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Life history and biogeographic diversification of an endemic western North American freshwater fish clade using a comparative species tree approach

https://doi.org/10.1016/j.ympev.2012.08.015

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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inferredcites →https://doi.org/10.1016/j.tree.2009.01.009openalex-snapshot

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inferredcites →https://doi.org/10.1016/j.ympev.2005.06.004openalex-snapshot

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inferredcites →https://doi.org/10.1016/j.ympev.2005.07.008openalex-snapshot

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inferredcites →https://doi.org/10.1016/j.ympev.2007.11.027openalex-snapshot

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inferredcites →https://doi.org/10.1016/j.ympev.2008.11.028openalex-snapshot

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inferredcites →https://doi.org/10.1016/s0169-5347(03)00184-8openalex-snapshot

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inferredcites →https://doi.org/10.1017/cbo9781139151948openalex-snapshot

Fauna Boreali-Americana; or, The Zoology of the Northern Parts of British America

inferredcites →https://doi.org/10.1038/nrg1961openalex-snapshot

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inferredcites →https://doi.org/10.1046/j.1365-294x.1999.00817.xopenalex-snapshot

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inferredcites →https://doi.org/10.1046/j.1365-294x.2002.01571.xopenalex-snapshot

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inferredcites →https://doi.org/10.1046/j.1471-8286.2003.00566.xopenalex-snapshot

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DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

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jModelTest: Phylogenetic Model Averaging

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inferredcites →https://doi.org/10.1111/j.1365-2699.2008.02032.xopenalex-snapshot

Phylogeography: retrospect and prospect

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inferredcites →https://doi.org/10.1111/j.1365-294x.2009.04380.xopenalex-snapshot

Mitochondrial DNA as a marker of molecular diversity: a reappraisal

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inferredcites →https://doi.org/10.1111/j.1558-5646.1990.tb03859.xopenalex-snapshot

SPECIATION AND ITS CONSEQUENCES

inferredcites →https://doi.org/10.1111/j.1558-5646.1995.tb02308.xopenalex-snapshot

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Operational Criteria for Delimiting Species

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INTRASPECIFIC PHYLOGEOGRAPHY: The Mitochondrial DNA Bridge Between Population Genetics and Systematics

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PhyloNet: a software package for analyzing and reconstructing reticulate evolutionary relationships

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BEAST: Bayesian evolutionary analysis by sampling trees

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Species Tree Inference by Minimizing Deep Coalescences

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The systematics of the prickly sculpin, cottus asper : an investigation of genetic and non-genetic variation within a polytypic species

inferredcites →https://doi.org/10.1577/1548-8659(1983)3<48:rofpit>2.0.co;2openalex-snapshot

Responses of Fish Populations in the North Fork of the Feather River, California, to Treatments with Fish Toxicants

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Molecular Systematics of the Polytypic Species Cottus hypselurus (Teleostei: Cottidae)

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Molecular Systematics of the Genus Cottus (Scorpaeniformes: Cottidae)

inferredcites →https://doi.org/10.2307/1219444openalex-snapshot

ECOLOGICAL SPECIES, MULTISPECIES, AND OAKS

inferredcites →https://doi.org/10.2307/1437500openalex-snapshot

Guide to the Fishes of the Great Lakes and Tributary Waters

inferredcites →https://doi.org/10.2307/1443695openalex-snapshot

Biology, Distribution and Status of Cottus asperrimus in the Pit River Drainage, Northeastern California

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Geographic Variation and a Taxonomic Reappraisal of the Marbled Sculpin, Cottus klamathensis

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inferredcites →https://doi.org/10.2307/1445804openalex-snapshot

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Complete Sequence of the Mitochondrial Cytochrome b Gene in the Cherryfin Shiner, Lythrurus roseipinnis (Teleostei: Cyprinidae)

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Modoc County: A Geographic Time Continuum on the California Volcanic Tableland

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Gene Flow Among Modoc Sucker and Sacramento Sucker Populations in the Upper Pit River, California and Oregon

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Animal Species and Evolution

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Researches upon the cyprinoid species inhabiting the fresh waters of the United States west of the Mississippi valley, from specimens in the museum of the Smithsonian Institution

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The Systematics of the Prickly Sculpin, Cottus asper Richardson, a Polytypic Species Part II. Studies on the Life History, with Especial Reference to Migration

inferredcites →https://doi.org/10.5281/zenodo.16692147openalex-snapshot

The Systematics of the Prickly Sculpin, Cottus asper Richardson, a Polytypic Species: Part I. Synonymy, Nomenclatural History, and Distribution

inferredcites →https://doi.org/10.5860/choice.37-5647openalex-snapshot

Phylogeography: the history and formation of species

inferredcites →https://doi.org/10.5962/bhl.title.63874openalex-snapshot

Fauna boreali-americana, or, The zoology of the northern parts of British America : containing descriptions of the objects of natural history collected on the late northern land expeditions under command of Captain Sir John Franklin, R.N

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.11646/zootaxa.5154.5.1zenodo-depositor-declared

Cryptic Species of Freshwater Sculpin (Cottidae: Cottus) in California, USA

inferred← citeshttps://doi.org/10.1002/9781119174844.biblioopenalex-snapshot

Bibliography

inferred← citeshttps://doi.org/10.1002/ajb2.1562openalex-snapshot

Two cryptic species of California mustard within Caulanthus lasiophyllus

inferred← citeshttps://doi.org/10.1002/ece3.10682openalex-snapshot

Phylogeography of a widespread Australian freshwater fish, western carp gudgeon (Eleotridae: Hypseleotris klunzingeri): Cryptic species, hybrid zones, and strong intra‐specific divergences

inferred← citeshttps://doi.org/10.1002/evl3.128openalex-snapshot

Developmental tuning of mineralization drives morphological diversity of gill cover bones in sculpins and their relatives

inferred← citeshttps://doi.org/10.1007/s10592-014-0574-3openalex-snapshot

Impact of dams on distribution, population structure, and hybridization of two species of California freshwater sculpin (Cottus)

inferred← citeshttps://doi.org/10.1007/s10592-016-0859-9openalex-snapshot

Evolution of rough sculpin (Cottus asperrimus) genetic divergence and late Quaternary displacement on the Hat Creek fault, California, USA

inferred← citeshttps://doi.org/10.1007/s10641-014-0262-7openalex-snapshot

Evolutionary diversification in freshwater sculpins (Cottoidea): a review of two major adaptive radiations

inferred← citeshttps://doi.org/10.1016/j.ympev.2014.02.021openalex-snapshot

The incidence of species-level paraphyly in animals: A re-assessment

inferred← citeshttps://doi.org/10.1093/biolinnean/blx035openalex-snapshot

Phylogeography of the mouth-brooding freshwater fish Glossamia aprion (Apogonidae) in northern and eastern Australia: historical biogeography and allopatric speciation

inferred← citeshttps://doi.org/10.1093/jhered/esw045openalex-snapshot

Novel Concordance Between Geographic, Environmental, and Genetic Structure in the Ecological Generalist Prickly Sculpin (Cottus asper) in California

inferred← citeshttps://doi.org/10.1111/jbi.14605openalex-snapshot

Uncovering the hidden biodiversity of streams at the upper distribution limit of fish

inferred← citeshttps://doi.org/10.1111/mec.12758openalex-snapshot

Complex phylogeography and historical hybridization between sister taxa of freshwater sculpin ( C ottus)

inferred← citeshttps://doi.org/10.1898/nwn16-23.1openalex-snapshot

Morphometric Analysis of Two Enigmatic Sculpin Species, Cottus gulosus and Cottus perplexus (Scorpaeniformes: Cottidae)

inferred← citeshttps://doi.org/10.3389/fbinf.2024.1433995openalex-snapshot

Time-calibrated phylogeny of neotropical freshwater fishes

inferred← citeshttps://doi.org/10.3398/064.082.0208openalex-snapshot

A Molecular Taxonomy of Cottus in western North America

inferred← citeshttps://doi.org/10.4137/ebo.s22340openalex-snapshot

MITOSCISSOR: A Useful Tool for Auto-Assembly of Mitogenomic Datasets in the Evolutionary Analysis of Fishes

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