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Biodegradation mechanism of polyesters by hydrolase from Rhodopseudomonas palustris: An in silico approach

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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C hem S hell—a modular software package for QM / MM simulations
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The M06 suite of density functionals for main group thermochemistry, thermochemical kinetics, noncovalent interactions, excited states, and transition elements: two new functionals and systematic testing of four M06-class functionals and 12 other functionals
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Electronic structure calculations on workstation computers: The program system turbomole
inferredcites →https://doi.org/10.1016/j.addr.2016.03.012openalex-snapshot
Biocompatibility and safety of PLA and its copolymers
inferredcites →https://doi.org/10.1016/j.addr.2016.04.003openalex-snapshot
PLA composites: From production to properties
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PLA micro- and nano-particles
inferredcites →https://doi.org/10.1016/j.addr.2016.06.012openalex-snapshot
Physical and mechanical properties of PLA, and their functions in widespread applications — A comprehensive review
inferredcites →https://doi.org/10.1016/j.cbpa.2007.01.684openalex-snapshot
QM/MM studies of enzymes
inferredcites →https://doi.org/10.1016/j.cogsc.2018.03.011openalex-snapshot
Recent developments in recycling of polystyrene based plastics
inferredcites →https://doi.org/10.1016/j.cpc.2012.09.022openalex-snapshot
SPFP: Speed without compromise—A mixed precision model for GPU accelerated molecular dynamics simulations
inferredcites →https://doi.org/10.1016/j.ibiod.2017.01.010openalex-snapshot
New advances in the biodegradation of Poly(lactic) acid
inferredcites →https://doi.org/10.1016/j.jmgm.2005.12.005openalex-snapshot
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inferredcites →https://doi.org/10.1016/j.msec.2017.11.006openalex-snapshot
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inferredcites →https://doi.org/10.1016/j.polymdegradstab.2017.01.009openalex-snapshot
Abiotic and biotic environmental degradation of the bioplastic polymer poly(lactic acid): A review
inferredcites →https://doi.org/10.1016/j.rser.2017.05.143openalex-snapshot
Hydrolytic degradation of polylactic acid (PLA) and its composites
inferredcites →https://doi.org/10.1016/s0263-7855(96)00043-4openalex-snapshot
DL_POLY_2.0: A general-purpose parallel molecular dynamics simulation package
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Biochemical and Structural Insights into Enzymatic Depolymerization of Polylactic Acid and Other Polyesters by Microbial Carboxylesterases
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Thyroid Disruption by Bisphenol S Analogues via Thyroid Hormone Receptor β: in Vitro , in Vivo , and Molecular Dynamics Simulation Study
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ff14SB: Improving the Accuracy of Protein Side Chain and Backbone Parameters from ff99SB
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Versatile Imidazole-Anion-Derived Ionic Liquids with Unparalleled Activity for Alcoholysis of Polyester Wastes under Mild and Green Conditions
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inferredcites →https://doi.org/10.1023/b:bile.0000025927.31028.e3openalex-snapshot
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inferredcites →https://doi.org/10.1038/s41467-018-03104-3openalex-snapshot
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Microplastic contamination of river beds significantly reduced by catchment-wide flooding
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inferredcites →https://doi.org/10.1039/c8cp03561jopenalex-snapshot
Computational evidence for the degradation mechanism of haloalkane dehalogenase LinB and mutants of Leu248 to 1-chlorobutane
inferredcites →https://doi.org/10.1063/1.445869openalex-snapshot
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inferredcites →https://doi.org/10.1126/sciadv.1700715openalex-snapshot
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inferredcites →https://doi.org/10.1126/sciadv.aap8060openalex-snapshot
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inferredcites →https://doi.org/10.1126/science.1094559openalex-snapshot
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inferredcites →https://doi.org/10.1126/science.282.5395.1877openalex-snapshot
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inferredcites →https://doi.org/10.1126/science.297.5582.803openalex-snapshot
Biodegradable Polymers for the Environment
inferredcites →https://doi.org/10.1128/aem.63.4.1637-1640.1997openalex-snapshot
Polylactide Degradation by an Amycolatopsis sp
inferredcites →https://doi.org/10.1517/17460441.2015.1032936openalex-snapshot
The MM/PBSA and MM/GBSA methods to estimate ligand-binding affinities
inferredcites →https://doi.org/10.2210/pdb4psu/pdbopenalex-snapshot
Crystal structure of alpha/beta hydrolase from Rhodopseudomonas palustris CGA009

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4793873openalex-extracted
Exploring the Anaerobic Degradation and Metabolic Pathway of Hexabromocyclododecane by Rhodopseudomonas palustris
inferred← citeshttps://doi.org/10.1002/jctb.6745openalex-snapshot
Insights into polyester plastic biodegradation by carboxyl ester hydrolases
inferred← citeshttps://doi.org/10.1007/978-981-32-9559-9_1openalex-snapshot
Properties of Recycled Polyester
inferred← citeshttps://doi.org/10.1007/s11270-025-07972-6openalex-snapshot
Exploring the Role of Plant Growth-Promoting Bacteria in Biodegradation of Plastic: A Review
inferred← citeshttps://doi.org/10.1016/j.biotechadv.2022.108001openalex-snapshot
Rhodopseudomonas palustris: A biotechnology chassis
inferred← citeshttps://doi.org/10.1016/j.chemosphere.2020.126803openalex-snapshot
Fluoroacetate dehalogenase catalyzed dehalogenation of halogenated carboxylic acids: A QM/MM approach
inferred← citeshttps://doi.org/10.1016/j.comptc.2021.113399openalex-snapshot
Influence of the quantum mechanical region size in QM/MM modelling: A case study of fluoroacetate dehalogenase catalyzed C F bond cleavage
inferred← citeshttps://doi.org/10.1016/j.jece.2026.124975openalex-snapshot
Balancing rigidity and flexibility in enzyme engineering for green recycling of ester-based plastics and plasticizers: A review
inferred← citeshttps://doi.org/10.1016/j.jhazmat.2022.129287openalex-snapshot
Critical effect of biodegradation on long-term microplastic weathering in sediment environments: A systematic review
inferred← citeshttps://doi.org/10.1016/j.scitotenv.2019.135897openalex-snapshot
Degradation mechanism for Zearalenone ring-cleavage by Zearalenone hydrolase RmZHD: A QM/MM study
inferred← citeshttps://doi.org/10.1016/j.tibtech.2024.08.013openalex-snapshot
Engineering the mangrove soil microbiome for selection of polyethylene terephthalate-transforming bacterial consortia
inferred← citeshttps://doi.org/10.1128/spectrum.00362-23openalex-snapshot
Deconstructed Plastic Substrate Preferences of Microbial Populations from the Natural Environment
inferred← citeshttps://doi.org/10.1155/2020/3419034openalex-snapshot
D‐Lactic Acid as a Metabolite: Toxicology, Diagnosis, and Detection
inferred← citeshttps://doi.org/10.1186/s40643-024-00793-1openalex-snapshot
Biodegradation: the best solution to the world problem of discarded polymers
inferred← citeshttps://doi.org/10.57634/rcr5069openalex-snapshot
Catalytic degradation of microplastics
inferred← citeshttps://doi.org/10.6084/m9.figshare.26758408openalex-snapshot
Additional file 1 of Biodegradation: the best solution to the world problem of discarded polymers
inferred← citeshttps://doi.org/10.6084/m9.figshare.26758411openalex-snapshot
Additional file 2 of Biodegradation: the best solution to the world problem of discarded polymers
inferred← citeshttps://doi.org/10.7717/peerj.13618openalex-snapshot
Pollution caused by nanoplastics: adverse effects and mechanisms of interaction via molecular simulation
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