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Highly SpecIfic and Sensitive Pharmacophore Model for Identifying CXCR4 Antagonists. Comparison with Docking and Shape-Matching Virtual Screening Performance
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Outgoing claims: the papers this work cites, builds on, or argues with.
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Applying in silico tools to the discovery of novel CXCR4 inhibitors
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AutoDock Vina: Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading
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CHARMM : A program for macromolecular energy, minimization, and dynamics calculations
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Gaussian basis sets for the fifth row elements, Mo‐Cd, and the sixth row elements W‐RN
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Validation of the general purpose tripos 5.2 force field
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Improved protein–ligand docking using GOLD
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A Low-Molecular-Weight Inhibitor against the Chemokine Receptor CXCR4: A Strong Anti-HIV Peptide T140
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Bias, reporting, and sharing: computational evaluations of docking methods
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Ligand-guided optimization of CXCR4 homology models for virtual screening using a multiple chemotype approach
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Antiviral activity of the bicyclam derivative JM3100 against drug-resistant strains of human immunodeficiency virus type 1
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Molecular recognition of the inhibitor AG-1343 by HIV-1 protease: conformationally flexible docking by evolutionary programming
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Entry inhibitors in the treatment of HIV-1 infection
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AMD3465, a monomacrocyclic CXCR4 antagonist and potent HIV entry inhibitor
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Pharmacology of AMD3465: A small molecule antagonist of the chemokine receptor CXCR4
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Amine substituted N-(1H-benzimidazol-2ylmethyl)-5,6,7,8-tetrahydro-8-quinolinamines as CXCR4 antagonists with potent activity against HIV-1
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Imidazopyridine-5,6,7,8-tetrahydro-8-quinolinamine derivatives with potent activity against HIV-1
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Synthesis of a novel tricyclic 1,2,3,4,4a,5,6,10b-octahydro-1,10-phenanthroline ring system and CXCR4 antagonists with potent activity against HIV-1
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Novel N-substituted benzimidazole CXCR4 antagonists as potential anti-HIV agents
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Design of novel CXCR4 antagonists that are potent inhibitors of T-tropic (X4) HIV-1 replication
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Consensus scoring for protein–ligand interactions
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Dimerization of chemokine receptors in living cells: key to receptor function and novel targets for therapy
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The use of receiver operating characteristic curves in biomedical informatics
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LigScore: a novel scoring function for predicting binding affinities
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Impact of the CXCR4 structure on docking-based virtual screening of HIV entry inhibitors
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An introduction to ROC analysis
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Importance of the extracellular loops in G protein-coupled receptors for ligand recognition and receptor activation
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Mutations at the CXCR4 interaction sites for AMD3100 influence anti‐CXCR4 antibody binding and HIV‐1 entry
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Activity of Different Bicyclam Derivatives against Human Immunodeficiency Virus Depends on Their Interaction with the CXCR4 Chemokine Receptor
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Inhibition of HIV Infection by Bicyclams, Highly Potent and Specific CXCR4 Antagonists
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Synthesis and evaluation of benzophenone-based photoaffinity labeling analogs of prenyl pyrophosphates containing stable amide linkages
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Virtual Screening Using Protein−Ligand Docking: Avoiding Artificial Enrichment
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An Extensive Test of 14 Scoring Functions Using the PDBbind Refined Set of 800 Protein−Ligand Complexes
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LigandScout: 3-D Pharmacophores Derived from Protein-Bound Ligands and Their Use as Virtual Screening Filters
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An Analytical, Variable Resolution, Complete Description of Static Molecules and Their Intermolecular Binding Properties
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Comprehensive Comparison of Ligand-Based Virtual Screening Tools Against the DUD Data set Reveals Limitations of Current 3D Methods
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Comparison of Ligand-Based and Receptor-Based Virtual Screening of HIV Entry Inhibitors for the CXCR4 and CCR5 Receptors Using 3D Ligand Shape Matching and Ligand−Receptor Docking
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Comparison of Shape-Matching and Docking as Virtual Screening Tools
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Orally Bioavailable Isothioureas Block Function of the Chemokine Receptor CXCR4 In Vitro and In Vivo
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Synthesis and Structure−Activity Relationships of Phenylenebis(methylene)- Linked Bis-azamacrocycles That Inhibit HIV-1 and HIV-2 Replication by Antagonism of the Chemokine Receptor CXCR4
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A duodenally absorbable CXC chemokine receptor 4 antagonist, KRH-1636, exhibits a potent and selective anti-HIV-1 activity
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Molecular Interactions of Cyclam and Bicyclam Non-peptide Antagonists with the CXCR4 Chemokine Receptor
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Lipid Bilayer Simulations of CXCR4 with Inverse Agonists and Weak Partial Agonists
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Molecular Mechanism of AMD3100 Antagonism in the CXCR4 Receptor
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Molecular Mechanism of Action of Monocyclam Versus Bicyclam Non-peptide Antagonists in the CXCR4 Chemokine Receptor
inferredcites →https://doi.org/10.1074/jbc.m705302200openalex-snapshot
Allosteric Transinhibition by Specific Antagonists in CCR2/CXCR4 Heterodimers
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Small Neutralizing Molecules to Inhibit Actions of the Chemokine CXCL12
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Berberine potently inhibits protein tyrosine phosphatase 1B: Investigation by docking simulation and experimental validation
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ROC analysis: applications to the classification of biological sequences and 3D structures
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Insight into the Binding Mode for Cyclopentapeptide Antagonists of the CXCR4 Receptor
inferredcites →https://doi.org/10.1124/mol.107.042911openalex-snapshot
Anti-HIV Activity and Resistance Profile of the CXC Chemokine Receptor 4 Antagonist POL3026
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Comparison of the Potential Multiple Binding Modes of Bicyclam, Monocylam, and Noncyclam Small-Molecule CXC Chemokine Receptor 4 Inhibitors
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Structures of the CXCR4 Chemokine GPCR with Small-Molecule and Cyclic Peptide Antagonists
inferredcites →https://doi.org/10.1128/aac.01293-09openalex-snapshot
Blockade of X4-Tropic HIV-1 Cellular Entry by GSK812397, a Potent Noncompetitive CXCR4 Receptor Antagonist
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The Novel CXCR4 Antagonist KRH-3955 Is an Orally Bioavailable and Extremely Potent Inhibitor of Human Immunodeficiency Virus Type 1 Infection: Comparative Studies with AMD3100
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Bicyclams, Selective Antagonists of the Human Chemokine Receptor CXCR4, Potently Inhibit Feline Immunodeficiency Virus Replication
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Inhibition of Human Immunodeficiency Virus Replication by a Dual CCR5/CXCR4 Antagonist
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A receiver operating characteristic partial area index for highly sensitive diagnostic tests.
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Analyzing a Portion of the ROC Curve
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Computational analysis of the structural mechanism of inhibition of chemokine receptor CXCR4 by small molecule antagonists
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Biology and clinical relevance of chemokines and chemokine receptors CXCR4 and CCR5 in human diseases
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Development of a Unique Small Molecule Modulator of CXCR4
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Recent patents regarding the discovery of small molecule CXCR4antagonists
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Academia–industry partnerships in drug discovery
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CXCR4 Tropic HIV-1 gp120 Inhibition of SDF-1α-Induced Chemotaxis Requires Lck and is Associated with Cofilin Phosphorylation~!2010-04-23~!2010-05-24~!2010-06-23~!
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Incoming claims: where this work appears in other papers’ reference lists and arguments.
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