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Cheminformatics Analysis of Organic Substituents: Identification of the Most Common Substituents, Calculation of Substituent Properties, and Automatic Identification of Drug-like Bioisosteric Groups

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Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/qsar.19890080207openalex-snapshot
Comparison of Fragment Weighting Schemes for Substructural Analysis
inferredcites →https://doi.org/10.1002/qsar.19970160505openalex-snapshot
Simple Quantum Chemical Parameters as an Alternative to the Hammett Sigma Constants in QSAR Studies
inferredcites →https://doi.org/10.1016/s0166-1280(97)00179-6openalex-snapshot
WWW-based chemical information system
inferredcites →https://doi.org/10.1016/s1093-3263(98)00012-6openalex-snapshot
World Wide Web-based system for the calculation of substituent parameters and substituent similarity searches
inferredcites →https://doi.org/10.1021/ci00063a006openalex-snapshot
Atomic physicochemical parameters for three dimensional structure directed quantitative structure-activity relationships. 4. Additional parameters for hydrophobic and dispersive interactions and their application for an automated superposition of certain naturally occurring nucleoside antibiotics
inferredcites →https://doi.org/10.1021/ci00063a007openalex-snapshot
Review of ring perception algorithms for chemical graphs
inferredcites →https://doi.org/10.1021/ci970429iopenalex-snapshot
RECAPRetrosynthetic Combinatorial Analysis Procedure: A Powerful New Technique for Identifying Privileged Molecular Fragments with Useful Applications in Combinatorial Chemistry
inferredcites →https://doi.org/10.1021/cr950066qopenalex-snapshot
Bioisosterism: A Rational Approach in Drug Design
inferredcites →https://doi.org/10.1021/jm00280a002openalex-snapshot
Utilization of operational schemes for analog synthesis in drug design
inferredcites →https://doi.org/10.1021/jm00280a003openalex-snapshot
Relation of structures and microbiological activities of the 16-membered macrolides
inferredcites →https://doi.org/10.1021/jm00290a004openalex-snapshot
Interdependence between physical parameters and selection of substituent groups for correlation studies
inferredcites →https://doi.org/10.1021/jm00290a005openalex-snapshot
Inhibitors and stimulators of cholesterolgenesis enzymes. Structure-activity study in vitro of amino and selected nitrogen-containing analogs of 5.alpha.-cholestane-3.beta.,5.alpha.,6.beta.-triol
inferredcites →https://doi.org/10.1021/jm9903996openalex-snapshot
Properties of Known Drugs. 2. Side Chains
inferredcites →https://doi.org/10.2533/chimia.1998.673openalex-snapshot
QSAR Analysis through the World-Wide Web

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inferred← citeshttps://doi.org/10.1002/9780470451854.ch2openalex-snapshot
Properties that Make a Molecule a Good Drug
inferred← citeshttps://doi.org/10.1002/9780470584170.ch7openalex-snapshot
Role of Natural Products in Drug Discovery
inferred← citeshttps://doi.org/10.1002/9783527628698.hgc120openalex-snapshot
A Tutorial of the Inverse Molecular Design Theory in Tight‐Binding Frameworks and Its Applications
inferred← citeshttps://doi.org/10.1002/9783527628766.biblioopenalex-snapshot
Bibliography
inferred← citeshttps://doi.org/10.1002/9783527645947.ch13openalex-snapshot
Druggability Prediction
inferred← citeshttps://doi.org/10.1002/9783527654307.ch11openalex-snapshot
The Drug Guru Project
inferred← citeshttps://doi.org/10.1002/9783527654307.ch13openalex-snapshot
Perspectives from Medicinal Chemistry
inferred← citeshttps://doi.org/10.1002/9783527654307.ch4openalex-snapshot
B ioster : A Database of Bioisosteres and Bioanalogues
inferred← citeshttps://doi.org/10.1002/9783527654307.ch7openalex-snapshot
Physicochemical Properties
inferred← citeshttps://doi.org/10.1002/9783527654307.ch8openalex-snapshot
Molecular Topology
inferred← citeshttps://doi.org/10.1002/9783527677016.ch15openalex-snapshot
Fragment‐Based Design of Focused Compound Libraries
inferred← citeshttps://doi.org/10.1002/9783527677016.ch17openalex-snapshot
Bioisosteres in De Novo Design
inferred← citeshttps://doi.org/10.1002/9783527677047.ch12openalex-snapshot
A Medicinal Chemistry Perspective on the Hit‐to‐Lead Phase in the Current Era of Drug Discovery
inferred← citeshttps://doi.org/10.1002/9783527683604.ch03openalex-snapshot
Enumeration of Chemical Fragment Space
inferred← citeshttps://doi.org/10.1002/9783527840748.ch14openalex-snapshot
Enumerable Libraries and Accessible Chemical Space in Drug Discovery
inferred← citeshttps://doi.org/10.1002/adma.202303827openalex-snapshot
AI‐Driven Discovery of Amorphous Fluorinated Polymer Electret with Improved Charge Stability for Energy Harvesting
inferred← citeshttps://doi.org/10.1002/adma.202523667openalex-snapshot
Organic Materials of Tomorrow: Horizons of Artificial Intelligence
inferred← citeshttps://doi.org/10.1002/ange.200462457openalex-snapshot
Virtual Exploration of the Small‐Molecule Chemical Universe below 160 Daltons
inferred← citeshttps://doi.org/10.1002/ange.202108067openalex-snapshot
Re‐imagining Priorities for Chemistry: A Central Science for “Freedom from Fear and Want”
inferred← citeshttps://doi.org/10.1002/anie.200462457openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/anie.202108067openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/cbic.202200776openalex-snapshot
Structure‐Based Drug Discovery with Deep Learning**
inferred← citeshttps://doi.org/10.1002/chin.200321198openalex-snapshot
Cheminformatics Analysis of Organic Substituents: Identification of the Most Common Substituents, Calculation of Substituent Properties, and Automatic Identification of Drug‐Like Bioisosteric Groups.
inferred← citeshttps://doi.org/10.1002/cmdc.200700021openalex-snapshot
Chemical Space Travel
inferred← citeshttps://doi.org/10.1002/cmdc.202400381openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/cmdc.202500518openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/cmtd.202200041openalex-snapshot
A Web Tool for Calculating Substituent Descriptors Compatible with Hammett Sigma Constants**
inferred← citeshttps://doi.org/10.1002/ctm2.766openalex-snapshot
It all clicks together: In silico drug discovery becoming mainstream
inferred← citeshttps://doi.org/10.1002/ddr.21034openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/ejoc.201403198openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/hlca.202400175openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/jps.21510openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/med.21255openalex-snapshot
Fragment Informatics and Computational Fragment‐Based Drug Design: An Overview and Update
inferred← citeshttps://doi.org/10.1002/minf.201000019openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/minf.201300041openalex-snapshot
Progress in the Visualization and Mining of Chemical and Target Spaces
inferred← citeshttps://doi.org/10.1002/minf.201400162openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/minf.201600073openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/minf.201700030openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/minf.202200163openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/minf.202300316openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/minf.202400186openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/prot.21405openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/qsar.200960003openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/qua.24687openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/wcms.1104openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/wcms.1134openalex-snapshot
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inferred← citeshttps://doi.org/10.1002/wcms.1148openalex-snapshot
In silico applications of bioisosterism in contemporary medicinal chemistry practice
inferred← citeshttps://doi.org/10.1007/1-4020-4407-0_3openalex-snapshot
Introduction to Fragment Screening
inferred← citeshttps://doi.org/10.1007/7653_2015_51openalex-snapshot
Computational Fragment-Based Drug Design
inferred← citeshttps://doi.org/10.1007/978-1-4614-6064-0_3openalex-snapshot
The Nature of Petroleum
inferred← citeshttps://doi.org/10.1007/978-3-032-19536-4_3openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-3-032-23604-3_2openalex-snapshot
Multi-constrained Evolutionary Molecular Design Framework: An Interpretable Drug Design Method Combining Rule-Based Evolution and Molecular Crossover
inferred← citeshttps://doi.org/10.1007/978-3-642-15361-7_1openalex-snapshot
Principles of Identification
inferred← citeshttps://doi.org/10.1007/978-3-642-45149-2_3openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-3-7643-8595-8_4openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-94-007-2849-3_2openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/978-981-97-2596-0_5openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/s10822-009-9280-5openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/s10822-009-9310-3openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/s10822-012-9609-3openalex-snapshot
IADE: a system for intelligent automatic design of bioisosteric analogs
inferred← citeshttps://doi.org/10.1007/s10822-013-9672-4openalex-snapshot
Estimation of the size of drug-like chemical space based on GDB-17 data
inferred← citeshttps://doi.org/10.1007/s11164-012-0993-zopenalex-snapshot
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inferred← citeshttps://doi.org/10.1007/s11172-010-0063-xopenalex-snapshot
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inferred← citeshttps://doi.org/10.1007/s11172-024-4652-5openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/s11426-007-0056-2openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/s11426-009-0260-3openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/b0-08-045044-x/00255-8openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/b0-08-045044-x/00261-3openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/b978-0-08-099420-8.00003-1openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/b978-0-08-099420-8.00004-3openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/b978-0-12-394399-6.00017-5openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/b978-0-12-409547-2.12347-9openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/b978-0-12-409547-2.12796-9openalex-snapshot
OBSOLETE: Topical Chemical Space in Relation to Biological Space
inferred← citeshttps://doi.org/10.1016/b978-0-12-809633-8.20665-1openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/b978-0-12-820472-6.00208-5openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/b978-0-12-820546-4.00011-8openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/b978-0-32-390644-9.00080-9openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/b978-0-443-29808-0.00045-5openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/b978-008045382-8.00058-7openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.bmc.2006.06.024openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.bmc.2012.02.058openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.bmc.2018.04.033openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.bmc.2021.116562openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.bmc.2023.117194openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.bmcl.2016.06.013openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.cej.2021.132645openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.compbiolchem.2004.11.003openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.cplett.2006.05.050openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.ddtec.2004.10.009openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.ddtec.2004.11.005openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.ddtec.2013.01.004openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.drudis.2007.10.019openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.drudis.2015.04.010openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.drudis.2015.07.012openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.drudis.2022.06.008openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.drudis.2022.103356openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.eq.2016.06.002openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.jmgm.2008.08.005openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.jmgm.2016.09.003openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.physrep.2013.04.002openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.sciaf.2023.e02040openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.trechm.2020.11.004openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.watres.2026.126138openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/s1359-6446(05)03557-9openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/s1741-8364(04)02413-8openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/ac3032542openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/ac800464gopenalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.energyfuels.7b03947openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.0c00290openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.0c01226openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.1c00967openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.1c01130openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.2c00205openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.2c00242openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.2c01407openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.3c01689openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.3c02070openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.4c02373openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.5c01203openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.5c01335openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.5c02450openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.6c00905openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.6c01148openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.7b00020openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.7b00457openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.8b00737openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jcim.9b00367openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jctc.3c00039openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jctc.3c00710openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jctc.3c00920openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jctc.6b01074openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jmedchem.0c00483openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jmedchem.0c01521openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jmedchem.4c02839openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jmedchem.6b01367openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jmedchem.7b00935openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jmedchem.8b01048openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.joc.6c00623openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.joc.7b02565openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acs.jpca.0c05941openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acsami.9b01226openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acschembio.3c00602openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acsomega.1c03934openalex-snapshot
Substituent Effects and the Energetics of Noncatalyzed Aryl Halide Aminations: A Theoretical Investigation
inferred← citeshttps://doi.org/10.1021/ar500432kopenalex-snapshot
The Chemical Space Project
inferred← citeshttps://doi.org/10.1021/bi3005126openalex-snapshot
Fragment-Based Approaches in Drug Discovery and Chemical Biology
inferred← citeshttps://doi.org/10.1021/ci030294iopenalex-snapshot
Development of Neural Network QSPR Models for Hansch Substituent Constants. 2. Applications in QSAR Studies of HIV-1 Reverse Transcriptase and Dihydrofolate Reductase Inhibitors
inferred← citeshttps://doi.org/10.1021/ci050370copenalex-snapshot
Mining a Chemical Database for Fragment Co-occurrence: Discovery of “Chemical Clichés”
inferred← citeshttps://doi.org/10.1021/ci0503964openalex-snapshot
The Quest for Bioisosteric Replacements
inferred← citeshttps://doi.org/10.1021/ci060094hopenalex-snapshot
Recore: A Fast and Versatile Method for Scaffold Hopping Based on Small Molecule Crystal Structure Conformations
inferred← citeshttps://doi.org/10.1021/ci100084sopenalex-snapshot
WizePairZ: A Novel Algorithm to Identify, Encode, and Exploit Matched Molecular Pairs with Unspecified Cores in Medicinal Chemistry
inferred← citeshttps://doi.org/10.1021/ci1002087openalex-snapshot
Natural Product-Like Virtual Libraries: Recursive Atom-Based Enumeration
inferred← citeshttps://doi.org/10.1021/ci100253ropenalex-snapshot
Applicability Domains for Classification Problems: Benchmarking of Distance to Models for Ames Mutagenicity Set
inferred← citeshttps://doi.org/10.1021/ci200136jopenalex-snapshot
Structure-Based Fragment Hopping for Lead Optimization Using Predocked Fragment Database
inferred← citeshttps://doi.org/10.1021/ci200240eopenalex-snapshot
Virtual Libraries of Tetrapyrrole Macrocycles. Combinatorics, Isomers, Product Distributions, and Data Mining
inferred← citeshttps://doi.org/10.1021/ci200521kopenalex-snapshot
The Hydrogen Bond Environments of 1 H -Tetrazole and Tetrazolate Rings: The Structural Basis for Tetrazole–Carboxylic Acid Bioisosterism
inferred← citeshttps://doi.org/10.1021/ci400175fopenalex-snapshot
Enumeration of Virtual Libraries of Combinatorial Modular Macrocyclic (Bracelet, Necklace) Architectures and Their Linear Counterparts
inferred← citeshttps://doi.org/10.1021/ci400235uopenalex-snapshot
Characterization of Heterocyclic Rings through Quantum Chemical Topology
inferred← citeshttps://doi.org/10.1021/ci400432aopenalex-snapshot
Exploring the Biologically Relevant Chemical Space for Drug Discovery
inferred← citeshttps://doi.org/10.1021/ci600395uopenalex-snapshot
A Database of Historically-Observed Chemical Replacements
inferred← citeshttps://doi.org/10.1021/ci600404qopenalex-snapshot
Identification of Potential Small Molecule Peptidomimetics Similar to Motifs in Proteins
inferred← citeshttps://doi.org/10.1021/ci600423uopenalex-snapshot
Virtual Exploration of the Chemical Universe up to 11 Atoms of C, N, O, F: Assembly of 26.4 Million Structures (110.9 Million Stereoisomers) and Analysis for New Ring Systems, Stereochemistry, Physicochemical Properties, Compound Classes, and Drug Discovery
inferred← citeshttps://doi.org/10.1021/ci700120vopenalex-snapshot
MolDiA: A Novel Molecular Diversity Analysis Tool. 1. Principles and Architecture
inferred← citeshttps://doi.org/10.1021/ci700286xopenalex-snapshot
Natural Product-likeness Score and Its Application for Prioritization of Compound Libraries
inferred← citeshttps://doi.org/10.1021/ci700351yopenalex-snapshot
Gradual in Silico Filtering for Druglike Substances
inferred← citeshttps://doi.org/10.1021/ci700424bopenalex-snapshot
Fragment-Based de Novo Ligand Design by Multiobjective Evolutionary Optimization
inferred← citeshttps://doi.org/10.1021/ci800148zopenalex-snapshot
Can Descriptors of the Electron Density Distribution Help To Distinguish Functional Groups?
inferred← citeshttps://doi.org/10.1021/ci800272aopenalex-snapshot
Searching Fragment Spaces with Feature Trees
inferred← citeshttps://doi.org/10.1021/ci8003418openalex-snapshot
Bioisosteric Similarity of Molecules Based on Structural Alignment and Observed Chemical Replacements in Drugs
inferred← citeshttps://doi.org/10.1021/cn3000422openalex-snapshot
Exploring Chemical Space for Drug Discovery Using the Chemical Universe Database
inferred← citeshttps://doi.org/10.1021/cr100233ropenalex-snapshot
Chemistry and Biology Of Multicomponent Reactions
inferred← citeshttps://doi.org/10.1021/ct400706gopenalex-snapshot
Exploring Chemical Space with the Alchemical Derivatives
inferred← citeshttps://doi.org/10.1021/ja0572046openalex-snapshot
Designing Molecules by Optimizing Potentials
inferred← citeshttps://doi.org/10.1021/ja0772041openalex-snapshot
Minimal Pharmacophoric Elements and Fragment Hopping, an Approach Directed at Molecular Diversity and Isozyme Selectivity. Design of Selective Neuronal Nitric Oxide Synthase Inhibitors
inferred← citeshttps://doi.org/10.1021/ja2020313openalex-snapshot
Inverse Design and Synthesis of acac-Coumarin Anchors for Robust TiO2 Sensitization
inferred← citeshttps://doi.org/10.1021/jacs.4c09989openalex-snapshot
Biocatalytic Synthesis of α-Amino Esters via Nitrene C–H Insertion
inferred← citeshttps://doi.org/10.1021/jacs.5c06219openalex-snapshot
Stable and Accurate Orbital-Free Density Functional Theory Powered by Machine Learning
inferred← citeshttps://doi.org/10.1021/jm060217popenalex-snapshot
Quest for the Rings. In Silico Exploration of Ring Universe To Identify Novel Bioactive Heteroaromatic Scaffolds
inferred← citeshttps://doi.org/10.1021/jm060838iopenalex-snapshot
Automatic and Efficient Decomposition of Two-Dimensional Structures of Small Molecules for Fragment-Based High-Throughput Docking
inferred← citeshttps://doi.org/10.1021/jm501894topenalex-snapshot
Understanding Our Love Affair with p -Chlorophenyl: Present Day Implications from Historical Biases of Reagent Selection
inferred← citeshttps://doi.org/10.1021/jm801513zopenalex-snapshot
Heteroaromatic Rings of the Future
inferred← citeshttps://doi.org/10.1021/jo400101dopenalex-snapshot
Pushing the Boundaries of Intrinsically Stable Radicals: Inverse Design Using the Thiadiazinyl Radical as a Template
inferred← citeshttps://doi.org/10.1038/nchem.217openalex-snapshot
The rise of fragment-based drug discovery
inferred← citeshttps://doi.org/10.1038/nrd.2018.116openalex-snapshot
Expanding the medicinal chemistry synthetic toolbox
inferred← citeshttps://doi.org/10.1038/s41467-021-23165-1openalex-snapshot
Crowdsourced mapping of unexplored target space of kinase inhibitors
inferred← citeshttps://doi.org/10.1038/s41586-019-0917-9openalex-snapshot
Ultra-large library docking for discovering new chemotypes
inferred← citeshttps://doi.org/10.1038/s41586-021-04220-9openalex-snapshot
Synthon-based ligand discovery in virtual libraries of over 11 billion compounds
inferred← citeshttps://doi.org/10.1038/s41597-020-00727-4openalex-snapshot
SAVI, in silico generation of billions of easily synthesizable compounds through expert-system type rules
inferred← citeshttps://doi.org/10.1038/s41598-022-04967-9openalex-snapshot
Selecting molecules with diverse structures and properties by maximizing submodular functions of descriptors learned with graph neural networks
inferred← citeshttps://doi.org/10.1038/s42004-023-00926-1openalex-snapshot
Deconstructing allostery by computational assessment of the binding determinants of allosteric PTP1B modulators
inferred← citeshttps://doi.org/10.1038/s42004-025-01758-xopenalex-snapshot
Ultra-large library screening with an evolutionary algorithm in Rosetta (REvoLd)
inferred← citeshttps://doi.org/10.1038/s42256-023-00785-4openalex-snapshot
Neural multi-task learning in drug design
inferred← citeshttps://doi.org/10.1039/9781849735377-00302openalex-snapshot
Expanding the Target Space: Druggability Assessments
inferred← citeshttps://doi.org/10.1039/b610069bopenalex-snapshot
Fragment screening: an introduction
inferred← citeshttps://doi.org/10.1039/c0md00020eopenalex-snapshot
Chemical space as a source for new drugs
inferred← citeshttps://doi.org/10.1039/c1sc00152copenalex-snapshot
Molecular docking for virtual screening of natural product databases
inferred← citeshttps://doi.org/10.1039/c2cp42623dopenalex-snapshot
Inverse design of molecules with optimal reactivity properties: acidity of 2-naphthol derivatives
inferred← citeshttps://doi.org/10.1039/c5cp02177dopenalex-snapshot
Smooth heuristic optimization on a complex chemical subspace
inferred← citeshttps://doi.org/10.1039/c5np00029gopenalex-snapshot
Chemical signals in terrestrial vertebrates: search for design features
inferred← citeshttps://doi.org/10.1039/c6cp06187gopenalex-snapshot
Exploring experimental fitness landscapes for chemical synthesis and property optimization
inferred← citeshttps://doi.org/10.1039/c7me00126fopenalex-snapshot
Enriched optimization of molecular properties under constraints: an electrochromic example
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