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Using Inverted Indices for Accelerating LINGO Calculations

https://doi.org/10.1021/ci100437e
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/s10910-010-9668-4openalex-snapshot
Transforming Tanimoto queries on real valued vectors to range queries in Euclidian space
inferredcites →https://doi.org/10.1021/ci00057a005openalex-snapshot
SMILES, a chemical language and information system. 1. Introduction to methodology and encoding rules
inferredcites →https://doi.org/10.1021/ci025584yopenalex-snapshot
The Chemistry Development Kit (CDK): An Open-Source Java Library for Chemo- and Bioinformatics
inferredcites →https://doi.org/10.1021/ci0496797openalex-snapshot
LINGO, an Efficient Holographic Text Based Method To Calculate Biophysical Properties and Intermolecular Similarities
inferredcites →https://doi.org/10.1021/ci049714+openalex-snapshot
ZINC − A Free Database of Commercially Available Compounds for Virtual Screening
inferredcites →https://doi.org/10.1021/ci100011zopenalex-snapshot
SIML: A Fast SIMD Algorithm for Calculating LINGO Chemical Similarities on GPUs and CPUs
inferredcites →https://doi.org/10.1021/ci6002152openalex-snapshot
Lingos, Finite State Machines, and Fast Similarity Searching
inferredcites →https://doi.org/10.1021/ci600358fopenalex-snapshot
Bounds and Algorithms for Fast Exact Searches of Chemical Fingerprints in Linear and Sublinear Time
inferredcites →https://doi.org/10.1021/ci700052xopenalex-snapshot
Comparison of Topological, Shape, and Docking Methods in Virtual Screening
inferredcites →https://doi.org/10.1021/ci800076sopenalex-snapshot
Speeding Up Chemical Database Searches Using a Proximity Filter Based on the Logical Exclusive OR
inferredcites →https://doi.org/10.1021/ci800303kopenalex-snapshot
Comparison of Ligand- and Structure-Based Virtual Screening on the DUD Data Set
inferredcites →https://doi.org/10.1021/ci800325vopenalex-snapshot
Compressed Binary Bit Trees: A New Data Structure For Accelerating Database Searching
inferredcites →https://doi.org/10.1021/ja902302hopenalex-snapshot
970 Million Druglike Small Molecules for Virtual Screening in the Chemical Universe Database GDB-13
inferredcites →https://doi.org/10.1109/icde.2008.4497434openalex-snapshot
Efficient Merging and Filtering Algorithms for Approximate String Searches
inferredcites →https://doi.org/10.1145/1007568.1007652openalex-snapshot
Efficient set joins on similarity predicates
inferredcites →https://doi.org/10.1145/360825.360855openalex-snapshot
Efficient string matching
inferredcites →https://doi.org/10.1186/1748-7188-5-9openalex-snapshot
A tree-based method for the rapid screening of chemical fingerprints

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1002/9781118742785.ch5openalex-snapshot
STABILITY IN MOLECULAR FINGERPRINT COMPARISON
inferred← citeshttps://doi.org/10.1007/978-3-319-68474-1_14openalex-snapshot
Scalable Similarity Search for Molecular Descriptors
inferred← citeshttps://doi.org/10.1007/978-3-642-40511-2_5openalex-snapshot
A Fully Reversible Data Transform Technique Enhancing Data Compression of SMILES Data
inferred← citeshttps://doi.org/10.1007/s41060-017-0064-zopenalex-snapshot
Efficient identification of Tanimoto nearest neighbors
inferred← citeshttps://doi.org/10.1016/j.bmc.2012.03.030openalex-snapshot
Chemoinformatics: A view of the field and current trends in method development
inferred← citeshttps://doi.org/10.1021/ci200235eopenalex-snapshot
Anatomy of High-Performance 2D Similarity Calculations
inferred← citeshttps://doi.org/10.1021/ci200552ropenalex-snapshot
Speeding Up Chemical Searches Using the Inverted Index: The Convergence of Chemoinformatics and Text Search Methods
inferred← citeshttps://doi.org/10.1021/ci400206hopenalex-snapshot
SMIfp (SMILES fingerprint) Chemical Space for Virtual Screening and Visualization of Large Databases of Organic Molecules
inferred← citeshttps://doi.org/10.1021/ci500150topenalex-snapshot
Blocked Inverted Indices for Exact Clustering of Large Chemical Spaces
inferred← citeshttps://doi.org/10.1109/dsaa.2016.23openalex-snapshot
Efficient Identification of Tanimoto Nearest Neighbors
inferred← citeshttps://doi.org/10.1177/0269881116653109openalex-snapshot
Gene-set analysis based on the pharmacological profiles of drugs to identify repurposing opportunities in schizophrenia
inferred← citeshttps://doi.org/10.14569/ijacsa.2019.0100505openalex-snapshot
Storage Consumption Reduction using Improved Inverted Indexing for Similarity Search on LINGO Profiles
inferred← citeshttps://doi.org/10.4155/fmc.12.126openalex-snapshot
Fingerprint Design And Engineering Strategies: Rationalizing And Improving Similarity Search Performance
inferred← citeshttps://doi.org/10.5936/csbj.201302009openalex-snapshot
METHODS FOR SIMILARITY-BASED VIRTUAL SCREENING
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