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Chemometrical Classification of Ephrin Ligands and Eph Kinases Using GRID/CPCA Approach
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/(sici)1099-128x(199809/10)12:5<301::aid-cem515>3.0.co;2-sopenalex-snapshot
Analysis of multiblock and hierarchical PCA and PLS models
inferredcites →https://doi.org/10.1002/elps.1150181505openalex-snapshot
SWISS‐MODEL and the Swiss‐Pdb Viewer: An environment for comparative protein modeling
inferredcites →https://doi.org/10.1002/prot.340120407openalex-snapshot
Stereochemical quality of protein structure coordinates
inferredcites →https://doi.org/10.1006/jmbi.1993.1626openalex-snapshot
Comparative Protein Modelling by Satisfaction of Spatial Restraints
inferredcites →https://doi.org/10.1006/jmbi.1994.1334openalex-snapshot
Satisfying Hydrogen Bonding Potential in Proteins
inferredcites →https://doi.org/10.1016/0169-7439(87)80084-9openalex-snapshot
Principal component analysis
inferredcites →https://doi.org/10.1016/s0092-8674(00)80500-0openalex-snapshot
Unified Nomenclature for Eph Family Receptors and Their Ligands, the Ephrins
inferredcites →https://doi.org/10.1016/s0968-0004(98)01285-7openalex-snapshot
Multiple sequence alignment with Clustal X
inferredcites →https://doi.org/10.1016/s1359-6101(01)00031-4openalex-snapshot
The ephrins and Eph receptors in angiogenesis
inferredcites →https://doi.org/10.1016/s1367-5931(00)00164-2openalex-snapshot
Protein structure prediction
inferredcites →https://doi.org/10.1016/s1534-5807(01)00002-8openalex-snapshot
Crystal Structure of an Ephrin Ectodomain
inferredcites →https://doi.org/10.1021/jm000934yopenalex-snapshot
GRID/CPCA: A New Computational Tool To Design Selective Ligands
inferredcites →https://doi.org/10.1021/jm00145a002openalex-snapshot
A computational procedure for determining energetically favorable binding sites on biologically important macromolecules
inferredcites →https://doi.org/10.1021/jm00145a003openalex-snapshot
Comparative computer graphics and solution studies of the DNA interaction of substituted anthraquinones based on doxorubicin and mitoxantrone
inferredcites →https://doi.org/10.1021/jm0109107openalex-snapshot
Analysis of Selective Regions in the Active Sites of Human Cytochromes P450, 2C8, 2C9, 2C18, and 2C19 Homology Models Using GRID/CPCA
inferredcites →https://doi.org/10.1021/jm011002copenalex-snapshot
Structural Classification of Protein Kinases Using 3D Molecular Interaction Field Analysis of Their Ligand Binding Sites: Target Family Landscapes
inferredcites →https://doi.org/10.1038/24904openalex-snapshot
Crystal structure of the ligand-binding domain of the receptor tyrosine kinase EphB2
inferredcites →https://doi.org/10.1038/35000008openalex-snapshot
Activation of EphA2 kinase suppresses integrin function and causes focal-adhesion-kinase dephosphorylation
inferredcites →https://doi.org/10.1038/35058515openalex-snapshot
Multiple roles of eph receptors and ephrins in neural development
inferredcites →https://doi.org/10.1038/35074604openalex-snapshot
Activation of EphA receptor tyrosine kinase inhibits the Ras/MAPK pathway
inferredcites →https://doi.org/10.1038/383722a0openalex-snapshot
Bidirectional signalling through the EPH-family receptor Nuk and its transmembrane ligands
inferredcites →https://doi.org/10.1038/414933aopenalex-snapshot
Crystal structure of an Eph receptor–ephrin complex
inferredcites →https://doi.org/10.1038/414938aopenalex-snapshot
Erratum: correction: Neurogenesis in the adult is involved in the formation of trace memories
inferredcites →https://doi.org/10.1038/nrm856openalex-snapshot
Mechanisms and functions of eph and ephrin signalling
inferredcites →https://doi.org/10.1038/sj.onc.1203856openalex-snapshot
Eph receptors and ephrin ligands: embryogenesis to tumorigenesis
inferredcites →https://doi.org/10.1093/protein/8.2.127openalex-snapshot
LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions
inferredcites →https://doi.org/10.1107/s0021889892009282openalex-snapshot
The FROG PC series: programs for electron-density and model investigations for proteins
inferredcites →https://doi.org/10.1107/s0021889892009944openalex-snapshot
PROCHECK: a program to check the stereochemical quality of protein structures
inferredcites →https://doi.org/10.1110/ps.9.9.1753openalex-snapshot
Modeling of loops in protein structures
inferredcites →https://doi.org/10.1146/annurev.biophys.29.1.291openalex-snapshot
Comparative Protein Structure Modeling of Genes and Genomes
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.1002/9783527619368.ch19openalex-snapshot
Efficient Strategies for Lead Optimization by Simultaneously Addressing Affinity, Selectivity and Pharmacokinetic Parameters
inferred← citeshttps://doi.org/10.1002/chin.200336185openalex-snapshot
Chemometrical Classification of Ephrin Ligands and Eph Kinases Using GRID/CPCA Approach.
inferred← citeshttps://doi.org/10.1007/978-1-60327-118-9_9openalex-snapshot
The Classification of HLA Supertypes by GRID/CPCA and Hierarchical Clustering Methods
inferred← citeshttps://doi.org/10.1007/978-1-60761-274-2_12openalex-snapshot
Structure-Based Chemogenomics: Analysis of Protein Family Landscapes
inferred← citeshttps://doi.org/10.1016/b978-0-12-809633-8.20189-1openalex-snapshot
Chemoinformatics: From Chemical Art to Chemistry in Silico
inferred← citeshttps://doi.org/10.1016/b978-0-323-95502-7.00027-0openalex-snapshot
Chemoinformatics: Coding Chemistry for Bioinformatics
inferred← citeshttps://doi.org/10.1016/j.cmet.2006.05.012openalex-snapshot
Bidirectional ephrinB2-EphB4 signaling controls bone homeostasis
inferred← citeshttps://doi.org/10.1016/j.drudis.2008.12.006openalex-snapshot
Molecular fields in drug discovery: getting old or reaching maturity?
inferred← citeshttps://doi.org/10.1016/j.ejmech.2006.12.028openalex-snapshot
In-silico drug screening method based on the protein–compound affinity matrix using the factor selection technique
inferred← citeshttps://doi.org/10.1016/j.farmac.2004.05.010openalex-snapshot
Sequence and structural analysis of kinase ATP pocket residues
inferred← citeshttps://doi.org/10.1016/s1574-1400(05)01013-3openalex-snapshot
Chapter 13 Targeting the Kinome with Computational Chemistry
inferred← citeshttps://doi.org/10.1016/s1574-1400(08)00002-9openalex-snapshot
Predicting Selectivity and Druggability in Drug Discovery
inferred← citeshttps://doi.org/10.1074/jbc.m110.166900openalex-snapshot
Strain-dependent Up-regulation of Ephrin-B2 Protein in Periodontal Ligament Fibroblasts Contributes to Osteogenesis during Tooth Movement
inferred← citeshttps://doi.org/10.1080/15216540412331270076openalex-snapshot
Ephrins and their Receptors: Binding versus Biology
inferred← citeshttps://doi.org/10.1111/jre.12463openalex-snapshot
Porphyromonas gingivalis lipopolysaccharide regulates ephrin/Eph signalling in human periodontal ligament fibroblasts
inferred← citeshttps://doi.org/10.1186/ar2782openalex-snapshot
Treatment with ephrin B2 positively impacts the abnormal metabolism of human osteoarthritic chondrocytes
inferred← citeshttps://doi.org/10.1186/s13287-019-1540-2openalex-snapshot
EphrinB2 overexpression enhances osteogenic differentiation of dental pulp stem cells partially through ephrinB2-mediated reverse signaling
inferred← citeshttps://doi.org/10.1371/journal.pone.0042120openalex-snapshot
A Small Molecule Agonist of EphA2 Receptor Tyrosine Kinase Inhibits Tumor Cell Migration In Vitro and Prostate Cancer Metastasis In Vivo
inferred← citeshttps://doi.org/10.1517/17460441003652959openalex-snapshot
The GRID/CPCA approach in drug discovery
inferred← citeshttps://doi.org/10.4049/jimmunol.174.11.7085openalex-snapshot
In Silico Identification of Supertypes for Class II MHCs
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