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In Situ Capture and Real-Time Enrichment of Marine Chemical Diversity

https://doi.org/10.1021/acscentsci.3c00661

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Secondary Metabolome Variability and Inducible Chemical Defenses in the Mediterranean Sponge Aplysina cavernicola

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Metabolomics on the study of marine organisms

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In situ isolation of allelochemicals released from soft corals (Coelenterata : Octocorallia): A totally submersible sampling apparatus

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Human impacts on deep-sea sponge grounds: Applying environmental omics to monitoring

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Non-targeted tandem mass spectrometry enables the visualization of organic matter chemotype shifts in coastal seawater

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Anthropogenic pollution of aquatic ecosystems: Emerging problems with global implications

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Environmental monitoring approaches for the detection of organic contaminants in marine environments: A critical review

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Fifty years of solid-phase extraction in water analysis – historical development and overview

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S-(+)-methyl ester of hanishin from the marine sponge Agelas ceylonica

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NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products

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Feature-Based Molecular Networking Discovery of Bromopyrrole Alkaloids from the Marine Sponge Agelas dispar

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Spongian Diterpenes Including One with a Rearranged Skeleton from the Marine Sponge Spongia officinalis

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Bromopyrrole Alkaloids of the Sponge Agelas oroides Collected Near the Israeli Mediterranean Coastline

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Climate Change Could Alter Undersea Chemical Communication

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Diving into the Molecular Diversity of Aplysina cavernicola’s Exometabolites: Contribution of Bromo-Spiroisoxazoline Alkaloids

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Identifying Small Molecules via High Resolution Mass Spectrometry: Communicating Confidence

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Effects on biological evolution of changes in ocean chemistry

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Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

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Small molecule in situ resin capture provides a compound first approach to natural product discovery

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Systematic classification of unknown metabolites using high-resolution fragmentation mass spectra

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Integrative analysis of multimodal mass spectrometry data in MZmine 3

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SIRIUS 4: a rapid tool for turning tandem mass spectra into metabolite structure information

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Feature-based molecular networking in the GNPS analysis environment

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Spherulization as a process for the exudation of chemical cues by the encrusting sponge C. crambe

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Marine chemical ecology in benthic environments

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Marine chemical ecology in benthic environments

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Unlocking the potential of marine biodiscovery

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The isolation of water-soluble natural products – challenges, strategies and perspectives

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Marine natural products

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Searching molecular structure databases with tandem mass spectra using CSI:FingerID

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Distinguishing the molecular diversity, nutrient content, and energetic potential of exometabolomes produced by macroalgae and reef-building corals

inferredcites →https://doi.org/10.1080/14786419.2017.1285298openalex-snapshot

Metabolomics approach to chemical diversity of the Mediterranean marine sponge Agelas oroides

inferredcites →https://doi.org/10.1101/2023.03.02.530684openalex-snapshot

Small Molecule in situ Resin Capture – A Compound First Approach to Natural Product Discovery

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Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks

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Mediterranean marine keystone species on the brink of extinction

inferredcites →https://doi.org/10.1128/aem.02830-18openalex-snapshot

Detection of Natural Products and Their Producers in Ocean Sediments

inferredcites →https://doi.org/10.1146/annurev.marine.010908.163708openalex-snapshot

Marine Chemical Ecology: Chemical Signals and Cues Structure Marine Populations, Communities, and Ecosystems

inferredcites →https://doi.org/10.1146/annurev.marine.010908.163817openalex-snapshot

Marine Chemical Technology and Sensors for Marine Waters: Potentials and Limits

inferredcites →https://doi.org/10.1186/1471-2105-11-395openalex-snapshot

MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data

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MetFrag relaunched: incorporating strategies beyond in silico fragmentation

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Patterns of Chemical Diversity in the Mediterranean Sponge Spongia lamella

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Biochemical Trade-Offs: Evidence for Ecologically Linked Secondary Metabolism of the Sponge Oscarella balibaloi

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Advances in Marine Biology

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High-Resolution Liquid Chromatography Tandem Mass Spectrometry Enables Large Scale Molecular Characterization of Dissolved Organic Matter

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Application of in situ Solid-Phase Microextraction on Mediterranean Sponges for Untargeted Exometabolome Screening and Environmental Monitoring

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Molecular Commerce on Coral Reefs: Using Metabolomics to Reveal Biochemical Exchanges Underlying Holobiont Biology and the Ecology of Coastal Ecosystems

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Mass Spectrometry-Based Metabolomics to Elucidate Functions in Marine Organisms and Ecosystems

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Marine Sponge Derived Natural Products between 2001 and 2010: Trends and Opportunities for Discovery of Bioactives

inferredcites →https://doi.org/10.3390/md14010001openalex-snapshot

Aeroplysinin-1, a Sponge-Derived Multi-Targeted Bioactive Marine Drug

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Innovative Approach to Sustainable Marine Invertebrate Chemistry and a Scale-Up Technology for Open Marine Ecosystems

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ConCISE: Consensus Annotation Propagation of Ion Features in Untargeted Tandem Mass Spectrometry Combining Molecular Networking and In Silico Metabolite Structure Prediction

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Furanoterpene Diversity and Variability in the Marine Sponge Spongia officinalis, from Untargeted LC–MS/MS Metabolomic Profiling to Furanolactam Derivatives

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A Review of In Situ Methods—Solid Phase Adsorption Toxin Tracking (SPATT) and Polar Organic Chemical Integrative Sampler (POCIS) for the Collection and Concentration of Marine Biotoxins and Pharmaceuticals in Environmental Waters

inferredcites →https://doi.org/10.4319/lom.2008.6.230openalex-snapshot

A simple and efficient method for the solid‐phase extraction of dissolved organic matter (SPE‐DOM) from seawater

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← backgroundhttps://doi.org/10.5281/zenodo.7820941zenodo-depositor-declared

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Benthic contributions to the chemical seascape: Insights from Mediterranean underwater caves

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Small molecule in situ resin capture provides a compound first approach to natural product discovery

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Ecological context for bacterial natural products discovery

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Practical guide for marine exo-metabolomic sample preparation

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Uncovering the Structural Space of Marine Dissolved Organic Matter

inferred← citeshttps://doi.org/10.1146/annurev-micro-040824-022431openalex-snapshot

Roles of Marine Microbial Natural Products

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Circadian migrations of cave-dwelling crustaceans guided by their home chemical seascape

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Advanced Technologies for Large Scale Supply of Marine Drugs

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Chemical and microbial mediators as key structuring elements for coralrecruitment

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Chemical and microbial effects of macroalgae on coral holobionts and reef ecosystems

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