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Assessing the Confidence Level of Public Domain Compound Activity Data and the Impact of Alternative Potency Measurements on SAR Analysis

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/cmdc.201100179openalex-snapshot
From Activity Cliffs to Target‐Specific Scoring Models and Pharmacophore Hypotheses
inferredcites →https://doi.org/10.1002/qsar.200610069openalex-snapshot
Towards Unified Compound Screening Strategies: A Critical Evaluation of Error Sources in Experimental and Virtual High‐Throughput Screening
inferredcites →https://doi.org/10.1007/s10822-009-9260-9openalex-snapshot
ChEMBL. An interview with John Overington, team leader, chemogenomics at the European Bioinformatics Institute Outstation of the European Molecular Biology Laboratory (EMBL-EBI)
inferredcites →https://doi.org/10.1016/j.chemosphere.2004.07.001openalex-snapshot
Reducing bioassay variability by identifying sources of variation and controlling key parameters in assay protocol
inferredcites →https://doi.org/10.1021/ci060117sopenalex-snapshot
On Outliers and Activity CliffsWhy QSAR Often Disappoints
inferredcites →https://doi.org/10.1021/ci100050topenalex-snapshot
Extended-Connectivity Fingerprints
inferredcites →https://doi.org/10.1021/ci900243aopenalex-snapshot
Structural Interpretation of Activity Cliffs Revealed by Systematic Analysis of Structure−Activity Relationships in Analog Series
inferredcites →https://doi.org/10.1021/jm0582165openalex-snapshot
Searching Techniques for Databases of Two- and Three-Dimensional Chemical Structures
inferredcites →https://doi.org/10.1021/jm100933wopenalex-snapshot
Activity Landscape Representations for Structure−Activity Relationship Analysis
inferredcites →https://doi.org/10.1021/jm800867gopenalex-snapshot
Structure−Activity Relationship Anatomy by Network-like Similarity Graphs and Local Structure−Activity Relationship Indices
inferredcites →https://doi.org/10.1038/nbt1186openalex-snapshot
Statistical practice in high-throughput screening data analysis
inferredcites →https://doi.org/10.1093/nar/gkl999openalex-snapshot
BindingDB: a web-accessible database of experimentally determined protein-ligand binding affinities
inferredcites →https://doi.org/10.1111/j.1747-0285.2011.01150.xopenalex-snapshot
Comprehensive Analysis of Single‐ and Multi‐Target Activity Cliffs Formed by Currently Available Bioactive Compounds
inferredcites →https://doi.org/10.1177/1087057103258285openalex-snapshot
Improved Statistical Methods for Hit Selection in High-Throughput Screening
inferredcites →https://doi.org/10.1373/clinchem.2005.056499openalex-snapshot
Variation with Time in Components of Variance for Measurements of Therapeutic Drugs

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1002/9781118618110.ch16openalex-snapshot
Structure–Activity Relationship Data Analysis: Activity Landscapes and Activity Cliffs
inferred← citeshttps://doi.org/10.1002/minf.201300102openalex-snapshot
Extensions to In Silico Bioactivity Predictions Using Pathway Annotations and Differential Pharmacology Analysis: Application to Xenopus laevis Phenotypic Readouts
inferred← citeshttps://doi.org/10.1016/j.drudis.2014.02.003openalex-snapshot
Activity cliffs in drug discovery: Dr Jekyll or Mr Hyde?
inferred← citeshttps://doi.org/10.1021/acs.jcim.5b00018openalex-snapshot
Strong Nonadditivity as a Key Structure–Activity Relationship Feature: Distinguishing Structural Changes from Assay Artifacts
inferred← citeshttps://doi.org/10.1021/acsptsci.5c00677openalex-snapshot
Decoding of Inconsistent Biological Data: A Critical Step toward Enhanced AI Predictivity in Drug Discovery
inferred← citeshttps://doi.org/10.1021/bk-2016-1222.ch002openalex-snapshot
Complexity and Heterogeneity of Data for Chemical Information Science
inferred← citeshttps://doi.org/10.1021/ci300033eopenalex-snapshot
Exploration of 3D Activity Cliffs on the Basis of Compound Binding Modes and Comparison of 2D and 3D Cliffs
inferred← citeshttps://doi.org/10.1021/ci3001138openalex-snapshot
MMP-Cliffs: Systematic Identification of Activity Cliffs on the Basis of Matched Molecular Pairs
inferred← citeshttps://doi.org/10.1021/ci300274copenalex-snapshot
Extending the Activity Cliff Concept: Structural Categorization of Activity Cliffs and Systematic Identification of Different Types of Cliffs in the ChEMBL Database
inferred← citeshttps://doi.org/10.1021/ci300288fopenalex-snapshot
Frequency of Occurrence and Potency Range Distribution of Activity Cliffs in Bioactive Compounds
inferred← citeshttps://doi.org/10.1021/ci4007547openalex-snapshot
inSARa: Intuitive and Interactive SAR Interpretation by Reduced Graphs and Hierarchical MCS-Based Network Navigation
inferred← citeshttps://doi.org/10.1021/ci5005509openalex-snapshot
Influence of Search Parameters and Criteria on Compound Selection, Promiscuity, and Pan Assay Interference Characteristics
inferred← citeshttps://doi.org/10.1021/jm201706bopenalex-snapshot
Exploring Activity Cliffs in Medicinal Chemistry
inferred← citeshttps://doi.org/10.1021/jm300131xopenalex-snapshot
The Experimental Uncertainty of Heterogeneous Public Ki Data
inferred← citeshttps://doi.org/10.1021/jm401120gopenalex-snapshot
Recent Progress in Understanding Activity Cliffs and Their Utility in Medicinal Chemistry
inferred← citeshttps://doi.org/10.1109/iceitsa57468.2022.00045openalex-snapshot
Construction and Algorithm Research of UAV Airborne Microwave Radar Imaging System
inferred← citeshttps://doi.org/10.12688/f1000research.1-11.v1openalex-snapshot
Freely available compound data sets and software tools for chemoinformatics and computational medicinal chemistry applications
inferred← citeshttps://doi.org/10.12688/f1000research.3713.1openalex-snapshot
Compound data sets and software tools for chemoinformatics and medicinal chemistry applications: update and data transfer
inferred← citeshttps://doi.org/10.3410/f1000research.1-11.v1openalex-snapshot
Freely available compound data sets and software tools for chemoinformatics and computational medicinal chemistry applications
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