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Quantitative Analysis of Isotope Distributions In Proteomic Mass Spectrometry Using Least-Squares Fourier Transform Convolution
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
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Proteome dynamics in complex organisms: Using stable isotopes to monitor individual protein turnover rates
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Implications of 15N‐metabolic labeling for automated peptide identification in Arabidopsis thaliana
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Relationship of Fourier transforms to isotope distribution calculations
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Numerical recipes in Fortran (The art of scientific computing)
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Measurement of protein turnover rates by heavy water labeling of nonessential amino acids
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A review of quantitative methods for proteomic studies
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Purifying protein complexes for mass spectrometry: applications to protein translation
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Global internal standard technology for comparative proteomics
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Automatic analysis of hydrogen/deuterium exchange mass spectra of peptides and proteins using calculations of isotopic distributions
inferredcites →https://doi.org/10.1021/ac00111a031openalex-snapshot
Rapid Calculation of Isotope Distributions
inferredcites →https://doi.org/10.1021/ac00253a037openalex-snapshot
Isotopic distributions in mass spectra of large molecules
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Proteolytic 18O Labeling for Comparative Proteomics: Model Studies with Two Serotypes of Adenovirus
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Measurement of the Isotope Enrichment of Stable Isotope-Labeled Proteins Using High-Resolution Mass Spectra of Peptides
inferredcites →https://doi.org/10.1021/ac070741jopenalex-snapshot
Proteomics in 2005/2006: Developments, Applications and Challenges
inferredcites →https://doi.org/10.1021/ac951158iopenalex-snapshot
Ultrahigh-Speed Calculation of Isotope Distributions
inferredcites →https://doi.org/10.1021/ja991063oopenalex-snapshot
High Throughput Proteome-Wide Precision Measurements of Protein Expression Using Mass Spectrometry
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Dissection of Proteolytic 18O Labeling: Endoprotease-Catalyzed 16O-to-18O Exchange of Truncated Peptide Substrates
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Perturbation and Interpretation of Nitrogen Isotope Distribution Patterns in Proteomics
inferredcites →https://doi.org/10.1038/13690openalex-snapshot
Quantitative analysis of complex protein mixtures using isotope-coded affinity tags
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An assembly landscape for the 30S ribosomal subunit
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Metabolic labeling of C. elegans and D. melanogaster for quantitative proteomics
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Multiplexed absolute quantification for proteomics using concatenated signature peptides encoded by QconCAT genes
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Functional and quantitative proteomics using SILAC
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Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS
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Accurate quantitation of protein expression and site-specific phosphorylation
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Stable Isotope Labeling by Amino Acids in Cell Culture, SILAC, as a Simple and Accurate Approach to Expression Proteomics
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The Subunit Structure and Dynamics of the 20S Proteasome in Chicken Skeletal Muscle
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Comparison of Full Versus Partial Metabolic Labeling for Quantitative Proteomics Analysis in Arabidopsis thaliana
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Absolute Multiplexed Quantitative Analysis of Protein Expression during Muscle Development Using QconCAT
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Metabolic Labeling of Proteins for Proteomics
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Automated extraction of backbone deuteration levels from amide H/2H mass spectrometry experiments
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Mechanism of Divergent Growth Factor Effects in Mesenchymal Stem Cell Differentiation
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An Algorithm for Least-Squares Estimation of Nonlinear Parameters
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Avian proteomics: advances, challenges and new technologies
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The Deuterator: software for the determination of backbone amide deuterium levels from H/D exchange MS data
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
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Detailed Study of Temperature-Related Alterations Throughout the Proteome of Arabidopsis thaliana Seedlings
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Current literature in mass spectrometry
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Current trends in quantitative proteomics
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Advances in protein turnover analysis at the global level and biological insights
inferred← citeshttps://doi.org/10.1002/rcm.8460openalex-snapshot
Resolution of protein hydrogen/deuterium exchange by fitting amide exchange probabilities to the peptide isotopic envelopes
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Mass Spectrometry-Based Methods for Characterization of Hypomodifications in Transfer RNA
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Modular Assembly of the Bacterial Large Ribosomal Subunit
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Quantitative Proteomic Analysis of Ribosome Assembly and Turnover In Vivo
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Systematic Chromosomal Deletion of Bacterial Ribosomal Protein Genes
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SrmB Rescues Trapped Ribosome Assembly Intermediates
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Stable isotope pulse-chase monitored by quantitative mass spectrometry applied to E. coli 30S ribosome assembly kinetics
inferred← citeshttps://doi.org/10.1021/ac101039xopenalex-snapshot
Computation of the Isotopic Distribution in Two Dimensions
inferred← citeshttps://doi.org/10.1021/ac8020505openalex-snapshot
Quantitative ESI-TOF Analysis of Macromolecular Assembly Kinetics
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Quantitation of the Ribosomal Protein Autoregulatory Network Using Mass Spectrometry
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IsoSpec2: Ultrafast Fine Structure Calculator
inferred← citeshttps://doi.org/10.1021/acs.jproteome.6c00685openalex-snapshot
Evaluating a Lightweight Neural Network for Aggregate Isotope Distribution Prediction
inferred← citeshttps://doi.org/10.1021/acs.jproteome.7b00807openalex-snapshot
Poisson Model To Generate Isotope Distribution for Biomolecules
inferred← citeshttps://doi.org/10.1021/ja412084bopenalex-snapshot
Quantitative Analysis of rRNA Modifications Using Stable Isotope Labeling and Mass Spectrometry
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Orthogonal Comparison of Analytical Methods by Theoretical Reconstruction from Bottom-up Assay Data
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Determination of 15N-Incorporation into Plant Proteins and their Absolute Quantitation: A New Tool to Study Nitrogen Flux Dynamics and Protein Pool Sizes Elicited by Plant–Herbivore Interactions
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Degradation Rate of Mitochondrial Proteins in Arabidopsis thaliana Cells
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Non-canonical resource allocation in heterotrophically growing Thermoanaerobacter kivui
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inferred← citeshttps://doi.org/10.1073/pnas.0912007107openalex-snapshot
Kinetic cooperativity in Escherichia coli 30S ribosomal subunit reconstitution reveals additional complexity in the assembly landscape
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Complete list of canonical post-transcriptional modifications in the Bacillus subtilis ribosome and their link to RbgA driven large subunit assembly
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Proteomic Dynamics and Heat Stress Response in Arabidopsis Seedlings
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Functional Interaction between Ribosomal Protein L6 and RbgA during Ribosome Assembly
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Proteome Dynamics of Arabidopsis thaliana Under Moderate Heat Stress
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inferred← citeshttps://doi.org/10.31219/osf.io/jv3taopenalex-snapshot
Unraveling Proteome Dynamics in Arabidopsis thaliana Seed-lings Under Moderate Heat Stress
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A combined quantitative mass spectrometry and electron microscopy analysis of ribosomal 30S subunit assembly in E. coli
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