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Phylogeny and molecular evolution of the Drosophila hydei subgroup (Drosophila repleta group) inferred from the Xanthine dehydrogenase gene

https://doi.org/10.1016/j.ympev.2005.04.009

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferreduses_data →https://doi.org/10.5281/zenodo.10723540zenodo-depositor-declared

inferredcites →https://doi.org/10.1002/0471650129.dob0522openalex-snapshot

PAUP * [Phylogenetic Analysis Using Parsimony (and Other Methods)]

inferredcites →https://doi.org/10.1002/0471650129.dob0534openalex-snapshot

PHYLIP (Phylogeny Inference Package)

inferredcites →https://doi.org/10.1002/9780471650126.dob0534.pub2openalex-snapshot

PHYLIP ( PHYLogeny Inference Package)

inferredcites →https://doi.org/10.1006/mpev.1999.0631openalex-snapshot

Molecular Evolution and Phylogeny of the Drosophila saltans Species Group Inferred from the Xdh Gene

inferredcites →https://doi.org/10.1006/mpev.2000.0824openalex-snapshot

Phylogenetic Analysis of the repleta Species Group of the Genus Drosophila Using Multiple Sources of Characters

inferredcites →https://doi.org/10.1006/mpev.2001.1002openalex-snapshot

Phylogenetic Relationships among Species Groups of the virilis–repleta Radiation of Drosophila

inferredcites →https://doi.org/10.1007/978-1-4615-6977-0_3openalex-snapshot

Interspecific Hybridization in the Genus Drosophila

inferredcites →https://doi.org/10.1007/978-1-4615-7145-2_17openalex-snapshot

The Phylogeny, Ecology, and Geography of Drosophila

inferredcites →https://doi.org/10.1007/978-1-4757-0432-7openalex-snapshot

Ecological Genetics and Evolution

inferredcites →https://doi.org/10.1007/bf00175817openalex-snapshot

Molecular evolution of the hepatitis B virus genome

inferredcites →https://doi.org/10.1007/bf00178256openalex-snapshot

Estimating the pattern of nucleotide substitution

inferredcites →https://doi.org/10.1007/bf01731581openalex-snapshot

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

inferredcites →https://doi.org/10.1007/bf01734359openalex-snapshot

Evolutionary trees from DNA sequences: A maximum likelihood approach

inferredcites →https://doi.org/10.1007/bf02101694openalex-snapshot

Dating of the human-ape splitting by a molecular clock of mitochondrial DNA

inferredcites →https://doi.org/10.1007/bf02338836openalex-snapshot

Molecular systematics of theDrosophila hydei subgroup as inferred from mitochondrial DNA sequences

inferredcites →https://doi.org/10.1007/bf02352289openalex-snapshot

Maximum-likelihood models for combined analyses of multiple sequence data

inferredcites →https://doi.org/10.1016/0169-5347(96)10041-0openalex-snapshot

Among-site rate variation and its impact on phylogenetic analyses

inferredcites →https://doi.org/10.1016/b978-1-4832-3210-2.50006-6openalex-snapshot

Mammalian Protein Metabolism

inferredcites →https://doi.org/10.1016/b978-1-4832-3211-9.50009-7openalex-snapshot

Evolution of Protein Molecules

inferredcites →https://doi.org/10.1016/c2013-0-12458-0openalex-snapshot

Mammalian Protein Metabolism

inferredcites →https://doi.org/10.1046/j.1365-2540.2001.0923a.xopenalex-snapshot

Molecular Evolution and Phylogenetics

inferredcites →https://doi.org/10.1073/pnas.090541597openalex-snapshot

The phylogeny of closely related species as revealed by the genealogy of a speciation gene, Odysseus

inferredcites →https://doi.org/10.1073/pnas.83.22.8649openalex-snapshot

Evolution of mitochondrial DNA in Drosophila subobscura

inferredcites →https://doi.org/10.1073/pnas.95.4.1658openalex-snapshot

New Drosophila introns originate by duplication

inferredcites →https://doi.org/10.1086/284693openalex-snapshot

Evolutionary Analysis of Plant DNA Sequences

inferredcites →https://doi.org/10.1093/aibsbulletin/3.1.14-dopenalex-snapshot

Evolution in the Genus Drosophila

inferredcites →https://doi.org/10.1093/bioinformatics/13.5.555openalex-snapshot

PAML: a program package for phylogenetic analysis by maximum likelihood

inferredcites →https://doi.org/10.1093/genetics/143.1.537openalex-snapshot

Patterns of Nucleotide Substitution in Mitochondrial Protein Coding Genes of Vertebrates

inferredcites →https://doi.org/10.1093/genetics/144.3.1053openalex-snapshot

Synonymous Substitutions in the Xdh Gene of Drosophila: Heterogeneous Distribution Along the Coding Region

inferredcites →https://doi.org/10.1093/genetics/154.1.299openalex-snapshot

Genetic Architecture of a Morphological Shape Difference Between Two Drosophila Species

inferredcites →https://doi.org/10.1093/genetics/23.1.28openalex-snapshot

INVERSIONS IN THE CHROMOSOMES OF DROSOPHILA PSEUDOOBSCURA

inferredcites →https://doi.org/10.1093/nar/16.6.2736openalex-snapshot

Rapid isolation ofDrosophilahigh molecular weight DNA to obtain genomic libraries

inferredcites →https://doi.org/10.1093/oso/9780195135848.001.0001openalex-snapshot

Molecular Evolution and Phylogenetics

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a003932openalex-snapshot

Shared Nucleotide Composition Biases Among Species and Their Impact on Phylogenetic Reconstructions of the Drosophilidae

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025664openalex-snapshot

Quartet Puzzling: A Quartet Maximum-Likelihood Method for Reconstructing Tree Topologies

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025991openalex-snapshot

Inferring pattern and process: maximum-likelihood implementation of a nonhomogeneous model of DNA sequence evolution for phylogenetic analysis

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026392openalex-snapshot

Molecular Evolution and Phylogeny of the buzzatii Complex (Drosophila repleta Group): A Maximum-Likelihood Approach

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040023openalex-snapshot

Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees.

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040136openalex-snapshot

Recovering evolutionary trees under a more realistic model of sequence evolution.

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040182openalex-snapshot

Tests of applicability of several substitution models for DNA sequence data.

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040214openalex-snapshot

Molecular phylogeny and divergence times of drosophilid species.

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040259openalex-snapshot

Phylogenetic test of the molecular clock and linearized trees.

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040517openalex-snapshot

Relationships between gene trees and species trees.

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040529openalex-snapshot

Nucleotide sequence of the Xdh region in Drosophila pseudoobscura and an analysis of the evolution of synonymous codons.

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040708openalex-snapshot

Nucleotide polymorphism at the xanthine dehydrogenase locus in Drosophila pseudoobscura.

inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040752openalex-snapshot

Estimation of the number of nucleotide substitutions when there are strong transition-transversion and G+C-content biases.

inferredcites →https://doi.org/10.1111/j.1558-5646.1989.tb04220.xopenalex-snapshot

ANALYZING TABLES OF STATISTICAL TESTS

inferredcites →https://doi.org/10.1111/j.1558-5646.1993.tb02181.xopenalex-snapshot

REPRODUCTIVE RELATIONSHIPS AMONG TEN SPECIES OF THEDROSOPHILA REPLETAGROUP FROM SOUTH AMERICA AND THE WEST INDIES

inferredcites →https://doi.org/10.1111/j.1558-5646.1998.tb01827.xopenalex-snapshot

BEST‐FIT MAXIMUM‐LIKELIHOOD MODELS FOR PHYLOGENETIC INFERENCE: EMPIRICAL TESTS WITH KNOWN PHYLOGENIES

inferredcites →https://doi.org/10.1146/annurev.ecolsys.28.1.437openalex-snapshot

Phylogeny Estimation and Hypothesis Testing Using Maximum Likelihood

inferredcites →https://doi.org/10.14601/phytopathol_mediterr-14998u1.29openalex-snapshot

BIOEDIT: A USER-FRIENDLY BIOLOGICAL SEQUENCE ALIGNMENT EDITOR AND ANALYSIS PROGRAM FOR WINDOWS 95/98/ NT

inferredcites →https://doi.org/10.2307/2410173openalex-snapshot

Reproductive Relationships among Ten Species of the Drosophila repleta Group from South America and the West Indies

inferredcites →https://doi.org/10.2307/3215openalex-snapshot

Ecological Genetics and Evolution

inferredcites →https://doi.org/10.5281/zenodo.10764026openalex-snapshot

Drosophila guayllabambae n.sp., un nuevo miembro del grupo repleta, subgrupo hydei (Diptera, Drosophilidae).

inferredcites →https://doi.org/10.5281/zenodo.10764027openalex-snapshot

Subgrupo inca, un nuevo subgrupo del grupo repleta, con descripcion de Drosophila huancavilcae n.sp. (Diptera, Drosophilidae).

inferredcites →https://doi.org/10.5281/zenodo.10771994openalex-snapshot

A revision of the Drosophila repleta species group (Diptera, Drosophilidae).

inferredcites →https://doi.org/10.5281/zenodo.10772936openalex-snapshot

Taxonomic studies on the Drosophilidae.

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1002/ece3.11622openalex-snapshot

Species identification of livefood flightless fly ( Torinido‐shoujoubae ) through DNA barcoding

inferred← citeshttps://doi.org/10.1002/jez.b.21167openalex-snapshot

Adaptation to long sperm in Drosophila: correlated development of the sperm roller and sperm packaging

inferred← citeshttps://doi.org/10.1016/j.ympev.2006.12.021openalex-snapshot

On the phylogeny of the Drosophila hydei subgroup: New insights from combined analyses of nuclear and mitochondrial data

inferred← citeshttps://doi.org/10.1163/187631208788784237openalex-snapshot

A supertree analysis and literature review of the genus Drosophila and closely related genera (Diptera, Drosophilidae)

inferred← citeshttps://doi.org/10.1186/1471-2148-11-179openalex-snapshot

Variations on a theme: diversification of cuticular hydrocarbons in a clade of cactophilic Drosophila

inferred← citeshttps://doi.org/10.26807/remcb.v33i1-2.228openalex-snapshot

Cromosomas politénicos de Drosophila sp. nov. ¿Especie primitiva del grupo de Drosophila repleta?

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