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Thermodynamic Parameters for an Expanded Nearest-Neighbor Model for Formation of RNA Duplexes with Watson−Crick Base Pairs
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Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/(sici)1097-0282(1997)44:3<309::aid-bip8>3.0.co;2-zopenalex-snapshot
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inferredcites →https://doi.org/10.1002/(sici)1097-0282(199712)42:7<783::aid-bip4>3.0.co;2-popenalex-snapshot
Derivation of nearest-neighbor properties from data on nucleic acid oligomers. I. Simple sets of independent sequences and the influence of absent nearest neighbors
inferredcites →https://doi.org/10.1002/(sici)1097-0282(199712)42:7<795::aid-bip5>3.0.co;2-oopenalex-snapshot
Derivation of nearest-neighbor properties from data on nucleic acid oligomers. II. Thermodynamic parameters of DNA · RNA hybrids and DNA duplexes
inferredcites →https://doi.org/10.1002/bip.1970.360090207openalex-snapshot
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inferredcites →https://doi.org/10.1002/bip.1981.360201204openalex-snapshot
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inferredcites →https://doi.org/10.1002/bip.360321210openalex-snapshot
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inferredcites →https://doi.org/10.1006/jmbi.1994.1493openalex-snapshot
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inferredcites →https://doi.org/10.1016/0022-2836(66)90116-1openalex-snapshot
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inferredcites →https://doi.org/10.1016/0022-2836(73)90096-xopenalex-snapshot
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inferredcites →https://doi.org/10.1016/0022-2836(74)90357-xopenalex-snapshot
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inferredcites →https://doi.org/10.1016/0022-2836(85)90077-4openalex-snapshot
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inferredcites →https://doi.org/10.1016/0022-2836(90)90386-zopenalex-snapshot
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inferredcites →https://doi.org/10.1016/0040-4020(84)85098-xopenalex-snapshot
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inferredcites →https://doi.org/10.1016/0065-227x(83)90007-2openalex-snapshot
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inferredcites →https://doi.org/10.1016/0076-6879(95)59047-1openalex-snapshot
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inferredcites →https://doi.org/10.1016/0370-1573(85)90060-2openalex-snapshot
Thermal denaturation of DNA molecules: A comparison of theory with experiment
inferredcites →https://doi.org/10.1016/s0022-2836(65)80080-8openalex-snapshot
Absorption and Optical Rotatory Dispersion of Seven Trinucleoside Diphosphates
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Deoxynucleoside phosphoramidites—A new class of key intermediates for deoxypolynucleotide synthesis
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inferredcites →https://doi.org/10.1021/bi00010a009openalex-snapshot
A Periodic Table of Tandem Mismatches in RNA
inferredcites →https://doi.org/10.1021/bi00012a031openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00035a029openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00044a016openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00108a002openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00108a005openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00110a015openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00203a033openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00208a024openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00210a009openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00240a013openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00250a040openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00271a004openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00295a025openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00329a042openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00359a020openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00367a061openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00372a009openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00417a029openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00432a013openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00436a025openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00453a038openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi00509a001openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi951907qopenalex-snapshot
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inferredcites →https://doi.org/10.1021/bi9610820openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi9615710openalex-snapshot
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inferredcites →https://doi.org/10.1021/bi962590copenalex-snapshot
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inferredcites →https://doi.org/10.1021/bi9625915openalex-snapshot
Solution Structure of (rGGCAGGCC)2 by Two-Dimensional NMR and the Iterative Relaxation Matrix Approach,
inferredcites →https://doi.org/10.1021/bi962608jopenalex-snapshot
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inferredcites →https://doi.org/10.1021/bi970122copenalex-snapshot
Investigation of the Structural Basis for Thermodynamic Stabilities of Tandem GU Wobble Pairs: NMR Structures of (rGGAGUUCC)2 and (rGGAUGUCC)2,
inferredcites →https://doi.org/10.1021/bi971069vopenalex-snapshot
Thermodynamics of Nonsymmetric Tandem Mismatches Adjacent to G·C Base Pairs in RNA
inferredcites →https://doi.org/10.1021/bk-1998-0682openalex-snapshot
Molecular Modeling of Nucleic Acids
inferredcites →https://doi.org/10.1021/ed055p489openalex-snapshot
Statistical effects and the evaluation of entropy differences in equilibrium processes. Symmetry corrections and entropy of mixing
inferredcites →https://doi.org/10.1021/j100562a006openalex-snapshot
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inferredcites →https://doi.org/10.1021/ja00011a039openalex-snapshot
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inferredcites →https://doi.org/10.1021/ja00018a047openalex-snapshot
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inferredcites →https://doi.org/10.1021/ja00246a047openalex-snapshot
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inferredcites →https://doi.org/10.1038/350628a0openalex-snapshot
Ribozyme recognition of RNA by tertiary interactions with specific ribose 2′-OH groups
inferredcites →https://doi.org/10.1063/1.3061541openalex-snapshot
An Introduction to Scientific Research
inferredcites →https://doi.org/10.1063/1.4823194openalex-snapshot
Data Reduction and Error Analysis for the Physical Sciences
inferredcites →https://doi.org/10.1073/pnas.83.24.9373openalex-snapshot
Improved free-energy parameters for predictions of RNA duplex stability.
inferredcites →https://doi.org/10.1073/pnas.86.20.7766openalex-snapshot
Monte Carlo description of oligoelectrolyte properties of DNA oligomers: range of the end effect and the approach of molecular and thermodynamic properties to the polyelectrolyte limits.
inferredcites →https://doi.org/10.1073/pnas.91.20.9218openalex-snapshot
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inferredcites →https://doi.org/10.1073/pnas.95.4.1460openalex-snapshot
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inferredcites →https://doi.org/10.1074/jbc.270.15.8439openalex-snapshot
Optical Melting of 128 Octamer DNA Duplexes
inferredcites →https://doi.org/10.1080/07328318808056329openalex-snapshot
Evaluation of the Use of the t-Butyldimethylsilyl Group for 2′-Protection in RNA-Synthesis Via the H-Phosphonate Approach
inferredcites →https://doi.org/10.1080/07391102.1984.10507514openalex-snapshot
Thermodynamic Studies of RNA Stability
inferredcites →https://doi.org/10.1080/07391102.1984.10507552openalex-snapshot
Allowance for Heterogeneous Stacking in the DNA Helix-Coil Transition Theory
inferredcites →https://doi.org/10.1080/15257779408012153openalex-snapshot
Application of the Thermodynamic Parameters of DNA Stability Prediction to Double-Helix Formation of Deoxyribooligonucleotides
inferredcites →https://doi.org/10.1093/nar/13.13.4811openalex-snapshot
Base-base mismatches. Thermodynamics of double helix formation for dCA3XA3G + dCT3YT3G (X, Y = A,C,G,D
inferredcites →https://doi.org/10.1093/nar/13.24.8927openalex-snapshot
Base pairing involving deoxyinosine: implications for probe design
inferredcites →https://doi.org/10.1093/nar/14.19.7727openalex-snapshot
Studies on nucleic acid interactions I. Stabilities of mini-duplexes (dG2A4XA4G2.dC2T4YT4C2) and self-complementary d(GGGAAXYTTCCC) containing deoxyinosine and other mismatched bases
inferredcites →https://doi.org/10.1093/nar/22.14.2760openalex-snapshot
Thermal denaturation of double-stranded nucleic acids: prediction of temperatures critical for gradient gel electrophoresis and polymerase chain reaction
inferredcites →https://doi.org/10.1093/nar/23.14.2677openalex-snapshot
Synthesis, deprotection, analysis and purification of RNA and ribosomes
inferredcites →https://doi.org/10.1093/nar/9.1.133openalex-snapshot
Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information
inferredcites →https://doi.org/10.1093/protein/3.1.1openalex-snapshot
The price of lost freedom: entropy of bimolecular complex formation
inferredcites →https://doi.org/10.1119/1.17439openalex-snapshot
Data Reduction and Error Analysis for the Physical Sciences, 2nd ed.
inferredcites →https://doi.org/10.1126/science.2468181openalex-snapshot
On Finding All Suboptimal Foldings of an RNA Molecule
inferredcites →https://doi.org/10.1146/annurev.bb.17.060188.001123openalex-snapshot
RNA Structure Prediction
inferredcites →https://doi.org/10.1146/annurev.physchem.53.082001.144341openalex-snapshot
PHYSICAL CHEMISTRY OF NUCLEIC ACIDS
inferredcites →https://doi.org/10.3109/10409238009105432openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/(sici)1097-0282(1999)52:1<29::aid-bip2>3.0.co;2-kopenalex-snapshot
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inferred← citeshttps://doi.org/10.1002/0471250953.bi1204s46openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/0471250953.bi1206s46openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/1097-0282(1999)52:4<157::aid-bip1001>3.0.co;2-eopenalex-snapshot
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inferred← citeshttps://doi.org/10.1006/jmbi.2000.3894openalex-snapshot
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inferred← citeshttps://doi.org/10.1006/jmbi.2000.3953openalex-snapshot
A role for upstream RNA structure in facilitating the catalytic fold of the genomic hepatitis delta virus ribozyme 1 1Edited by J. A. Doudna
inferred← citeshttps://doi.org/10.1006/jmbi.2000.4172openalex-snapshot
A story: unpaired adenosine bases in ribosomal RNAs
inferred← citeshttps://doi.org/10.1006/jmbi.2000.4360openalex-snapshot
Water and ion binding around r(UpA)12and d(TpA)12Oligomers - comparison with RNA and DNA (CpG)12 duplexes
inferred← citeshttps://doi.org/10.1006/jmbi.2001.4751openalex-snapshot
Probing the folding landscape of the Tetrahymena ribozyme: commitment to form the native conformation is late in the folding pathway
inferred← citeshttps://doi.org/10.1006/jmbi.2001.5351openalex-snapshot
Dynalign: an algorithm for finding the secondary structure common to two RNA sequences
inferred← citeshttps://doi.org/10.1007/978-0-8176-4789-6_17openalex-snapshot
Graph Representations and Algorithms in Computational Biology of RNA Secondary Structure
inferred← citeshttps://doi.org/10.1007/978-1-0716-1298-9_2openalex-snapshot
Selection of Chemical Modifications in the siRNA Seed Region That Repress Off-Target Effect
inferred← citeshttps://doi.org/10.1007/978-1-0716-1822-6_1openalex-snapshot
Methods for the Development of Recombinant Microorganisms for the Production of Natural Products
inferred← citeshttps://doi.org/10.1007/978-1-0716-2421-0_15openalex-snapshot
RNA Structure Prediction, Analysis, and Design: An Introduction to Web-Based Tools
inferred← citeshttps://doi.org/10.1007/978-1-0716-2768-6_4openalex-snapshot
Nucleic Acid Structure Prediction Including Pseudoknots Through Direct Enumeration of States: A User’s Guide to the LandscapeFold Algorithm
inferred← citeshttps://doi.org/10.1007/978-1-0716-2768-6_6openalex-snapshot
RNA Secondary Structure Prediction Based on Energy Models
inferred← citeshttps://doi.org/10.1007/978-1-0716-3519-3_1openalex-snapshot
Estimating RNA Secondary Structure Folding Free Energy Changes with efn2
inferred← citeshttps://doi.org/10.1007/978-1-0716-3519-3_2openalex-snapshot
VarGibbs Usage in the Optimization of Nearest-Neighbor Parameters and Prediction of Melting Temperature of RNA Duplexes
inferred← citeshttps://doi.org/10.1007/978-1-0716-3519-3_9openalex-snapshot
How to do RNA-RNA Interaction Prediction? A Use-Case Driven Handbook Using IntaRNA
inferred← citeshttps://doi.org/10.1007/978-1-0716-4079-1_2openalex-snapshot
Sequence Design Using RNAstructure
inferred← citeshttps://doi.org/10.1007/978-1-4939-0835-6_5openalex-snapshot
Methods of Identification of Pseudogenes Based on Functionality: Hybridization of 18S rRNA and mRNA During Translation
inferred← citeshttps://doi.org/10.1007/978-1-4939-1369-5_14openalex-snapshot
On Using Magnesium and Potassium Ions in RNA Experiments
inferred← citeshttps://doi.org/10.1007/978-1-4939-2291-8_2openalex-snapshot
RNA Secondary Structure Prediction from Multi-Aligned Sequences
inferred← citeshttps://doi.org/10.1007/978-1-4939-6433-8_11openalex-snapshot
RNA Secondary Structure Determination by NMR
inferred← citeshttps://doi.org/10.1007/978-1-4939-6433-8_2openalex-snapshot
Secondary Structure Prediction of Single Sequences Using RNAstructure
inferred← citeshttps://doi.org/10.1007/978-1-4939-6433-8_4openalex-snapshot
Predicting RNA–RNA Interactions Using RNAstructure
inferred← citeshttps://doi.org/10.1007/978-1-59745-528-2_2openalex-snapshot
OLIGO 7 Primer Analysis Software
inferred← citeshttps://doi.org/10.1007/978-1-60761-657-3_8openalex-snapshot
Using OligoWalk to Identify Efficient siRNA Sequences
inferred← citeshttps://doi.org/10.1007/978-1-61779-806-1_4openalex-snapshot
Spectroscopic Probes of RNA Structure and Dynamics
inferred← citeshttps://doi.org/10.1007/978-1-61779-949-5_14openalex-snapshot
Computational Identification of sRNA Targets
inferred← citeshttps://doi.org/10.1007/978-1-62703-709-9_3openalex-snapshot
The Determination of RNA Folding Nearest Neighbor Parameters
inferred← citeshttps://doi.org/10.1007/978-1-84996-196-7_2openalex-snapshot
RNA Secondary Structure Prediction and Gene Regulation by Small RNAs
inferred← citeshttps://doi.org/10.1007/978-3-030-06128-9_6openalex-snapshot
Roots of Complexity in the Self-referential Genetic Code
inferred← citeshttps://doi.org/10.1007/978-3-030-37853-0_1openalex-snapshot
Folding Words Around Trees: Models Inspired by RNA
inferred← citeshttps://doi.org/10.1007/978-3-031-36390-0_4openalex-snapshot
Unraveling RNA by Mechanical Unzipping
inferred← citeshttps://doi.org/10.1007/978-3-031-36390-0_7openalex-snapshot
Probing the RNA Structure-Dependent RNA Regulations and Functions
inferred← citeshttps://doi.org/10.1007/978-3-031-36390-0_8openalex-snapshot
Probing Techniques of Secondary and Tertiary RNA Structure and a Case Study for RNA G-Quadruplexes
inferred← citeshttps://doi.org/10.1007/978-3-540-24628-2_16openalex-snapshot
Nearest-Neighbor Thermodynamics of DNA Sequences with Single Bulge Loop
inferred← citeshttps://doi.org/10.1007/978-3-642-25740-7_3openalex-snapshot
Methods for Predicting RNA Secondary Structure
inferred← citeshttps://doi.org/10.1007/978-3-642-25740-7_4openalex-snapshot
Why Can’t We Predict RNA Structure At Atomic Resolution?
inferred← citeshttps://doi.org/10.1007/978-3-642-25740-7_6openalex-snapshot
The RNA Folding Problems: Different Levels of sRNA Structure Prediction
inferred← citeshttps://doi.org/10.1007/978-3-642-37195-0_22openalex-snapshot
Abstract: Using the Fast Fourier Transform to Accelerate the Computational Search for RNA Conformational Switches
inferred← citeshttps://doi.org/10.1007/978-3-662-48221-6_20openalex-snapshot
A Sparsified Four-Russian Algorithm for RNA Folding
inferred← citeshttps://doi.org/10.1007/978-94-017-9245-5_11openalex-snapshot
RNA Folding: Structure Prediction, Folding Kinetics and Ion Electrostatics
inferred← citeshttps://doi.org/10.1007/978-981-10-8219-1_12openalex-snapshot
Functional Nucleic Acid Based Biosensors for MicroRNA Detection
inferred← citeshttps://doi.org/10.1007/978-981-10-8219-1_13openalex-snapshot
Functional Nucleic Acid Based Biosensors for CircRNA Detection
inferred← citeshttps://doi.org/10.1007/978-981-13-1912-9_11openalex-snapshot
Effects of 2′-O-Modifications on RNA Duplex Stability
inferred← citeshttps://doi.org/10.1007/978-981-16-1313-5_2-1openalex-snapshot
Stability Prediction of Canonical and Noncanonical Structures of Nucleic Acids
inferred← citeshttps://doi.org/10.1007/978-981-19-9776-1_2openalex-snapshot
Stability Prediction of Canonical and Noncanonical Structures of Nucleic Acids
inferred← citeshttps://doi.org/10.1007/978-981-95-2525-6_32openalex-snapshot
Nucleic Acid Structure Prediction
inferred← citeshttps://doi.org/10.1007/s00214-005-0027-7openalex-snapshot
Predicting RNA secondary structure by free energy minimization
inferred← citeshttps://doi.org/10.1007/s00216-010-3896-0openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/s00239-006-0218-4openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/s00285-006-0379-1openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/s00285-007-0129-zopenalex-snapshot
Boltzmann ensemble features of RNA secondary structures: a comparative analysis of biological RNA sequences and random shuffles
inferred← citeshttps://doi.org/10.1007/s00285-007-0130-6openalex-snapshot
Introduction to special issue on RNA
inferred← citeshttps://doi.org/10.1007/s00285-007-0137-zopenalex-snapshot
Efficient sampling of RNA secondary structures from the Boltzmann ensemble of low-energy
inferred← citeshttps://doi.org/10.1007/s00285-011-0467-8openalex-snapshot
Expected distance between terminal nucleotides of RNA secondary structures
inferred← citeshttps://doi.org/10.1007/s00285-012-0631-9openalex-snapshot
Combinatorics of locally optimal RNA secondary structures
inferred← citeshttps://doi.org/10.1007/s00285-014-0760-4openalex-snapshot
RNA folding pathways and kinetics using 2D energy landscapes
inferred← citeshttps://doi.org/10.1007/s00432-023-04910-zopenalex-snapshot
Turning off a few overexpressed genes in prostate cancer with microRNAs using a 7mer-seed match model
inferred← citeshttps://doi.org/10.1007/s00706-008-0895-3openalex-snapshot
Beyond energy minimization: approaches to the kinetic folding of RNA
inferred← citeshttps://doi.org/10.1007/s00894-012-1385-4openalex-snapshot
Role of wobble base pair geometry for codon degeneracy: purine-type bases at the anticodon wobble position
inferred← citeshttps://doi.org/10.1007/s00894-017-3480-zopenalex-snapshot
Effect of single-residue bulges on RNA double-helical structures: crystallographic database analysis and molecular dynamics simulation studies
inferred← citeshttps://doi.org/10.1007/s10441-019-09356-wopenalex-snapshot
The Uroboros Theory of Life’s Origin: 22-Nucleotide Theoretical Minimal RNA Rings Reflect Evolution of Genetic Code and tRNA-rRNA Translation Machineries
inferred← citeshttps://doi.org/10.1007/s10489-018-1281-4openalex-snapshot
Chemical reaction optimization for RNA structure prediction
inferred← citeshttps://doi.org/10.1007/s10709-011-9621-xopenalex-snapshot
Evaluation of the internal transcribed spacer 2 (ITS2) as a molecular marker for phylogenetic inference using sequence and secondary structure information in blow flies (Diptera: Calliphoridae)
inferred← citeshttps://doi.org/10.1007/s10858-012-9603-zopenalex-snapshot
RNA-PAIRS: RNA probabilistic assignment of imino resonance shifts
inferred← citeshttps://doi.org/10.1007/s11010-012-1238-6openalex-snapshot
siRNAs target sites selection of ezrin and the influence of RNA interference on ezrin expression and biological characters of osteosarcoma cells
inferred← citeshttps://doi.org/10.1007/s11084-006-9041-6openalex-snapshot
The Evolution of the Genetic Code Revisited
inferred← citeshttps://doi.org/10.1007/s11084-006-9042-5openalex-snapshot
Primordia Vita. Deconvolution from Modern Sequences.
inferred← citeshttps://doi.org/10.1007/s11427-019-1658-xopenalex-snapshot
Epitranscriptomic technologies and analyses
inferred← citeshttps://doi.org/10.1007/s11515-008-0032-zopenalex-snapshot
Predicting siRNA activity based on back-propagation neural network
inferred← citeshttps://doi.org/10.1007/s11538-013-9899-1openalex-snapshot
Asymptotic Number of Hairpins of Saturated RNA Secondary Structures
inferred← citeshttps://doi.org/10.1007/s11859-013-0905-0openalex-snapshot
Molecular dynamics simulation of RNA pseudoknot unfolding pathway
inferred← citeshttps://doi.org/10.1007/s11859-015-1115-8openalex-snapshot
Folding kinetics of HDV ribozyme with C13A:G82U and A16U:U79A mutations
inferred← citeshttps://doi.org/10.1007/s11859-018-1292-3openalex-snapshot
Folding behaviors of purine riboswitch aptamers
inferred← citeshttps://doi.org/10.1007/s12035-016-9940-0openalex-snapshot
Amikacin Inhibits miR-497 Maturation and Exerts Post-ischemic Neuroprotection
inferred← citeshttps://doi.org/10.1007/s12064-011-0139-7openalex-snapshot
Evaluation of a sophisticated SCFG design for RNA secondary structure prediction
inferred← citeshttps://doi.org/10.1007/s12257-021-0354-0openalex-snapshot
Ribosome-binding Sequences (RBS) Engineering of Key Genes in Escherichia coli for High Production of Fatty Alcohols
inferred← citeshttps://doi.org/10.1007/s12559-011-9116-1openalex-snapshot
Mutuality in Discrete and Compositional Information: Perspectives for Synthetic Genetic Codes
inferred← citeshttps://doi.org/10.1007/s13277-011-0183-4openalex-snapshot
Ezrin mRNA target site selection for DNAzymes using secondary structure and hybridization thermodynamics
inferred← citeshttps://doi.org/10.1007/s13365-025-01268-5openalex-snapshot
Designing a cellular MicroRNA-based approach to silence bat-borne Nipah virus genes
inferred← citeshttps://doi.org/10.1007/s40484-017-0093-6openalex-snapshot
Comparative and integrative analysis of RNA structural profiling data: current practices and emerging questions
inferred← citeshttps://doi.org/10.1007/s40860-019-00091-0openalex-snapshot
Nature inspired optimization algorithm for prediction of “minimum free energy” “RNA secondary structure”
inferred← citeshttps://doi.org/10.1016/b978-0-12-385120-8.00002-4openalex-snapshot
The Ribosome Binding Site Calculator
inferred← citeshttps://doi.org/10.1016/b978-0-12-420037-1.00001-4openalex-snapshot
Computational Prediction of RNA Secondary Structure
inferred← citeshttps://doi.org/10.1016/b978-0-12-800046-5.00008-4openalex-snapshot
Noncanonical Structures and Their Thermodynamics of DNA and RNA Under Molecular Crowding
inferred← citeshttps://doi.org/10.1016/b978-0-12-801238-3.08997-2openalex-snapshot
Polymerase Chain Reaction (PCR)
inferred← citeshttps://doi.org/10.1016/b978-0-323-99507-8.00005-6openalex-snapshot
RNA secondary structure prediction: a practical guide
inferred← citeshttps://doi.org/10.1016/b978-008043408-7/50023-xopenalex-snapshot
Thermodynamics of RNA Secondary Structure Formation
inferred← citeshttps://doi.org/10.1016/b978-008043408-7/50025-3openalex-snapshot
RNA Conformational Dynamics
inferred← citeshttps://doi.org/10.1016/b978-008044396-6/50010-1openalex-snapshot
Genetic Code: a Self-Referential and Functional Model
inferred← citeshttps://doi.org/10.1016/b978-008045382-8.00689-4openalex-snapshot
Recent Progress on Understanding Ribosomal Protein Synthesis
inferred← citeshttps://doi.org/10.1016/bs.mie.2014.10.053openalex-snapshot
Improving RNA Secondary Structure Prediction with Structure Mapping Data
inferred← citeshttps://doi.org/10.1016/bs.mie.2015.07.029openalex-snapshot
The Complementarity of the Loop to the Stem in DNA Pseudoknots Gives Rise to Local TAT Base-Triplets
inferred← citeshttps://doi.org/10.1016/j.ab.2015.08.021openalex-snapshot
iRNA-Methyl: Identifying N6-methyladenosine sites using pseudo nucleotide composition
inferred← citeshttps://doi.org/10.1016/j.abb.2005.12.009openalex-snapshot
Restoration of native folding of single-stranded DNA sequences through reverse mutations: An indication of a new epigenetic mechanism
inferred← citeshttps://doi.org/10.1016/j.aca.2014.03.020openalex-snapshot
Self-assembling protein platform for direct quantification of circulating microRNAs in serum with total internal reflection fluorescence microscopy
inferred← citeshttps://doi.org/10.1016/j.alcohol.2008.12.007openalex-snapshot
RNA interference against aldehyde dehydrogenase-2: development of tools for alcohol research
inferred← citeshttps://doi.org/10.1016/j.antiviral.2024.105946openalex-snapshot
Targeting sgRNA N secondary structure as a way of inhibiting SARS-CoV-2 replication
inferred← citeshttps://doi.org/10.1016/j.asoc.2020.106848openalex-snapshot
An efficient three-Level parallel ABC algorithm for secondary structure prediction of complex RNA sequences
inferred← citeshttps://doi.org/10.1016/j.bbagrm.2019.04.007openalex-snapshot
Computational approaches for the discovery of splicing regulatory RNA structures
inferred← citeshttps://doi.org/10.1016/j.bbrc.2004.06.116openalex-snapshot
A comparison of siRNA efficacy predictors
inferred← citeshttps://doi.org/10.1016/j.bbrc.2010.11.114openalex-snapshot
Development of a software tool and criteria evaluation for efficient design of small interfering RNA
inferred← citeshttps://doi.org/10.1016/j.bbrc.2017.01.014openalex-snapshot
On the conformational stability of the smallest RNA kissing complexes maintained through two G·C base pairs
inferred← citeshttps://doi.org/10.1016/j.bbrc.2019.02.073openalex-snapshot
Dynamic stacking of an expected branch point adenosine in duplexes containing pseudouridine-modified or unmodified U2 snRNA sites
inferred← citeshttps://doi.org/10.1016/j.biochi.2020.10.005openalex-snapshot
In silico molecular docking in DNA aptamer development
inferred← citeshttps://doi.org/10.1016/j.bios.2006.09.002openalex-snapshot
Application of a unique server-based oligonucleotide probe selection tool toward a novel biosensor for the detection of Streptococcus pyogenes
inferred← citeshttps://doi.org/10.1016/j.biosystems.2005.11.003openalex-snapshot
Mutation model for nucleotide sequences based on crystal basis
inferred← citeshttps://doi.org/10.1016/j.biosystems.2011.02.006openalex-snapshot
Design of interacting multi-stable nucleic acids for molecular information processing
inferred← citeshttps://doi.org/10.1016/j.biosystems.2023.105034openalex-snapshot
How ambiguity codes specify molecular descriptors and information flow in Code Biology
inferred← citeshttps://doi.org/10.1016/j.bmcl.2015.10.024openalex-snapshot
Watson–Crick hydrogen bonding of unlocked nucleic acids
inferred← citeshttps://doi.org/10.1016/j.bpc.2007.09.007openalex-snapshot
Thermodynamic dependence of DNA/DNA and DNA/RNA hybridization reactions on temperature and ionic strength
inferred← citeshttps://doi.org/10.1016/j.bpc.2011.06.006openalex-snapshot
Melting behavior and ligand binding of DNA intramolecular secondary structures
inferred← citeshttps://doi.org/10.1016/j.bpc.2015.01.001openalex-snapshot
Cy3 and Cy5 dyes attached to oligonucleotide terminus stabilize DNA duplexes: Predictive thermodynamic model
inferred← citeshttps://doi.org/10.1016/j.bpc.2017.07.001openalex-snapshot
Thermodynamics and kinetics of RNA tertiary structure formation in the junctionless hairpin ribozyme
inferred← citeshttps://doi.org/10.1016/j.bpc.2017.08.007openalex-snapshot
Mesoscopic modelling of Cy3 and Cy5 dyes attached to DNA duplexes
inferred← citeshttps://doi.org/10.1016/j.bpc.2018.12.006openalex-snapshot
Contribution of 3′T and 3′TT overhangs to the thermodynamic stability of model siRNA duplexes
inferred← citeshttps://doi.org/10.1016/j.bpc.2021.106551openalex-snapshot
Salt dependent mesoscopic model for RNA at multiple strand concentrations
inferred← citeshttps://doi.org/10.1016/j.bpc.2022.106763openalex-snapshot
pH dependence of C•A, G•A and A•A mismatches in the stem of precursor microRNA-31
inferred← citeshttps://doi.org/10.1016/j.bpj.2011.04.038openalex-snapshot
Theory for RNA Folding, Stretching, and Melting Including Loops and Salt
inferred← citeshttps://doi.org/10.1016/j.bpj.2011.12.052openalex-snapshot
Thermodynamic and Kinetic Analysis of an RNA Kissing Interaction and Its Resolution into an Extended Duplex
inferred← citeshttps://doi.org/10.1016/j.bpj.2012.06.048openalex-snapshot
Ion-Mediated RNA Structural Collapse: Effect of Spatial Confinement
inferred← citeshttps://doi.org/10.1016/j.bpj.2015.01.023openalex-snapshot
Modelling Toehold-Mediated RNA Strand Displacement
inferred← citeshttps://doi.org/10.1016/j.bpj.2015.11.006openalex-snapshot
Predicting 3D Structure, Flexibility, and Stability of RNA Hairpins in Monovalent and Divalent Ion Solutions
inferred← citeshttps://doi.org/10.1016/j.bpj.2017.06.024openalex-snapshot
Investigation of the Melting Behavior of DNA Three-Way Junctions in the Closed and Open States
inferred← citeshttps://doi.org/10.1016/j.bpj.2018.08.030openalex-snapshot
Modeling Structure, Stability, and Flexibility of Double-Stranded RNAs in Salt Solutions
inferred← citeshttps://doi.org/10.1016/j.bpj.2019.06.037openalex-snapshot
A Polymer Physics Framework for the Entropy of Arbitrary Pseudoknots
inferred← citeshttps://doi.org/10.1016/j.bpj.2019.07.003openalex-snapshot
Overstretching Double-Stranded RNA, Double-Stranded DNA, and RNA-DNA Duplexes
inferred← citeshttps://doi.org/10.1016/j.bpj.2020.07.042openalex-snapshot
Modeling Loop Composition and Ion Concentration Effects in RNA Hairpin Folding Stability
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