On the public citation graph

Three-Dimensional Structure Database of Natural Metabolites (3DMET): A Novel Database of Curated 3D Structures

https://doi.org/10.1021/ci300309k
0 signed · 53 inferred · view as graph

Inferred edges come from two machine sources: sweeps of open repository metadata (mostly SSRN and Zenodo), and a bulk OpenAlex citation snapshot. Every row below is labelled with the one it came from. Neither is a complete citation index — absence here is not evidence of absence.

Is this your work? Sign in with ORCID and put your name on the claims that are yours.
Claim with ORCID
Reference health. See whether every reference in this work resolves to a known work and none has been retracted — and get a dated CiteStamped badge you can embed.
See reference health

What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/qsar.19890080104openalex-snapshot
Model Solvent Systems for QSAR Part I. Propylene Glycol Dipelargonate (PGDP). A new Standard Solvent for use in Partition Coefficient Determination
inferredcites →https://doi.org/10.1016/j.drudis.2009.04.006openalex-snapshot
Homology modeling in drug discovery: current trends and applications
inferredcites →https://doi.org/10.1021/cen-v030n034.p3523openalex-snapshot
Thw Wiswesser Line Formula Notation
inferredcites →https://doi.org/10.1021/ci00007a012openalex-snapshot
Description of several chemical structure file formats used by computer programs developed at Molecular Design Limited
inferredcites →https://doi.org/10.1021/ci00057a005openalex-snapshot
SMILES, a chemical language and information system. 1. Introduction to methodology and encoding rules
inferredcites →https://doi.org/10.1021/ci00062a008openalex-snapshot
SMILES. 2. Algorithm for generation of unique SMILES notation
inferredcites →https://doi.org/10.1021/ci034244popenalex-snapshot
Chemical Markup, XML, and the World Wide Web. 5. Applications of Chemical Metadata in RSS Aggregators
inferredcites →https://doi.org/10.1021/ci049714+openalex-snapshot
ZINC − A Free Database of Commercially Available Compounds for Virtual Screening
inferredcites →https://doi.org/10.1021/ci960109jopenalex-snapshot
SYBYL Line Notation (SLN): A Versatile Language for Chemical Structure Representation
inferredcites →https://doi.org/10.1021/ci9801318openalex-snapshot
Enhanced 3D-Databases: A Fully Electrostatic Database of AM1-Optimized Structures
inferredcites →https://doi.org/10.1021/ci990307lopenalex-snapshot
Prediction of Physicochemical Parameters by Atomic Contributions
inferredcites →https://doi.org/10.1021/cr00020a001openalex-snapshot
Calculating log Poct from structures
inferredcites →https://doi.org/10.1021/cr00023a012openalex-snapshot
From atoms and bonds to three-dimensional atomic coordinates: automatic model builders
inferredcites →https://doi.org/10.1021/jm000942eopenalex-snapshot
Fast Calculation of Molecular Polar Surface Area as a Sum of Fragment-Based Contributions and Its Application to the Prediction of Drug Transport Properties
inferredcites →https://doi.org/10.1021/js9804011openalex-snapshot
Rapid calculation of polar molecular surface area and its application to the prediction of transport phenomena. 1. Prediction of intestinal absorption
inferredcites →https://doi.org/10.1023/b:jcam.0000017372.32162.37openalex-snapshot
Computational models to predict blood–brain barrier permeation and CNS activity
inferredcites →https://doi.org/10.1074/jbc.m502332200openalex-snapshot
Elucidation of Gene-to-Gene and Metabolite-to-Gene Networks inArabidopsis by Integration of Metabolomics andTranscriptomics
inferredcites →https://doi.org/10.1074/jbc.m601876200openalex-snapshot
Differential Metabolomics Reveals Ophthalmic Acid as an Oxidative Stress Biomarker Indicating Hepatic Glutathione Consumption
inferredcites →https://doi.org/10.1093/bioinformatics/14.7.591openalex-snapshot
LIGAND: chemical database for enzyme reactions.
inferredcites →https://doi.org/10.1093/nar/gkm791openalex-snapshot
ChEBI: a database and ontology for chemical entities of biological interest
inferredcites →https://doi.org/10.1093/nar/gkm843openalex-snapshot
ChemBank: a small-molecule screening and cheminformatics resource database
inferredcites →https://doi.org/10.1093/nar/gkq1021openalex-snapshot
The RCSB Protein Data Bank: redesigned web site and web services
inferredcites →https://doi.org/10.1101/gr.5509507openalex-snapshot
Curated genome annotation ofOryza sativassp.japonicaand comparative genome analysis withArabidopsis thaliana
inferredcites →https://doi.org/10.1126/science.257.5073.1078openalex-snapshot
Structure-Based Strategies for Drug Design and Discovery
inferredcites →https://doi.org/10.5402/2012/726429openalex-snapshot
Partitioning a PPI Network into Overlapping Modules Constrained by High-Density and Periphery Tracking

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1002/9783527806539.ch6copenalex-snapshot
Chemoinformatics in Natural Product Research
inferred← citeshttps://doi.org/10.1007/978-1-4939-7404-7_19openalex-snapshot
Computational Modeling of Multi-target-Directed Inhibitors Against Alzheimer’s Disease
inferred← citeshttps://doi.org/10.1007/978-981-19-5779-6_14openalex-snapshot
Databases Relevant to Phytochemicals and Genes That Govern Biosynthesis of the Phytochemicals
inferred← citeshttps://doi.org/10.1007/978-981-99-1316-9_5openalex-snapshot
Computational Methods in Natural Products-Based Drug Discovery
inferred← citeshttps://doi.org/10.1007/s10822-015-9854-3openalex-snapshot
Many InChIs and quite some feat
inferred← citeshttps://doi.org/10.1007/s11101-025-10198-3openalex-snapshot
Navigating the chemical space of natural products from diverse sources: a chemoinformatics perspective
inferred← citeshttps://doi.org/10.1016/b978-0-323-90593-0.00007-1openalex-snapshot
Informatics and databases for phytochemical drug discovery
inferred← citeshttps://doi.org/10.1016/b978-0-443-15457-7.00001-0openalex-snapshot
Deciphering the scope of in silico screening of novel natural lead molecules against putative molecular targets of multidrug-resistant bacterial pathogens
inferred← citeshttps://doi.org/10.1016/bs.mie.2025.03.002openalex-snapshot
Genome-based discovery of polyketides generated by trans-acyltransferase polyketide synthases
inferred← citeshttps://doi.org/10.1016/j.foodres.2024.115100openalex-snapshot
Flavor Engineering: A comprehensive review of biological foundations, AI integration, industrial development, and socio-cultural dynamics
inferred← citeshttps://doi.org/10.1016/j.jrras.2025.101789openalex-snapshot
Real time thermal radiation image system based on virtual reality for sports training simulation development: sports thermal energy monitoring
inferred← citeshttps://doi.org/10.1021/acs.jcim.1c00083openalex-snapshot
The SistematX Web Portal of Natural Products: An Update
inferred← citeshttps://doi.org/10.1038/s41401-024-01353-1openalex-snapshot
Overview and limitations of database in global traditional medicines: A narrative review
inferred← citeshttps://doi.org/10.1039/d6np00002aopenalex-snapshot
Chemical language models for natural product discovery
inferred← citeshttps://doi.org/10.1093/database/bau055openalex-snapshot
TIPdb-3D: the three-dimensional structure database of phytochemicals from Taiwan indigenous plants
inferred← citeshttps://doi.org/10.1109/icaibd51990.2021.9459017openalex-snapshot
Overview: The Databases of Chemical Components of Traditional Chinese Medicine
inferred← citeshttps://doi.org/10.1111/cpr.12190openalex-snapshot
Review of natural product databases
inferred← citeshttps://doi.org/10.1142/s2737416522500302openalex-snapshot
IMPDB: Indian Medicinal Phytochemical Database Curated for Drug Designing
inferred← citeshttps://doi.org/10.1155/2021/9990020openalex-snapshot
The Combination of Tradition and Future: Data-Driven Natural-Product-Based Treatments for Parkinson’s Disease
inferred← citeshttps://doi.org/10.1186/s13321-020-00424-9openalex-snapshot
Review on natural products databases: where to find data in 2020
inferred← citeshttps://doi.org/10.1371/journal.pone.0216619openalex-snapshot
Chronotype mediates gender differences in risk propensity and risk-taking
inferred← citeshttps://doi.org/10.1515/psr-2018-0105openalex-snapshot
A primer on natural product-based virtual screening
inferred← citeshttps://doi.org/10.20944/preprints201912.0332.v1openalex-snapshot
On the Redundancy of Natural Products Public Databases and Where to Find Data in 2020 - A Review on Natural Products Databases
inferred← citeshttps://doi.org/10.21203/rs.3.rs-1599774/v1openalex-snapshot
Chemical-Data-Driven Validation of Physical Theories of Liquid Crystals
inferred← citeshttps://doi.org/10.2142/biophysico.15.0_87openalex-snapshot
Chemical curation to improve data accuracy: recent development of the 3DMET database
inferred← citeshttps://doi.org/10.3389/fbioe.2015.00066openalex-snapshot
Current Challenges in Development of a Database of Three-Dimensional Chemical Structures
inferred← citeshttps://doi.org/10.3389/fcell.2021.738838openalex-snapshot
Translational Informatics for Natural Products as Antidepressant Agents
inferred← citeshttps://doi.org/10.3390/molecules26041124openalex-snapshot
PSC-db: A Structured and Searchable 3D-Database for Plant Secondary Compounds
Editorial review for independent work. ICSAC — the Institute for Complexity Science and Advanced Computing — runs a structured editorial panel for researchers publishing outside journals, and publishes on CiteStamp rails. Submission is free and goes through ORCID: icsacinstitute.org/submit.