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Fungal genetic biodiversity and metabolic activity as an indicator of potential biological weathering and soil formation – Case study of towards a better understanding of Earth system dynamics

https://doi.org/10.1016/j.ecolind.2022.109136

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/9781119413332.ch1openalex-snapshot

Biological Weathering in the Terrestrial System

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Microbial Weathering of Minerals and Rocks in Natural Environments

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Local‐ and regional‐scale biomorphodynamics due to tree uprooting in semi‐natural and managed montane forests of the Sudetes Mountains, Central Europe

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Biomechanical effects of trees in an old‐growth temperate forest

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Arbuscular Mycorrhizal Symbiosis and Other Plant–Soil Interactions in Relation to Environmental Stress

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Mineral nutrient mobilization by plants from rock: influence of rock type and arbuscular mycorrhiza

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Trees: a powerful geomorphic agent governing the landscape evolution of a subtropical wetland

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Rock-eating mycorrhizas: their role in plant nutrition and biogeochemical cycles

inferredcites →https://doi.org/10.1007/s11104-016-3040-9openalex-snapshot

Advances in the rhizosphere: stretching the interface of life

inferredcites →https://doi.org/10.1007/s13225-020-00466-2openalex-snapshot

FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles

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Endophytic Microbes, Evolution and Diversification of

inferredcites →https://doi.org/10.1016/j.catena.2018.10.018openalex-snapshot

A study of the wood anatomy of Picea abies roots and their role in biomechanical weathering of rock cracks

inferredcites →https://doi.org/10.1016/j.cj.2016.01.010openalex-snapshot

Phytohormones and their metabolic engineering for abiotic stress tolerance in crop plants

inferredcites →https://doi.org/10.1016/j.earscirev.2012.03.005openalex-snapshot

Weathering and the global carbon cycle: Geomorphological perspectives

inferredcites →https://doi.org/10.1016/j.earscirev.2013.08.007openalex-snapshot

The role of trees in the geomorphic system of forested hillslopes — A review

inferredcites →https://doi.org/10.1016/j.earscirev.2016.06.002openalex-snapshot

Roots, rock, and regolith: Biomechanical and biochemical weathering by trees and its impact on hillslopes—A critical literature review

inferredcites →https://doi.org/10.1016/j.earscirev.2020.103200openalex-snapshot

Impact of trees and forests on the Devonian landscape and weathering processes with implications to the global Earth's system properties - A critical review

inferredcites →https://doi.org/10.1016/j.ecocom.2016.07.005openalex-snapshot

The dark side of the “redundancy hypothesis” and ecosystem assessment

inferredcites →https://doi.org/10.1016/j.fbr.2010.03.002openalex-snapshot

The role of fungi in biogenic weathering in boreal forest soils

inferredcites →https://doi.org/10.1016/j.geoderma.2004.11.023openalex-snapshot

Ectomycorrhizae in a soil-weathered granitic bedrock regolith: linking matrix resources to plants

inferredcites →https://doi.org/10.1016/j.geomorph.2011.03.021openalex-snapshot

Microbial geomorphology: A neglected link between life and landscape

inferredcites →https://doi.org/10.1016/j.geomorph.2021.107985openalex-snapshot

Biogeomorphological evolution of rocky hillslopes driven by roots in campos rupestres, Brazil

inferredcites →https://doi.org/10.1016/j.mimet.2008.01.003openalex-snapshot

16S rDNA analysis reveals low microbial diversity in community level physiological profile assays

inferredcites →https://doi.org/10.1016/j.mycres.2006.12.001openalex-snapshot

Geomycology: biogeochemical transformations of rocks, minerals, metals and radionuclides by fungi, bioweathering and bioremediation

inferredcites →https://doi.org/10.1016/j.tim.2009.05.004openalex-snapshot

Mineral weathering by bacteria: ecology, actors and mechanisms

inferredcites →https://doi.org/10.1016/j.tplants.2016.01.009openalex-snapshot

Root–Root Interactions: Towards A Rhizosphere Framework

inferredcites →https://doi.org/10.1016/s0169-5347(01)02122-xopenalex-snapshot

Linking plants to rocks: ectomycorrhizal fungi mobilize nutrients from minerals

inferredcites →https://doi.org/10.1023/a:1005948126251openalex-snapshot

Why do Tree Species Affect Soils? The Warp and Woof of Tree-soil Interactions

inferredcites →https://doi.org/10.1038/nmeth.3869openalex-snapshot

DADA2: High-resolution sample inference from Illumina amplicon data

inferredcites →https://doi.org/10.1038/s41598-019-40819-9openalex-snapshot

Links between physical and chemical weathering inferred from a 65-m-deep borehole through Earth’s critical zone

inferredcites →https://doi.org/10.1055/s-2004-821100openalex-snapshot

Microbial Populations and Activities in the Rhizoplane of Rock‐Weathering Desert Plants. I. Root Colonization and Weathering of Igneous Rocks

inferredcites →https://doi.org/10.1098/rsbl.2012.0503openalex-snapshot

Evolution of trees and mycorrhizal fungi intensifies silicate mineral weathering

inferredcites →https://doi.org/10.1111/1462-2920.14749openalex-snapshot

Organic acids, siderophores, enzymes and mechanical pressure for black slate bioweathering with the basidiomycete Schizophyllum commune

inferredcites →https://doi.org/10.1111/j.1467-8306.2006.00476.xopenalex-snapshot

Biomechanical Effects of Trees on Soil and Regolith: Beyond Treethrow

inferredcites →https://doi.org/10.1111/j.1469-8137.2008.02427.xopenalex-snapshot

Soil depth, plant rooting strategies and species’ niches

inferredcites →https://doi.org/10.1111/j.1472-4669.2010.00264.xopenalex-snapshot

Twelve testable hypotheses on the geobiology of weathering

inferredcites →https://doi.org/10.1111/j.1574-6941.2002.tb00990.xopenalex-snapshot

Analysis of microbial community functional diversity using sole-carbon-source utilisation profiles – a critique

inferredcites →https://doi.org/10.1111/j.1574-6968.2008.01239.xopenalex-snapshot

Bioweathering of chrysotile by fungi isolated in ophiolitic sites

inferredcites →https://doi.org/10.1128/aem.00062-07openalex-snapshot

Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy

inferredcites →https://doi.org/10.1128/aem.00726-15openalex-snapshot

Fungal Bioweathering of Mimetite and a General Geomycological Model for Lead Apatite Mineral Biotransformations

inferredcites →https://doi.org/10.1128/aem.57.8.2351-2359.1991openalex-snapshot

Classification and Characterization of Heterotrophic Microbial Communities on the Basis of Patterns of Community-Level Sole-Carbon-Source Utilization

inferredcites →https://doi.org/10.1130/g38449.1openalex-snapshot

Mineral weathering and soil development in the earliest land plant ecosystems

inferredcites →https://doi.org/10.1134/s1064229311010121openalex-snapshot

The role of soil biota in the weathering of minerals: A review of literature

inferredcites →https://doi.org/10.1134/s1064229315050099openalex-snapshot

Specificity of soil properties in the rhizosphere: Analysis of literature data

inferredcites →https://doi.org/10.1155/2014/250693openalex-snapshot

Impact of Endophytic Microorganisms on Plants, Environment and Humans

inferredcites →https://doi.org/10.1180/0026461036760154openalex-snapshot

Fungal involvement in bioweathering and biotransformation of rocks and minerals

inferredcites →https://doi.org/10.1186/gb-2011-12-6-r60openalex-snapshot

Metagenomic biomarker discovery and explanation

inferredcites →https://doi.org/10.1371/journal.pone.0061217openalex-snapshot

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

inferredcites →https://doi.org/10.14806/ej.17.1.200openalex-snapshot

Cutadapt removes adapter sequences from high-throughput sequencing reads

inferredcites →https://doi.org/10.17221/171/2017-pseopenalex-snapshot

Microbial community diversity and the interaction of soil under maize growth in different cultivation techniques

inferredcites →https://doi.org/10.1890/1540-9295(2004)002[0258:trofiw]2.0.co;2openalex-snapshot

The Role of Fungi in Weathering

inferredcites →https://doi.org/10.2113/gselements.3.5.327openalex-snapshot

Coupling between Biota and Earth Materials in the Critical Zone

inferredcites →https://doi.org/10.2136/sssaj2007.0400openalex-snapshot

Rapid Clay Weathering in the Rhizosphere of Norway Spruce and Oak in an Acid Forest Ecosystem

inferredcites →https://doi.org/10.2307/2260332openalex-snapshot

Trees and Wildlife in the Scottish Uplands.

inferredcites →https://doi.org/10.3389/fmicb.2016.00201openalex-snapshot

Bioweathering Potential of Cultivable Fungi Associated with Semi-Arid Surface Microhabitats of Mayan Buildings

inferredcites →https://doi.org/10.3389/fmicb.2018.00707openalex-snapshot

Fungal Biodiversity and Their Role in Soil Health

inferredcites →https://doi.org/10.3389/fmicb.2019.00006openalex-snapshot

Fungal Biodiversity of the Most Common Types of Polish Soil in a Long-Term Microplot Experiment

inferredcites →https://doi.org/10.3390/agriculture12020128openalex-snapshot

Can the Biological Activity of Abandoned Soils Be Changed by the Growth of Paulownia elongata × Paulownia fortunei?—Preliminary Study on a Young Tree Plantation

inferredcites →https://doi.org/10.3390/microorganisms9091943openalex-snapshot

Fungi in Permafrost-Affected Soils of the Canadian Arctic: Horizon- and Site-Specific Keystone Taxa Revealed by Co-Occurrence Network

inferredcites →https://doi.org/10.5066/f7nv9g9copenalex-snapshot

2015 Hydrologic and soil data collected in limestone cedar glades at Stones River National Battlefield, Tennessee

inferredcites →https://doi.org/10.5194/bg-14-5115-2017openalex-snapshot

Reviews and syntheses: on the roles trees play in building and plumbing the critical zone

inferredcites →https://doi.org/10.5194/bg-8-3531-2011openalex-snapshot

Where microorganisms meet rocks in the Earth's Critical Zone

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Strategic Soil Management Systems and the Mycobiome Structure - New Perspectives in Response to Reduced Nitrogen Fertilization in Accordance with the EU "from Field to Table" Directive

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Role of Cryoconite Translocation on the Biogeochemical Features of Alpine Soils at the Central Caucasus Region, Mount Elbrus

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Functional Microbial Diversity in the Study of Soils of Various Ecosystems

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A comprehensive review of recent advances in the applications and biosynthesis of oxalic acid from bio-derived substrates

inferred← citeshttps://doi.org/10.1016/j.ibiod.2023.105670openalex-snapshot

Comparative analysis of weathering rate of serpentine by microbial pure culture and field burial tests: A case study

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Weathering and soil production under trees growing on sandstones – The role of tree roots in soil formation

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2023.166343openalex-snapshot

Changes in the mycobiome structure in response to reduced nitrogen fertilization in two cropping systems of maize

inferred← citeshttps://doi.org/10.1016/j.scitotenv.2024.173725openalex-snapshot

High-resolution soil sampling reveals the pattern of biological weathering and soil formation under trees

inferred← citeshttps://doi.org/10.1016/j.still.2024.106180openalex-snapshot

Defoliation decreases soil aggregate stability by reducing plant carbon inputs and changing soil microbial communities

inferred← citeshttps://doi.org/10.3389/fmicb.2025.1517545openalex-snapshot

Size matters: larger fragments of riparian forest in urban areas support functional diversity of soil bacteria more than smaller ones

inferred← citeshttps://doi.org/10.3390/min13010012openalex-snapshot

Involvement of Soil Microorganisms in C, N and P Transformations and Phytotoxicity in Soil from Post-Industrial Areas Treated with Chemical Industry Waste

inferred← citeshttps://doi.org/10.3390/su17177853openalex-snapshot

Application of Machine Learning Approaches to Predict Soil Element Background Concentration at Large Region Scale

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