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Comparing the polarities of the amino acids: side-chain distribution coefficients between the vapor phase, cyclohexane, 1-octanol, and neutral aqueous solution

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Une nouvelle méthode de synthèse peptidique
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Hydroxyindole-O-Mthyltransferase III: Influence of the Phenyl Moiety on the Inhibitory Activities of Some N-Acyltryptamines
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�ber das Wasserstoffbindungsverm�gen von S�uren
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Verteilung aliphatischer Amine zwischen Wasser und Mischungen von organischen L�sungsmitteln
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Distribution of carboxylic acids between organic solvents and aqueous perchloric acid solution
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The interpretation of protein structures: Estimation of static accessibility
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Amino acid side-chain partition energies and distribution of residues in soluble proteins
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Internal cavities and buried waters in globular proteins
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Affinities of amino acid side chains for solvent water
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Effects of Solutes on the Strength of Hydrophobic Interaction and Its Temperature Dependence
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A Study of Solutions of Methyl Alcohol in Cyclohexane, in Water and in Cyclohexane and Water
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Influence of Water on Protein Structure. An Analysis of the Preferences of Amino Acid Residues for the Inside or Outside and for Specific Conformations in a Protein Molecule
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Surface and inside volumes in globular proteins
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Hydrophobicity of Amino Acid Residues in Globular Proteins

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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inferred← citeshttps://doi.org/10.1007/s10822-016-0002-5openalex-snapshot
The influence of hydrogen bonding on partition coefficients
inferred← citeshttps://doi.org/10.1007/s10822-016-9947-7openalex-snapshot
SAMPL5: 3D-RISM partition coefficient calculations with partial molar volume corrections and solute conformational sampling
inferred← citeshttps://doi.org/10.1007/s10822-016-9958-4openalex-snapshot
Prediction of cyclohexane-water distribution coefficient for SAMPL5 drug-like compounds with the QMPFF3 and ARROW polarizable force fields
inferred← citeshttps://doi.org/10.1007/s10822-024-00579-9openalex-snapshot
Understanding the relationship between preferential interactions of peptides in water-acetonitrile mixtures with protein-solvent contact surface area
inferred← citeshttps://doi.org/10.1007/s10847-008-9464-yopenalex-snapshot
Scope of amino acid recognition by cucurbit[8]uril
inferred← citeshttps://doi.org/10.1007/s10953-018-0787-zopenalex-snapshot
Determinations of Dipole Moments for Liquid–Liquid Extraction Reagents
inferred← citeshttps://doi.org/10.1007/s10973-007-8698-zopenalex-snapshot
Is there a relationship between protein thermal stability and the denaturation heat capacity change?
inferred← citeshttps://doi.org/10.1007/s12539-012-0120-2openalex-snapshot
Electrostatic potential studies as a consequence of cation-π interaction in cytochrome c fold of alpha proteins
inferred← citeshttps://doi.org/10.1016/0003-2697(91)90045-uopenalex-snapshot
Development of hydrophobicity parameters to analyze proteins which bear post- or cotranslational modifications
inferred← citeshttps://doi.org/10.1016/0014-5793(95)00961-8openalex-snapshot
The difference in affinity between two fungal cellulose‐binding domains is dominated by a single amino acid substitution
inferred← citeshttps://doi.org/10.1016/0022-2836(91)80195-zopenalex-snapshot
In a staphylococcal nuclease mutant the side-chain of a lysine replacing valine 66 is fully buried in the hydrophobic core
inferred← citeshttps://doi.org/10.1016/0022-2836(92)90121-yopenalex-snapshot
Contribution of the hydrophobic effect to globular protein stability
inferred← citeshttps://doi.org/10.1016/0022-2836(92)90895-qopenalex-snapshot
Prediction of the activity and stability effects of site-directed mutagenesis on a protein core
inferred← citeshttps://doi.org/10.1016/0040-4020(94)00935-nopenalex-snapshot
Chiral lipophilic ligands. 2. Cu(II)-Mediated transport of α-amino acids across a bulk chloroform membrane
inferred← citeshttps://doi.org/10.1016/0040-6031(89)87028-5openalex-snapshot
Calorimetric measurement of the enthalpy of dissolution of diketopiperazine in water as a function of temperature
inferred← citeshttps://doi.org/10.1016/0045-2068(91)90031-jopenalex-snapshot
Relative free energies of solvation of PO, PN, and PC derivatives related to phosphoramide inhibitors of metallopeptidases
inferred← citeshttps://doi.org/10.1016/0076-6879(91)02030-dopenalex-snapshot
[28] Mutational remodeling of enzyme specificity
inferred← citeshttps://doi.org/10.1016/0076-6879(94)28064-9openalex-snapshot
[62] Uses of fusions of β-galactosidase and peptides to proteins
inferred← citeshttps://doi.org/10.1016/0079-6107(93)90017-eopenalex-snapshot
Aspects of protein energetics and dynamics
inferred← citeshttps://doi.org/10.1016/0141-0229(91)90129-xopenalex-snapshot
Partitioning of β-galactosidase fusion proteins in PEG/potassium phosphate aqueous two-phase systems
inferred← citeshttps://doi.org/10.1016/0166-1280(94)80065-0openalex-snapshot
Molecular associations from ab initio pair potentials
inferred← citeshttps://doi.org/10.1016/0166-1280(94)80066-9openalex-snapshot
Molecular associations from ab initio pair potentials
inferred← citeshttps://doi.org/10.1016/0167-7322(94)00658-xopenalex-snapshot
Theoretical study on the water structure of the aqueous amino acid solutions using Monte Carlo method.
inferred← citeshttps://doi.org/10.1016/0167-7799(91)90130-aopenalex-snapshot
The molecular basis of partitioning in aqueous two-phase systems
inferred← citeshttps://doi.org/10.1016/0167-7799(91)90190-sopenalex-snapshot
Repacking protein interiors
inferred← citeshttps://doi.org/10.1016/0301-4622(94)00046-8openalex-snapshot
The hydration and solvent polarization effects of nucleotide bases
inferred← citeshttps://doi.org/10.1016/0959-440x(91)90057-zopenalex-snapshot
The hydrophobic effect
inferred← citeshttps://doi.org/10.1016/0960-894x(96)00069-8openalex-snapshot
Benzenesulfonamide-peptide conjugates as probes for secondary binding sites near the active site of carbonic anhydrase
inferred← citeshttps://doi.org/10.1016/b978-0-12-058757-5.50066-4openalex-snapshot
Thermodynamics of Side Chain Internal Rotations – Effects on Protein Structure and Stability
inferred← citeshttps://doi.org/10.1016/b978-012492543-4/50005-2openalex-snapshot
Amino Acids, Peptides, and Proteins
inferred← citeshttps://doi.org/10.1016/b978-012492543-4/50030-1openalex-snapshot
Organization, Replication, Transposition, and Repair of DNA
inferred← citeshttps://doi.org/10.1016/j.abb.2007.07.007openalex-snapshot
Minimizing frustration by folding in an aqueous environment
inferred← citeshttps://doi.org/10.1016/j.actbio.2016.11.061openalex-snapshot
Design and surface immobilization of short anti-biofilm peptides
inferred← citeshttps://doi.org/10.1016/j.bbabio.2006.06.005openalex-snapshot
Factors influencing the energetics of electron and proton transfers in proteins. What can be learned from calculations
inferred← citeshttps://doi.org/10.1016/j.bbagen.2018.06.011openalex-snapshot
Joker: An algorithm to insert patterns into sequences for designing antimicrobial peptides
inferred← citeshttps://doi.org/10.1016/j.bbagen.2021.130070openalex-snapshot
Sense the moment: A highly sensitive antimicrobial activity predictor based on hydrophobic moment
inferred← citeshttps://doi.org/10.1016/j.bbamem.2005.07.001openalex-snapshot
Membrane association and activity of 15/16-membered peptide antibiotics: Zervamicin IIB, ampullosporin A and antiamoebin I
inferred← citeshttps://doi.org/10.1016/j.bbamem.2006.11.016openalex-snapshot
Effects of topology, length, and charge on the activity of a kininogen-derived peptide on lipid membranes and bacteria
inferred← citeshttps://doi.org/10.1016/j.bbamem.2008.06.014openalex-snapshot
Partitioning of amino-acid analogues in a five-slab membrane model
inferred← citeshttps://doi.org/10.1016/j.bbamem.2011.01.004openalex-snapshot
Helical integrity and microsolvation of transmembrane domains from Flaviviridae envelope glycoproteins
inferred← citeshttps://doi.org/10.1016/j.bbamem.2012.09.009openalex-snapshot
The role of tryptophan side chains in membrane protein anchoring and hydrophobic mismatch
inferred← citeshttps://doi.org/10.1016/j.bbamem.2014.01.015openalex-snapshot
Implicit membrane treatment of buried charged groups: Application to peptide translocation across lipid bilayers
inferred← citeshttps://doi.org/10.1016/j.bbamem.2014.04.014openalex-snapshot
Membrane-active peptides: Binding, translocation, and flux in lipid vesicles
inferred← citeshttps://doi.org/10.1016/j.bbamem.2016.02.027openalex-snapshot
Atomic-level description of protein–lipid interactions using an accelerated membrane model
inferred← citeshttps://doi.org/10.1016/j.bbamem.2018.09.012openalex-snapshot
The importance of the membrane interface as the reference state for membrane protein stability
inferred← citeshttps://doi.org/10.1016/j.bbapap.2006.04.012openalex-snapshot
Aminotryptophan-containing barstar: Structure–function tradeoff in protein design and engineering with an expanded genetic code
inferred← citeshttps://doi.org/10.1016/j.bbrep.2016.09.009openalex-snapshot
Vibrio cholerae hemolysin: The β-trefoil domain is required for folding to the native conformation
inferred← citeshttps://doi.org/10.1016/j.bej.2009.05.005openalex-snapshot
Driving forces of protein partitioning in an ionic liquid-based aqueous two-phase system
inferred← citeshttps://doi.org/10.1016/j.biosystems.2019.103979openalex-snapshot
Experimental solutions to problems defining the origin of codon-directed protein synthesis
inferred← citeshttps://doi.org/10.1016/j.bpc.2006.02.005openalex-snapshot
Voltage-dependent energetics of alamethicin monomers in the membrane
inferred← citeshttps://doi.org/10.1016/j.bpj.2009.07.064openalex-snapshot
Tyrosine Autofluorescence as a Measure of Bovine Insulin Fibrillation
inferred← citeshttps://doi.org/10.1016/j.bpj.2010.08.002openalex-snapshot
The Energetics of Transmembrane Helix Insertion into a Lipid Bilayer
inferred← citeshttps://doi.org/10.1016/j.bpj.2012.01.021openalex-snapshot
Determination of Membrane-Insertion Free Energies by Molecular Dynamics Simulations
inferred← citeshttps://doi.org/10.1016/j.bpj.2014.08.026openalex-snapshot
Thermodynamics of Antimicrobial Lipopeptide Binding to Membranes: Origins of Affinity and Selectivity
inferred← citeshttps://doi.org/10.1016/j.bpj.2016.06.006openalex-snapshot
The Conformation of Interfacially Adsorbed Ranaspumin-2 Is an Arrested State on the Unfolding Pathway
inferred← citeshttps://doi.org/10.1016/j.bpj.2019.05.024openalex-snapshot
Hydrophobic Characteristic Is Energetically Preferred for Cysteine in a Model Membrane Protein
inferred← citeshttps://doi.org/10.1016/j.bpj.2020.03.006openalex-snapshot
Protein Structure Prediction and Design in a Biologically Realistic Implicit Membrane
inferred← citeshttps://doi.org/10.1016/j.cartre.2022.100215openalex-snapshot
Water to cyclohexane transfer free energy calculations for a carbon nanotube
inferred← citeshttps://doi.org/10.1016/j.cbi.2010.07.013openalex-snapshot
Influence of the microenvironment of thiol groups in low molecular mass thiols and serum albumin on the reaction with methylglyoxal
inferred← citeshttps://doi.org/10.1016/j.cbpc.2004.01.007openalex-snapshot
Unusually weak oxygen binding, physical properties, partial sequence, autoxidation rate and a potential phosphorylation site of beluga whale (Delphinapterus leucas) myoglobin
inferred← citeshttps://doi.org/10.1016/j.cell.2010.07.013openalex-snapshot
A Shaker K+ Channel with a Miniature Engineered Voltage Sensor
inferred← citeshttps://doi.org/10.1016/j.ces.2005.04.009openalex-snapshot
Advances in protein structure prediction and de novo protein design: A review
inferred← citeshttps://doi.org/10.1016/j.chemphys.2009.01.012openalex-snapshot
Self assembly of peptides near or within membranes using coarse grained MD simulations
inferred← citeshttps://doi.org/10.1016/j.chroma.2005.12.101openalex-snapshot
The synergistic effect between hydrophobic and electrostatic interactions in the uptake of amino acids by strongly acidic cation-exchange resins
inferred← citeshttps://doi.org/10.1016/j.chroma.2011.10.003openalex-snapshot
Effect of anionic structure on the phase formation and hydrophobicity of amino acid ionic liquids aqueous two-phase systems
inferred← citeshttps://doi.org/10.1016/j.compbiolchem.2011.03.002openalex-snapshot
Statistical analysis and exposure status classification of transmembrane beta barrel residues
inferred← citeshttps://doi.org/10.1016/j.comptc.2014.02.014openalex-snapshot
An ab initio analysis of the structure of l-tryptophan tautomers in microhydrated environments, in water and in hydrophobic solvents
inferred← citeshttps://doi.org/10.1016/j.cplett.2014.08.073openalex-snapshot
Solvation free energies in [bmim]-based ionic liquids: Anion effect toward solvation of amino acid side chain analogues
inferred← citeshttps://doi.org/10.1016/j.cplett.2020.137918openalex-snapshot
WITHDRAWN: Solvent-excluded volume effect explains why N-methylacetamide is a solvent better than water for amino acid side chains
inferred← citeshttps://doi.org/10.1016/j.cplett.2020.138160openalex-snapshot
N-methylacetamide is a solvent better than water for amino acid side chains: A rationalization grounded in the solvent-excluded volume effect
inferred← citeshttps://doi.org/10.1016/j.febslet.2014.05.006openalex-snapshot
Forces stabilizing proteins
inferred← citeshttps://doi.org/10.1016/j.fluid.2020.112789openalex-snapshot
Liquid-liquid equilibria of aqueous biphasic systems containing 1-alkyl-3-methylimidazolium amino acid ionic liquids with different anions (L-Leucine, L-Valine, L-Lysine) and inorganic salt (tripotassium phosphate, potassium carbonate)
inferred← citeshttps://doi.org/10.1016/j.foodchem.2016.05.100openalex-snapshot
New antimicrobial peptides against foodborne pathogens: From in silico design to experimental evidence
inferred← citeshttps://doi.org/10.1016/j.foodres.2011.07.010openalex-snapshot
Effects of engineered methionine in the 8Sα globulin of mungbean on its physicochemical and functional properties and potential nutritional quality
inferred← citeshttps://doi.org/10.1016/j.ijantimicag.2011.12.003openalex-snapshot
YADAMP: yet another database of antimicrobial peptides
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2007.05.004openalex-snapshot
Exploration of the polar microenvironment around the reactive cysteine in rabbit muscle creatine kinase
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