On the public citation graph

Linking phylogenetics with population genetics to reconstruct the geographic origin of a species

https://doi.org/10.1016/j.ympev.2004.03.013

0 signed · 121 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.

Claim with ORCID

Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.

See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferreduses_data →https://doi.org/10.5281/zenodo.10723540zenodo-depositor-declared

inferredcites →https://doi.org/10.1007/978-1-4613-0931-4_4openalex-snapshot

Historical Biogeography of the Drosophila melanogaster Species Subgroup

inferredcites →https://doi.org/10.1007/s002390010066openalex-snapshot

Comparative Genomics of Mitochondrial DNA in Members of the Drosophila melanogaster Subgroup

inferredcites →https://doi.org/10.1007/s002390010067openalex-snapshot

Comparative Genomics of Mitochondrial DNA in Drosophila simulans

inferredcites →https://doi.org/10.1016/0040-5809(75)90020-9openalex-snapshot

On the number of segregating sites in genetical models without recombination

inferredcites →https://doi.org/10.1016/s0169-5347(00)02025-5openalex-snapshot

Phylogenetic systematics turns over a new leaf

inferredcites →https://doi.org/10.1017/s0016672300023776openalex-snapshot

Estimating the recombination parameter of a finite population model without selection

inferredcites →https://doi.org/10.1017/s0016672308009610openalex-snapshot

Estimating the recombination parameter of a finite population model without selection

inferredcites →https://doi.org/10.1038/351652a0openalex-snapshot

Adaptive protein evolution at the Adh locus in Drosophila

inferredcites →https://doi.org/10.1038/365548a0openalex-snapshot

African and North American populations of Drosophila melanogaster are very different at the DNA level

inferredcites →https://doi.org/10.1038/380157a0openalex-snapshot

Rescue of hybrid sterility in crosses between D. melanogaster and D. simulans

inferredcites →https://doi.org/10.1073/pnas.76.10.5269openalex-snapshot

Mathematical model for studying genetic variation in terms of restriction endonucleases.

inferredcites →https://doi.org/10.1073/pnas.97.11.5960openalex-snapshot

Reduced X-linked nucleotide polymorphism in Drosophila simulans

inferredcites →https://doi.org/10.1080/106351502753475934openalex-snapshot

Geographic Origin of Human Mitochondrial DNA: Accommodating Phylogenetic Uncertainty and Model Comparison

inferredcites →https://doi.org/10.1093/bioinformatics/17.8.754openalex-snapshot

MRBAYES: Bayesian inference of phylogenetic trees

inferredcites →https://doi.org/10.1093/genetics/111.1.147openalex-snapshot

STATISTICAL PROPERTIES OF THE NUMBER OF RECOMBINATION EVENTS IN THE HISTORY OF A SAMPLE OF DNA SEQUENCES

inferredcites →https://doi.org/10.1093/genetics/123.3.585openalex-snapshot

Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.

inferredcites →https://doi.org/10.1093/genetics/133.2.375openalex-snapshot

DNA sequence variation at the period locus within and among species of the Drosophila melanogaster complex.

inferredcites →https://doi.org/10.1093/genetics/138.3.693openalex-snapshot

Molecular polymorphism in the period gene of Drosophila simulans.

inferredcites →https://doi.org/10.1093/genetics/144.3.1297openalex-snapshot

Molecular Evolution Between Drosophila melanogaster and D. simulans Reduced Codon Bias, Faster Rates of Amino Acid Substitution, and Larger Proteins in D. melanogaster

inferredcites →https://doi.org/10.1093/genetics/144.4.1519openalex-snapshot

Reduced Variation in Drosophila simulans Mitochondrial DNA

inferredcites →https://doi.org/10.1093/genetics/150.2.777openalex-snapshot

Genetic Variation and Differentiation at Microsatellite Loci in Drosophila simulans: Evidence for Founder Effects in New World Populations

inferredcites →https://doi.org/10.1093/genetics/152.2.763openalex-snapshot

Maximum-Likelihood Estimation of Migration Rates and Effective Population Numbers in Two Populations Using a Coalescent Approach

inferredcites →https://doi.org/10.1093/genetics/153.1.305openalex-snapshot

Population Structure Among African and Derived Populations of Drosophila simulans: Evidence for Ancient Subdivision and Recent Admixture

inferredcites →https://doi.org/10.1093/genetics/153.4.1709openalex-snapshot

Lack of Nucleotide Polymorphism in the Y-Linked Sperm Flagellar Dynein Gene Dhc-Yh3 of Drosophila melanogaster and D. simulans

inferredcites →https://doi.org/10.1093/genetics/154.4.1681openalex-snapshot

Molecular Variation at the In(2L)t Proximal Breakpoint Site in Natural Populations of Drosophila melanogaster and D. simulans

inferredcites →https://doi.org/10.1093/genetics/156.2.879openalex-snapshot

Consequences of Recombination on Traditional Phylogenetic Analysis

inferredcites →https://doi.org/10.1093/genetics/156.4.1879openalex-snapshot

Molecular Population Genetics of Male Accessory Gland Proteins in Drosophila

inferredcites →https://doi.org/10.1093/genetics/156.4.1913openalex-snapshot

The Population Genetics of the Origin and Divergence of the Drosophila simulans Complex Species

inferredcites →https://doi.org/10.1093/genetics/165.4.1959openalex-snapshot

Influence of Two Wolbachia Strains on Population Structure of East AfricanDrosophila simulans

inferredcites →https://doi.org/10.1093/molbev/msh028openalex-snapshot

Sequential Evolution of a Symbiont Inferred From the Host: Wolbachia and Drosophila simulans

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a003804openalex-snapshot

Contrasting Patterns of X-Linked and Autosomal Nucleotide Variation in Drosophila melanogaster and Drosophila simulans

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025760openalex-snapshot

A likelihood method for the detection of selection and recombination using nucleotide sequences

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025979openalex-snapshot

Nucleotide variation in the triosephosphate isomerase (Tpi) locus of Drosophila melanogaster and Drosophila simulans

inferredcites →https://doi.org/10.1093/sysbio/41.1.111openalex-snapshot

Geographic Origins of Human Mitochondrial DNA: Phylogenetic Evidence from Control Region Sequences

inferredcites →https://doi.org/10.1111/j.0014-3820.2001.tb00760.xopenalex-snapshot

PHYLOGEOGRAPHY AND HISTORICAL ECOLOGY OF THE NORTH ATLANTIC INTERTIDAL

inferredcites →https://doi.org/10.1111/j.0014-3820.2002.tb01364.xopenalex-snapshot

DIVERGENCE OF MITOCHONDRIAL DNA IS NOT CORROBORATED BY NUCLEAR DNA, MORPHOLOGY, OR BEHAVIOR IN DROSOPHILA SIMULANS

inferredcites →https://doi.org/10.1126/science.1840702openalex-snapshot

African Populations and the Evolution of Human Mitochondrial DNA

inferredcites →https://doi.org/10.1126/science.8073292openalex-snapshot

Genetics of a pheromonal difference contributing to reproductive isolation in Drosophila

inferredcites →https://doi.org/10.1146/annurev.ecolsys.28.1.437openalex-snapshot

Phylogeny Estimation and Hypothesis Testing Using Maximum Likelihood

inferredcites →https://doi.org/10.1201/b14835openalex-snapshot

Markov Chain Monte Carlo in Practice

inferredcites →https://doi.org/10.1201/b14835-15openalex-snapshot

Hypothesis testing and model selection

inferredcites →https://doi.org/10.1525/aa.1993.95.1.02a00030openalex-snapshot

The “Eve” Hypotheses: A Genetic Critique and Reanalysis

inferredcites →https://doi.org/10.1534/genetics.166.3.1357openalex-snapshot

Signature of Selective Sweep Associated With the Evolution of sex-ratio Drive in Drosophila simulans

inferredcites →https://doi.org/10.2307/1447682openalex-snapshot

Molecular Systematics

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1007/s10530-015-0911-6openalex-snapshot

Genetic population structure of the invasive ash dieback pathogen Hymenoscyphus fraxineus in its expanding range

inferred← citeshttps://doi.org/10.1007/s10658-019-01926-5openalex-snapshot

Phylogenetic and population genetic analyses reveal three distinct lineages of the invasive brown root-rot pathogen, Phellinus noxius, and bioclimatic modeling predicts differences in associated climate niches

inferred← citeshttps://doi.org/10.1007/s10709-009-9381-zopenalex-snapshot

High genetic differentiation between an African and a non-African strain of Drosophila simulans revealed by segregation distortion and reduced crossover frequency

inferred← citeshttps://doi.org/10.1007/s10709-011-9566-0openalex-snapshot

Population transcriptomics: insights from Drosophila simulans, Drosophila sechellia and their hybrids

inferred← citeshttps://doi.org/10.1007/s10750-009-9848-zopenalex-snapshot

Multiple in-to-Africa dispersals of labeonin fishes (Teleostei: Cyprinidae) revealed by molecular phylogenetic analysis

inferred← citeshttps://doi.org/10.1007/s40011-015-0647-1openalex-snapshot

Eggshells of Drosophila melanogaster and D. simulans: Ultrastructure, Measurement and Analyses

inferred← citeshttps://doi.org/10.1016/b978-0-12-372568-4.00012-4openalex-snapshot

Drive and sperm

inferred← citeshttps://doi.org/10.1016/j.actatropica.2008.10.013openalex-snapshot

Populations, hybrids and the systematic concepts of species and subspecies in Chagas disease triatomine vectors inferred from nuclear ribosomal and mitochondrial DNA

inferred← citeshttps://doi.org/10.1016/j.celrep.2026.117642openalex-snapshot

Comparative population genomics reveals adaptive convergence in two Drosophila species across global environments

inferred← citeshttps://doi.org/10.1016/j.ibmb.2006.11.002openalex-snapshot

Sympatric Drosophila simulans flies with distinct mtDNA show difference in mitochondrial respiration and electron transport

inferred← citeshttps://doi.org/10.1016/j.ibmb.2007.04.008openalex-snapshot

Sympatric Drosophila simulans flies with distinct mtDNA show age related differences in mitochondrial metabolism

inferred← citeshttps://doi.org/10.1016/j.jinsphys.2018.04.006openalex-snapshot

Redefining reproductive dormancy in Drosophila as a general stress response to cold temperatures

inferred← citeshttps://doi.org/10.1016/j.ympev.2005.02.016openalex-snapshot

High divergence among Drosophila simulans mitochondrial haplogroups arose in midst of long term purifying selection

inferred← citeshttps://doi.org/10.1016/j.ympev.2005.06.006openalex-snapshot

Historical biogeography of Drosophila simulans based on Y-chromosomal sequences

inferred← citeshttps://doi.org/10.1017/s0016672312000031openalex-snapshot

Abundant genetic variability in Drosophila simulans for hybrid female lethality in interspecific crosses to Drosophila melanogaster

inferred← citeshttps://doi.org/10.1038/hdy.2009.26openalex-snapshot

Introgression as a likely cause of mtDNA paraphyly in two allopatric skippers (Lepidoptera: Hesperiidae)

inferred← citeshttps://doi.org/10.1038/s41586-024-08056-xopenalex-snapshot

Circadian plasticity evolves through regulatory changes in a neuropeptide gene

inferred← citeshttps://doi.org/10.1073/pnas.0611479104openalex-snapshot

An Andean origin of Phytophthora infestans inferred from mitochondrial and nuclear gene genealogies

inferred← citeshttps://doi.org/10.1073/pnas.2419696122openalex-snapshot

Dinucleotide preferences underlie apparent codon preference reversals in the Drosophila melanogaster lineage

inferred← citeshttps://doi.org/10.1093/g3journal/jkac027openalex-snapshot

Pool-GWAS on reproductive dormancy in Drosophila simulans suggests a polygenic architecture

inferred← citeshttps://doi.org/10.1093/g3journal/jkae279openalex-snapshot

Two major-effect loci influence interspecific mating in females of the sibling species, Drosophila simulans and D. sechellia

inferred← citeshttps://doi.org/10.1093/gbe/evaf161openalex-snapshot

Phylogenetic Relatedness Does not Predict Patterns of Parallel Transcriptome Adaptation in Drosophila

inferred← citeshttps://doi.org/10.1093/gbe/evu198openalex-snapshot

Genome Diversity and Divergence in Drosophila mauritiana : Multiple Signatures of Faster X Evolution

inferred← citeshttps://doi.org/10.1093/gbe/evw291openalex-snapshot

Variation in the intensity of selection on codon bias over time causes contrasting patterns of base composition evolution in Drosophila

inferred← citeshttps://doi.org/10.1093/genetics/iyaf113openalex-snapshot

Adaptive gene expression parallelism in the male reproductive tract of two Drosophila species

inferred← citeshttps://doi.org/10.1093/genetics/iyag179openalex-snapshot

Parallel transcriptome adaptation during recent evolution of the Drosophila testis

inferred← citeshttps://doi.org/10.1093/molbev/msad152openalex-snapshot

The Evolutionary History of Drosophila simulans Y Chromosomes Reveals Molecular Signatures of Resistance to Sex Ratio Meiotic Drive

inferred← citeshttps://doi.org/10.1093/molbev/msl157openalex-snapshot

Pervasive Adaptive Evolution among Interactors of the Drosophila Hybrid Inviability Gene, Nup96

inferred← citeshttps://doi.org/10.1093/molbev/msn125openalex-snapshot

Positive and Negative Selection on Noncoding DNA in Drosophila simulans

inferred← citeshttps://doi.org/10.1093/molbev/msq280openalex-snapshot

Recent and Recurrent Selective Sweeps of the Antiviral RNAi Gene Argonaute-2 in Three Species of Drosophila

inferred← citeshttps://doi.org/10.1093/molbev/msr074openalex-snapshot

Rapid Rise and Fall of Selfish Sex-Ratio X Chromosomes in Drosophila simulans: Spatiotemporal Analysis of Phenotypic and Molecular Data

inferred← citeshttps://doi.org/10.1093/molbev/mst123openalex-snapshot

A Selective Sweep across Species Boundaries in Drosophila

inferred← citeshttps://doi.org/10.1093/molbev/msu246openalex-snapshot

Drosophila suzukii: The Genetic Footprint of a Recent, Worldwide Invasion

inferred← citeshttps://doi.org/10.1093/nar/gkz130openalex-snapshot

piRNA silencing contributes to interspecies hybrid sterility and reproductive isolation in Drosophila melanogaster

inferred← citeshttps://doi.org/10.1098/rsbl.2008.0174openalex-snapshot

Non-neutral processes drive the nucleotide composition of non-coding sequences in Drosophila

inferred← citeshttps://doi.org/10.1098/rspb.2005.3453openalex-snapshot

AWolbachia-associated fitness benefit depends on genetic background inDrosophila simulans

inferred← citeshttps://doi.org/10.1101/gr.130922.111openalex-snapshot

Genome sequencing reveals complex speciation in the Drosophila simulans clade

inferred← citeshttps://doi.org/10.1111/brv.12068openalex-snapshot

The relevance of time series in molecular ecology and conservation biology

inferred← citeshttps://doi.org/10.1111/evo.12146openalex-snapshot

PUPARIATION SITE PREFERENCE WITHIN AND BETWEENDROSOPHILASIBLING SPECIES

inferred← citeshttps://doi.org/10.1111/evo.13745openalex-snapshot

Loss of cytoplasmic incompatibility and minimal fecundity effects explain relatively low Wolbachia frequencies in Drosophila mauritiana

inferred← citeshttps://doi.org/10.1111/j.1365-2699.2005.01261.xopenalex-snapshot

Directional asymmetry of long‐distance dispersal and colonization could mislead reconstructions of biogeography

inferred← citeshttps://doi.org/10.1111/j.1365-294x.2006.03065.xopenalex-snapshot

Microsatellite variation and differentiation in African and non‐African populations of Drosophila simulans

inferred← citeshttps://doi.org/10.1111/j.1365-294x.2011.05127.xopenalex-snapshot

Inter-island divergence within Drosophila mauritiana, a species of the D. simulans complex: Past history and/or speciation in progress?

inferred← citeshttps://doi.org/10.1111/j.1420-9101.2007.01305.xopenalex-snapshot

A screen for immunity genes evolving under positive selection in Drosophila

inferred← citeshttps://doi.org/10.1111/j.1558-5646.2007.00133.xopenalex-snapshot

MITOCHONDRIAL DNA VARIATION IS ASSOCIATED WITH MEASURABLE DIFFERENCES IN LIFE-HISTORY TRAITS AND MITOCHONDRIAL METABOLISM IN DROSOPHILA SIMULANS

inferred← citeshttps://doi.org/10.1111/jeb.13141openalex-snapshot

The Drosophila simulans Y chromosome interacts with the autosomes to influence male fitness

inferred← citeshttps://doi.org/10.1111/mec.14145openalex-snapshot

Transcriptional polymorphism of pi RNA regulatory genes underlies the mariner activity in Drosophila simulans testes

inferred← citeshttps://doi.org/10.1146/annurev.ecolsys.36.091704.175513openalex-snapshot

The Population Biology of Mitochondrial DNA and Its Phylogenetic Implications

inferred← citeshttps://doi.org/10.1186/1471-2148-14-89openalex-snapshot

Distinguishing migration from isolation using genes with intragenic recombination: detecting introgression in the Drosophila simulans species complex

inferred← citeshttps://doi.org/10.1266/ggs.88.251openalex-snapshot

Enzymatic characterization of recombinant α-amylase in the Drosophila melanogaster species subgroup: is there an effect of specialization on digestive enzyme?

inferred← citeshttps://doi.org/10.1371/journal.pbio.0050310openalex-snapshot

Population Genomics: Whole-Genome Analysis of Polymorphism and Divergence in Drosophila simulans

inferred← citeshttps://doi.org/10.1371/journal.pgen.0020077openalex-snapshot

Origination of an X-Linked Testes Chimeric Gene by Illegitimate Recombination in Drosophila

inferred← citeshttps://doi.org/10.1371/journal.pgen.1005184openalex-snapshot

Parallel Gene Expression Differences between Low and High Latitude Populations of Drosophila melanogaster and D. simulans

inferred← citeshttps://doi.org/10.1371/journal.pgen.1007016openalex-snapshot

Genomics of parallel adaptation at two timescales in Drosophila

inferred← citeshttps://doi.org/10.1371/journal.pone.0026318openalex-snapshot

Genetic Diversity, Population Structure and Wolbachia Infection Status in a Worldwide Sample of Drosophila melanogaster and D. simulans Populations

inferred← citeshttps://doi.org/10.1371/journal.pone.0079750openalex-snapshot

Variation of Gene Expression Associated with Colonisation of an Anthropized Environment: Comparison between African and European Populations of Drosophila simulans

inferred← citeshttps://doi.org/10.1371/journal.pone.0085368openalex-snapshot

Population History and Pathways of Spread of the Plant Pathogen Phytophthora plurivora

inferred← citeshttps://doi.org/10.1534/genetics.105.046250openalex-snapshot

Contrasted Polymorphism Patterns in a Large Sample of Populations From the Evolutionary Genetics Model Drosophila simulans

inferred← citeshttps://doi.org/10.1534/genetics.106.058693openalex-snapshot

History and Structure of Sub-Saharan Populations ofDrosophila melanogaster

inferred← citeshttps://doi.org/10.1534/genetics.107.080200openalex-snapshot

AfricanDrosophila melanogasterandD. simulansPopulations Have Similar Levels of Sequence Variability, Suggesting Comparable Effective Population Sizes

inferred← citeshttps://doi.org/10.1534/genetics.107.084244openalex-snapshot

Positive Selection at the Binding Sites of the Male-Specific Lethal Complex Involved in Dosage Compensation in Drosophila

inferred← citeshttps://doi.org/10.1534/genetics.112.142018openalex-snapshot

Genomic Variation in Natural Populations ofDrosophila melanogaster

inferred← citeshttps://doi.org/10.1534/genetics.115.185496openalex-snapshot

Genomic Patterns of Geographic Differentiation in Drosophila simulans

inferred← citeshttps://doi.org/10.1534/genetics.119.302685openalex-snapshot

Rapid and Predictable Evolution of Admixed Populations Between Two Drosophila Species Pairs

inferred← citeshttps://doi.org/10.2737/pnw-gtr-1006openalex-snapshot

Brown root rot disease caused by Phellinus noxius in U.S.-Affiliated Pacific Islands

inferred← citeshttps://doi.org/10.64898/2026.02.23.707296openalex-snapshot

Molecular Basis of Behavioral Diversity in a Sibling Species Trio

inferred← citeshttps://doi.org/10.70675/6727fe09zf07cz42aez8b9cz96fd79157598openalex-snapshot

La régulation des éléments transposables par la voie des piARN : Les différences entre lignées germinales mâles et femelles et leurs conséquences sur la dynamique de transposition

inferred← citeshttps://doi.org/10.7287/peerj.9499v0.1/reviews/1openalex-snapshot

Peer Review #1 of "Light dependent courtship behavior in Drosophila simulans and D. melanogaster (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.9499v0.1/reviews/2openalex-snapshot

Peer Review #2 of "Light dependent courtship behavior in Drosophila simulans and D. melanogaster (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.9499v0.1/reviews/3openalex-snapshot

Peer Review #3 of "Light dependent courtship behavior in Drosophila simulans and D. melanogaster (v0.1)"

inferred← citeshttps://doi.org/10.7287/peerj.9499v0.2/reviews/1openalex-snapshot

Peer Review #1 of "Light dependent courtship behavior in Drosophila simulans and D. melanogaster (v0.2)"

inferred← citeshttps://doi.org/10.7287/peerj.9499v0.2/reviews/2openalex-snapshot

Peer Review #2 of "Light dependent courtship behavior in Drosophila simulans and D. melanogaster (v0.2)"

inferred← citeshttps://doi.org/10.7287/peerj.9499v0.2/reviews/3openalex-snapshot

Peer Review #3 of "Light dependent courtship behavior in Drosophila simulans and D. melanogaster (v0.2)"

inferred← citeshttps://doi.org/10.7287/peerj.9499v0.3/reviews/3openalex-snapshot

Peer Review #3 of "Light dependent courtship behavior in Drosophila simulans and D. melanogaster (v0.3)"

inferred← citeshttps://doi.org/10.7554/elife.35468openalex-snapshot

Gene flow mediates the role of sex chromosome meiotic drive during complex speciation

inferred← citeshttps://doi.org/10.7717/peerj.9499openalex-snapshot

Light dependent courtship behavior in Drosophila simulans and D. melanogaster

Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.