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Effect of selenium nanoparticles on alternative splicing in heat-stressed rainbow trout primary hepatocytes

https://doi.org/10.1016/j.cbd.2022.101042
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/biof.5520150103openalex-snapshot
Biological effects of a nano red elemental selenium
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U2AF65 enhances milk synthesis and growth of bovine mammary epithelial cells by positively regulating the mTOR‐SREBP‐1c signalling pathway
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hnRNP Proteins and Splicing Control
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The diversity of the DnaJ/Hsp40 family, the crucial partners for Hsp70 chaperones
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Localization, structure and expression of the gene for translation initiation factor eIF-4E from Drosophila melanogaster
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Increased Alternative Splicing as a Host Response to Edwardsiella ictaluri Infection in Catfish
inferredcites →https://doi.org/10.1007/s10142-019-00682-3openalex-snapshot
High-throughput sequencing reveals microRNAs in response to heat stress in the head kidney of rainbow trout (Oncorhynchus mykiss)
inferredcites →https://doi.org/10.1007/s12192-014-0514-7openalex-snapshot
Effects of heat stress on antioxidant defense system, inflammatory injury, and heat shock proteins of Muscovy and Pekin ducks: evidence for differential thermal sensitivities
inferredcites →https://doi.org/10.1016/j.aninu.2016.02.001openalex-snapshot
Responses of heat shock protein 70 and caspase-3/7 to dietary selenomethionine in juvenile white sturgeon
inferredcites →https://doi.org/10.1016/j.arr.2017.04.004openalex-snapshot
Splicing regulatory factors, ageing and age-related disease
inferredcites →https://doi.org/10.1016/j.cbd.2007.04.005openalex-snapshot
Gene expression pattern in the liver during recovery from an acute stressor in rainbow trout
inferredcites →https://doi.org/10.1016/j.cbd.2018.11.008openalex-snapshot
Heat stress induced alternative splicing in catfish as determined by transcriptome analysis
inferredcites →https://doi.org/10.1016/j.cbd.2020.100707openalex-snapshot
Identification and characterization of long noncoding RNAs provide insight into the regulation of gene expression in response to heat stress in rainbow trout (Oncorhynchus mykiss)
inferredcites →https://doi.org/10.1016/j.ceb.2005.03.002openalex-snapshot
Mechanistic links between nonsense-mediated mRNA decay and pre-mRNA splicing in mammalian cells
inferredcites →https://doi.org/10.1016/j.cell.2005.06.008openalex-snapshot
Inactivation of the SR Protein Splicing Factor ASF/SF2 Results in Genomic Instability
inferredcites →https://doi.org/10.1016/j.ecoenv.2021.113121openalex-snapshot
Protective effects of different concentrations of selenium nanoparticles on rainbow trout (Oncorhynchus mykiss) primary hepatocytes under heat stress
inferredcites →https://doi.org/10.1016/j.febslet.2014.02.061openalex-snapshot
Detection and quantification of alternative splice sites in Arabidopsis genes AtDCL2 and AtPTB2 with highly sensitive surface enhanced Raman spectroscopy (SERS) and gold nanoprobes
inferredcites →https://doi.org/10.1016/j.fsi.2019.05.008openalex-snapshot
Post-transcriptional regulation through alternative splicing after infection with Flavobacterium columnare in channel catfish (Ictalurus punctatus)
inferredcites →https://doi.org/10.1016/j.fsi.2019.10.026openalex-snapshot
Alternative splicing, spatiotemporal expression of TEP family genes in Yesso scallop (Patinopecten yessoensis) and their disparity in responses to ocean acidification
inferredcites →https://doi.org/10.1016/j.fsi.2021.01.003openalex-snapshot
Dual effect of selenium loaded chitosan nanoparticles on growth, antioxidant, immune related genes expression, transcriptomics modulation of caspase 1, cytochrome P450 and heat shock protein and Aeromonas hydrophila resistance of Nile Tilapia (Oreochromis niloticus)
inferredcites →https://doi.org/10.1016/j.gene.2017.03.041openalex-snapshot
Transcriptome analysis provides insights into hepatic responses to moderate heat stress in the rainbow trout (Oncorhynchus mykiss)
inferredcites →https://doi.org/10.1016/j.gene.2017.10.002openalex-snapshot
Acute hypoxia stress induced abundant differential expression genes and alternative splicing events in heart of tilapia
inferredcites →https://doi.org/10.1016/j.isci.2020.100929openalex-snapshot
Srsf7 Establishes the Juvenile Transcriptome through Age-Dependent Alternative Splicing in Mice
inferredcites →https://doi.org/10.1016/j.jtherbio.2017.02.003openalex-snapshot
Metabolic and cellular stress responses of catfish, Horabagrus brachysoma (Günther) acclimated to increasing temperatures
inferredcites →https://doi.org/10.1016/j.jtherbio.2019.05.014openalex-snapshot
Physiological response and miRNA-mRNA interaction analysis in the head kidney of rainbow trout exposed to acute heat stress
inferredcites →https://doi.org/10.1016/j.molcel.2006.08.021openalex-snapshot
Organization of Core Spliceosomal Components U5 snRNA Loop I and U4/U6 Di-snRNP within U4/U6.U5 Tri-snRNP as Revealed by Electron Cryomicroscopy
inferredcites →https://doi.org/10.1016/j.molcel.2018.01.011openalex-snapshot
The TIA1 RNA-Binding Protein Family Regulates EIF2AK2-Mediated Stress Response and Cell Cycle Progression
inferredcites →https://doi.org/10.1016/j.tplants.2012.06.001openalex-snapshot
Alternative splicing in plants – coming of age
inferredcites →https://doi.org/10.1016/s0092-8674(00)80806-5openalex-snapshot
Getting Newly Synthesized Proteins into Shape
inferredcites →https://doi.org/10.1016/s0378-1119(02)00687-xopenalex-snapshot
Heat shock protein genes and their functional significance in fish
inferredcites →https://doi.org/10.1016/s1097-2765(01)00409-9openalex-snapshot
Exon Identity Established through Differential Antagonism between Exonic Splicing Silencer-Bound hnRNP A1 and Enhancer-Bound SR Proteins
inferredcites →https://doi.org/10.1016/s1097-2765(03)00089-3openalex-snapshot
SR Splicing Factors Serve as Adapter Proteins for TAP-Dependent mRNA Export
inferredcites →https://doi.org/10.1021/acsami.9b12319openalex-snapshot
Selenium Nanoparticles as an Efficient Nanomedicine for the Therapy of Huntington’s Disease
inferredcites →https://doi.org/10.1038/418236aopenalex-snapshot
Alternative pre-mRNA splicing and proteome expansion in metazoans
inferredcites →https://doi.org/10.1038/nature07509openalex-snapshot
Alternative isoform regulation in human tissue transcriptomes
inferredcites →https://doi.org/10.1038/nbt.3122openalex-snapshot
StringTie enables improved reconstruction of a transcriptome from RNA-seq reads
inferredcites →https://doi.org/10.1038/nmeth.1923openalex-snapshot
Fast gapped-read alignment with Bowtie 2
inferredcites →https://doi.org/10.1038/nmeth.3317openalex-snapshot
HISAT: a fast spliced aligner with low memory requirements
inferredcites →https://doi.org/10.1038/nprot.2016.095openalex-snapshot
Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown
inferredcites →https://doi.org/10.1073/pnas.0136770100openalex-snapshot
Evidence for the widespread coupling of alternative splicing and nonsense-mediated mRNA decay in humans
inferredcites →https://doi.org/10.1073/pnas.0805569105openalex-snapshot
Up-regulation of the proapoptotic caspase 2 splicing isoform by a candidate tumor suppressor, RBM5
inferredcites →https://doi.org/10.1073/pnas.1403244111openalex-snapshot
Cartography of neurexin alternative splicing mapped by single-molecule long-read mRNA sequencing
inferredcites →https://doi.org/10.1073/pnas.1419161111openalex-snapshot
rMATS: Robust and flexible detection of differential alternative splicing from replicate RNA-Seq data
inferredcites →https://doi.org/10.1074/jbc.m117.791590openalex-snapshot
Phosphatidylinositol 3,5-bisphosphate is involved in methylglyoxal-induced activation of the Mpk1 mitogen-activated protein kinase cascade in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1080/15476286.2015.1020272openalex-snapshot
Genomic functions of U2AF in constitutive and regulated splicing
inferredcites →https://doi.org/10.1080/21541264.2018.1511676openalex-snapshot
Poor codon optimality as a signal to degrade transcripts with frameshifts
inferredcites →https://doi.org/10.1093/bioinformatics/bty560openalex-snapshot
fastp: an ultra-fast all-in-one FASTQ preprocessor
inferredcites →https://doi.org/10.1093/dnares/dss041openalex-snapshot
Genome-Wide Landscape of Alternative Splicing Events in Brachypodium distachyon
inferredcites →https://doi.org/10.1093/genetics/156.3.1157openalex-snapshot
Two Genes Become One: The Genes Encoding Heterochromatin Protein SU(VAR)3-9 and Translation Initiation Factor Subunit eIF-2γ Are Joined to a Dicistronic Unit in Holometabolic Insects
inferredcites →https://doi.org/10.1093/toxsci/kfy288openalex-snapshot
Inhalation of ZnO Nanoparticles: Splice Junction Expression and Alternative Splicing in Mice
inferredcites →https://doi.org/10.1101/gr.053678.106openalex-snapshot
Genome-wide analyses of alternative splicing in plants: Opportunities and challenges
inferredcites →https://doi.org/10.1104/pp.112.205864openalex-snapshot
An Autoregulatory Loop Controlling Arabidopsis HsfA2 Expression: Role of Heat Shock-Induced Alternative Splicing
inferredcites →https://doi.org/10.1105/tpc.113.117523openalex-snapshot
Complexity of the Alternative Splicing Landscape in Plants
inferredcites →https://doi.org/10.1111/ijlh.13433openalex-snapshot
U2AF1 expression is a novel and independent prognostic indicator of childhood T‐lineage acute lymphoblastic leukemia
inferredcites →https://doi.org/10.1111/j.1349-7006.2011.02112.xopenalex-snapshot
Heat shock protein 90 regulates phosphatidylinositol 3‐kinase‐related protein kinase family proteins together with the RUVBL1/2 and Tel2‐containing co‐factor complex
inferredcites →https://doi.org/10.1111/j.1365-2141.2008.07221.xopenalex-snapshot
BCR‐ABL1‐induced expression of HSPA8 promotes cell survival in chronic myeloid leukaemia
inferredcites →https://doi.org/10.1128/mcb.21.22.7673-7681.2001openalex-snapshot
Dual Function for U2AF 35 in AG-Dependent Pre-mRNA Splicing
inferredcites →https://doi.org/10.1139/cjpp-2016-0183openalex-snapshot
Anti-inflammatory effect of selenium nanoparticles on the inflammation induced in irradiated rats
inferredcites →https://doi.org/10.1152/ajpcell.00091.2013openalex-snapshot
Oxidative stress-inducible truncated serine/arginine-rich splicing factor 3 regulates interleukin-8 production in human colon cancer cells
inferredcites →https://doi.org/10.1152/ajpregu.00158.2011openalex-snapshot
Thermal acclimation in Antarctic fish: transcriptomic profiling of metabolic pathways
inferredcites →https://doi.org/10.1155/2015/802153openalex-snapshot
iTRAQ-Based Quantitative Proteomic Analysis Identified HSC71 as a Novel Serum Biomarker for Renal Cell Carcinoma
inferredcites →https://doi.org/10.1158/0008-5472.can-18-3965openalex-snapshot
SF3B2-Mediated RNA Splicing Drives Human Prostate Cancer Progression
inferredcites →https://doi.org/10.1186/1471-2164-10-s1-s5openalex-snapshot
Comprehensive splicing graph analysis of alternative splicing patterns in chicken, compared to human and mouse
inferredcites →https://doi.org/10.1186/1471-2164-9-456openalex-snapshot
Promoter-sharing by different genes in human genome – CPNE1 and RBM12 gene pair as an example
inferredcites →https://doi.org/10.1186/s12870-021-02966-yopenalex-snapshot
The role of RNA-binding protein, microRNA and alternative splicing in seed germination: a field need to be discovered
inferredcites →https://doi.org/10.1186/s13059-014-0550-8openalex-snapshot
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
inferredcites →https://doi.org/10.1210/en.2013-2131openalex-snapshot
Leptin Signaling in the Rainbow Trout Central Nervous System Is Modulated by a Truncated Leptin Receptor Isoform
inferredcites →https://doi.org/10.1242/jeb.201.17.2543openalex-snapshot
Effects of heat shock and hypoxia on protein synthesis in rainbow trout (Oncorhynchus mykiss) cells
inferredcites →https://doi.org/10.1261/rna.1908309openalex-snapshot
Physical and genetic interactions of yeast Cwc21p, an ortholog of human SRm300/SRRM2, suggest a role at the catalytic center of the spliceosome
inferredcites →https://doi.org/10.1371/journal.pgen.1001393openalex-snapshot
Comparative Analysis of Proteome and Transcriptome Variation in Mouse
inferredcites →https://doi.org/10.14348/molcells.2017.2319openalex-snapshot
SR Proteins: Binders, Regulators, and Connectors of RNA
inferredcites →https://doi.org/10.1515/biolog-2016-0013openalex-snapshot
Effects of heat stress on serum Cortisol, alkaline phosphatase activity and heat shock protein 40 and 90β mRNA expression in rainbow trout Oncorhynchus mykiss
inferredcites →https://doi.org/10.21037/atm.2016.12.62openalex-snapshot
Nanodiamonds and nanoparticles as tumor cell radiosensitizers—promising results but an obscure mechanism of action
inferredcites →https://doi.org/10.2152/jmi.63.219openalex-snapshot
Serine/arginine-rich splicing factor 7 regulates p21-dependent growth arrest in colon cancer cells
inferredcites →https://doi.org/10.3389/fgene.2020.00244openalex-snapshot
Genome-Wide Characterization of Alternative Splicing Events and Their Responses to Cold Stress in Tilapia
inferredcites →https://doi.org/10.3389/fgene.2021.693780openalex-snapshot
Alpha-Enolase Protects Hepatocyte Against Heat Stress Through Focal Adhesion Kinase-Mediated Phosphatidylinositol 3-Kinase/Akt Pathway
inferredcites →https://doi.org/10.3389/fimmu.2019.00152openalex-snapshot
Rainbow Trout (Oncorhynchus Mykiss) Intestinal Epithelial Cells as a Model for Studying Gut Immune Function and Effects of Functional Feed Ingredients
inferredcites →https://doi.org/10.3389/fmars.2021.815109openalex-snapshot
PacBio Isoform Sequencing and Illumina RNA Sequencing Provide Novel Insights on Responses to Acute Heat Stress in Apostichopus japonicus Coelomocytes
inferredcites →https://doi.org/10.3389/fpls.2015.00437openalex-snapshot
Circadian rhythms and post-transcriptional regulation in higher plants
inferredcites →https://doi.org/10.3390/cells10030679openalex-snapshot
SRSF9 Regulates Cassette Exon Splicing of Caspase-2 by Interacting with Its Downstream Exon
inferredcites →https://doi.org/10.3390/genes11121520openalex-snapshot
Analysis of Whole Transcriptome RNA-seq Data Reveals Many Alternative Splicing Events in Soybean Roots under Drought Stress Conditions
inferredcites →https://doi.org/10.3390/plants10081647openalex-snapshot
Reading between the Lines: RNA-seq Data Mining Reveals the Alternative Message of the Rice Leaf Transcriptome in Response to Heat Stress
inferredcites →https://doi.org/10.4238/2015.may.18.20openalex-snapshot
Short Communication Effect of heat stress on heat-shock protein (Hsp60) mRNA expression in rainbow trout Oncorhynchus mykiss
inferredcites →https://doi.org/10.7150/ijbs.46751openalex-snapshot
Serine/arginine-rich splicing factors: the bridge linking alternative splicing and cancer

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4621344openalex-extracted
Characteristics Analysis and Intestinal Effects of Probiotic-Derived Nano-Selenium by Lactobacilllus Bulgaricus Cicc 20247
inferred← citeshttps://doi.org/10.1007/s10126-024-10382-0openalex-snapshot
Effect of Selenium Nanoparticles on Alternative Splicing of Rainbow Trout Head Kidney under Heat Stress
inferred← citeshttps://doi.org/10.1007/s10126-025-10558-2openalex-snapshot
Dynamic Changes in Serum Biochemical Indices and Alternative Splicing Events Revealed Molecular Regulatory Mechanisms in Rainbow Trout Under Copper Stress
inferred← citeshttps://doi.org/10.1016/j.aqrep.2025.102627openalex-snapshot
Modulatory effects of selenium nanoparticles on gut microbiota and metabolites of juvenile Nile tilapia (Oreochromis niloticus) by microbiome-metabolomic analysis
inferred← citeshttps://doi.org/10.1016/j.cirep.2023.200127openalex-snapshot
A review of the quantitative real-time PCR and Omics approaches applied to study the effects of dietary selenium nanoparticles (nano-Se) on fish
inferred← citeshttps://doi.org/10.1016/j.fsi.2023.109275openalex-snapshot
Effects of miR-722 on gene expression and alternative splicing in the liver of half-smooth tongue sole after infection with Vibrio anguillarum
inferred← citeshttps://doi.org/10.1016/j.fsi.2024.109601openalex-snapshot
Role of alternative splicing in fish immunity
inferred← citeshttps://doi.org/10.1088/1755-1315/1262/6/062006openalex-snapshot
Evaluation of Vitamin D3-Conjugated Selenium Nanoparticles (Se-NPs) on White Blood Cells, Liver, and Kidney Functions in Induced Immunosuppressed Rats
inferred← citeshttps://doi.org/10.1186/s12951-024-02994-4openalex-snapshot
Enhanced antiviral defense against begomoviral infection in Nicotiana benthamiana through strategic utilization of fluorescent carbon quantum dots to activate plant immunity
inferred← citeshttps://doi.org/10.2139/ssrn.4830696openalex-snapshot
大口黑鲈(Micropterus salmoides)高温胁迫下选择性剪接的调控机制
inferred← citeshttps://doi.org/10.3390/ani14203005openalex-snapshot
Analysis of Differential Alternative Splicing in Largemouth Bass After High Temperature Exposure
inferred← citeshttps://doi.org/10.3390/genes16030267openalex-snapshot
Transcriptome Analysis of Environmental Adaptation of Largemouth Bass (Micropterus salmonides)
inferred← citeshttps://doi.org/10.3390/ijms252212098openalex-snapshot
Integration of mRNA and miRNA Analysis Sheds New Light on the Muscle Response to Heat Stress in Spotted Sea Bass (Lateolabrax maculatus)
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