.005openalex-snapshot
Molecular physiology of copepods - from biomarkers to transcriptomes and back again
inferred← citeshttps://doi.org/10.1016/j.cbpc.2016.11.002openalex-snapshot
Ecdysone receptor (EcR) and ultraspiracle (USP) genes from the cyclopoid copepod Paracyclopina nana: Identification and expression in response to water accommodated fractions (WAFs)
inferred← citeshttps://doi.org/10.1016/j.chemosphere.2018.06.096openalex-snapshot
De novo transcriptome assembly and differential gene expression analysis of the calanoid copepod Acartia tonsa exposed to nickel nanoparticles
inferred← citeshttps://doi.org/10.1016/j.chemosphere.2020.125926openalex-snapshot
Effects of different routes of exposure to metals on bioaccumulation and population growth of the cyclopoid copepod Paracyclopina nana
inferred← citeshttps://doi.org/10.1016/j.dci.2022.104464openalex-snapshot
RNA-seq transcriptome analysis and identification of the theromacin antimicrobial peptide of the copepod Apocyclops royi
inferred← citeshttps://doi.org/10.1016/j.dci.2024.105277openalex-snapshot
Transcriptomic and microbiome analyses of copepod Apocyclops royi in response to an AHPND-causing strain of Vibrio parahaemolyticus
inferred← citeshttps://doi.org/10.1016/j.ecoenv.2020.111048openalex-snapshot
Differential gene expression profile of male and female copepods in response to cadmium exposure
inferred← citeshttps://doi.org/10.1016/j.ecoenv.2022.113756openalex-snapshot
Transcriptomic responses of the zearalenone (ZEN)-detoxifying yeast Apiotrichum mycotoxinivorans to ZEN exposure
inferred← citeshttps://doi.org/10.1016/j.ecoenv.2022.114372openalex-snapshot
Contamination of aquatic environment with anticancer reagents influences Daphnia magna – Ecotoxicogenomics approach
inferred← citeshttps://doi.org/10.1016/j.ecolmodel.2020.109379openalex-snapshot
An individual-based model for evaluating post-exposure effects of UV-B radiation on zooplankton reproduction
inferred← citeshttps://doi.org/10.1016/j.envpol.2019.05.057openalex-snapshot
Species-specific transcriptomic responses in Daphnia magna exposed to a bio-plastic production intermediate
inferred← citeshttps://doi.org/10.1016/j.jes.2020.01.021openalex-snapshot
Performance, microbial community and inhibition kinetics of long-term Cu2+ stress on an air-lift nitritation reactor with self-recirculation
inferred← citeshttps://doi.org/10.1016/j.marenvres.2018.10.017openalex-snapshot
The transcriptome of the marine calanoid copepod Temora longicornis under heat stress and recovery
inferred← citeshttps://doi.org/10.1016/j.margen.2015.08.002openalex-snapshot
Identification and molecular characterization of dorsal and dorsal-like genes in the cyclopoid copepod Paracyclopina nana
inferred← citeshttps://doi.org/10.1016/j.margen.2021.100910openalex-snapshot
De novo assembly and annotation of the whole transcriptome of Muraenesox cinereus
inferred← citeshttps://doi.org/10.1016/j.margen.2022.100954openalex-snapshot
Iso-Seq assembly and functional annotation of full-length transcriptome of turbot (Scophthalmus maximus) during bacterial infection
inferred← citeshttps://doi.org/10.1016/j.marpolbul.2016.09.048openalex-snapshot
Marine copepod cytochrome P450 genes and their applications for molecular ecotoxicological studies in response to oil pollution
inferred← citeshttps://doi.org/10.1016/j.marpolbul.2016.11.049openalex-snapshot
Cross-reactivities of mammalian MAPKs antibodies in rotifer and copepod: Application in mechanistic studies in aquatic ecotoxicology
inferred← citeshttps://doi.org/10.1021/acs.est.5b01244openalex-snapshot
Identification of the Full 46 Cytochrome P450 (CYP) Complement and Modulation of CYP Expression in Response to Water-Accommodated Fractions of Crude Oil in the Cyclopoid Copepod Paracyclopina nana
inferred← citeshttps://doi.org/10.1038/s41597-023-02842-4openalex-snapshot
MarFERReT, an open-source, version-controlled reference library of marine microbial eukaryote functional genes
inferred← citeshttps://doi.org/10.1038/s41598-026-46084-xopenalex-snapshot
The de novo transcriptome of the freshwater copepod Cyclops abyssorum tatricus reveals high-elevation adaptation
inferred← citeshttps://doi.org/10.1039/c7tx00087aopenalex-snapshot
Differential gene responses in the embryo of the green mussel Perna viridis exposed to dichlorodiphenyltrichloroethane (DDT)
inferred← citeshttps://doi.org/10.1086/694564openalex-snapshot
Molecular Characterization of Copepod Photoreception
inferred← citeshttps://doi.org/10.1089/ees.2018.0280openalex-snapshot
Microbial Community Structures' Response to Seasonal Variation in a Full-Scale Municipal Wastewater Treatment Plant
inferred← citeshttps://doi.org/10.1111/raq.12298openalex-snapshot
Transcriptomics in aquaculture: current status and applications
inferred← citeshttps://doi.org/10.1371/journal.pone.0186794openalex-snapshot
A deep transcriptomic resource for the copepod crustacean Labidocera madurae: A potential indicator species for assessing near shore ecosystem health
inferred← citeshttps://doi.org/10.3389/fgene.2022.825974openalex-snapshot
Transcriptome Analysis Reveals Olfactory System Expression Characteristics of Aquatic Snakes
inferred← citeshttps://doi.org/10.3897/zookeys.992.54856openalex-snapshot
Four new Cyclopina (Copepoda, Cyclopinidae) from South Korea
inferred← citeshttps://doi.org/10.5010/jpb.2019.46.4.274openalex-snapshot
Transcriptome analysis of a medicinal plant, Pistacia chinensis
inferred← citeshttps://doi.org/10.70675/147b19abz4bbaz4886zb46az9d023c49f7c2openalex-snapshot
Vulnérabilité de populations de poissons (Platichthys flesus) face aux multi-stress en estuaires : une approche intégrative
inferred← citeshttps://doi.org/10.70675/2f180e21z347ez425dz896eze4f51f97c271openalex-snapshot
Paracyclopina nana : a small copepod with a strong interest in ecotoxicology and aquaculture
inferred← citeshttps://doi.org/10.70675/d053eb1ez6b24z416fzba3cz3197a19b0541openalex-snapshot
Evaluation des effets chroniques du diclofénac sur un mollusque gastéropode avec des approches physiologiques, comportementales, transcriptomiques et métabolomiques
inferred← citeshttps://doi.org/10.70675/da768a22z9f4ez40ebz80d7z699c7e8d31f0openalex-snapshot
Effect of heavy metal toxicity on calanoid copepods : experimental approach
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