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Combining 4D Pharmacophore Generation and Multidimensional QSAR: Modeling Ligand Binding to the Bradykinin B2Receptor

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/1097-0134(20000901)40:4<623::aid-prot70>3.0.co;2-iopenalex-snapshot
Similarity-driven flexible ligand docking
inferredcites →https://doi.org/10.1002/9783527618279.ch44eopenalex-snapshot
3D‐ andnD‐QSAR Methods
inferredcites →https://doi.org/10.1002/jcc.10258openalex-snapshot
TGSA‐Flex: Extending the capabilities of the Topo‐Geometrical superposition algorithm to handle flexible molecules
inferredcites →https://doi.org/10.1002/jcc.540110405openalex-snapshot
Macromodel—an integrated software system for modeling organic and bioorganic molecules using molecular mechanics
inferredcites →https://doi.org/10.1002/med.2610100204openalex-snapshot
Bradykinin receptor antagonists
inferredcites →https://doi.org/10.1007/bf00119865openalex-snapshot
FLOG: A system to select ?quasi-flexible? ligands complementary to a receptor of known three-dimensional structure
inferredcites →https://doi.org/10.1007/bf00126219openalex-snapshot
AM1-SM2 and PM3-SM3 parameterized SCF solvation models for free energies in aqueous solution
inferredcites →https://doi.org/10.1016/0166-2236(93)90134-8openalex-snapshot
Neuron atrophy during aging: programmed or sporadic?
inferredcites →https://doi.org/10.1016/0306-3623(83)90001-0openalex-snapshot
Pharmacology of kinins: Their relevance to tissue injury and inflammation
inferredcites →https://doi.org/10.1016/s0021-9258(17)31844-6openalex-snapshot
Expression cloning of a human B1 bradykinin receptor.
inferredcites →https://doi.org/10.1016/s1093-3263(01)00110-3openalex-snapshot
Automatic generation of alignments for 3D QSAR analyses
inferredcites →https://doi.org/10.1021/ci034027oopenalex-snapshot
FLUFF-BALL, A Template-Based Grid-Independent Superposition and QSAR Technique: Validation Using a Benchmark Steroid Data Set
inferredcites →https://doi.org/10.1021/ci980044fopenalex-snapshot
A Method for Visualizing Recurrent Topological Substructures in Sets of Active Molecules
inferredcites →https://doi.org/10.1021/ja00168a021openalex-snapshot
A new force field for modeling metalloproteins
inferredcites →https://doi.org/10.1021/ja00315a052openalex-snapshot
Biosynthetic origin of the carbon skeleton and oxygen atoms of nargenicin A1
inferredcites →https://doi.org/10.1021/jm0002634openalex-snapshot
Flexible Alignment of Small Molecules
inferredcites →https://doi.org/10.1021/jm00050a010openalex-snapshot
Molecular Similarity Indices in a Comparative Analysis (CoMSIA) of Drug Molecules to Correlate and Predict Their Biological Activity
inferredcites →https://doi.org/10.1021/jm000986nopenalex-snapshot
Multiple-Conformation and Protonation-State Representation in 4D-QSAR: The Neurokinin-1 Receptor System
inferredcites →https://doi.org/10.1021/jm011005popenalex-snapshot
5D-QSAR: The Key for Simulating Induced Fit?
inferredcites →https://doi.org/10.1021/jm049123aopenalex-snapshot
BRUTUS: Optimization of a Grid-Based Similarity Function for Rigid-Body Molecular Superposition. 1. Alignment and Virtual Screening Applications
inferredcites →https://doi.org/10.1021/jm970732aopenalex-snapshot
Three-Dimensional Quantitative Similarity−Activity Relationships (3D QSiAR) from SEAL Similarity Matrices
inferredcites →https://doi.org/10.1021/jm981037lopenalex-snapshot
F lex S: A Method for Fast Flexible Ligand Superposition
inferredcites →https://doi.org/10.1023/a:1008194019144openalex-snapshot
Computational methods for the structural alignment of molecules
inferredcites →https://doi.org/10.1023/a:1011921423829openalex-snapshot
FLASHFLOOD: A 3D Field-based similarity search and alignment method for flexible molecules
inferredcites →https://doi.org/10.1023/a:1024503712135openalex-snapshot
Fast 3D molecular superposition and similarity search in databases of flexible molecules
inferredcites →https://doi.org/10.1073/pnas.88.17.7724openalex-snapshot
Expression cloning of a rat B2 bradykinin receptor.
inferredcites →https://doi.org/10.1107/s0567739476001873openalex-snapshot
A solution for the best rotation to relate two sets of vectors
inferredcites →https://doi.org/10.1107/s0567739476001885openalex-snapshot
A comment on the close-packing of hyperspheres
inferredcites →https://doi.org/10.1111/j.1365-2133.1988.tb03245.xopenalex-snapshot
Inflammation and mediators
inferredcites →https://doi.org/10.1146/annurev.iy.06.040188.000405openalex-snapshot
Kinin Formation: Mechanisms and Role in Inflammatory Disorders

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1002/biot.200700259openalex-snapshot
Computational chemistry approaches to drug discovery in signal transduction
inferred← citeshttps://doi.org/10.1002/chin.200649225openalex-snapshot
Combining 4D Pharmacophore Generation and Multidimensional QSAR: Modeling Ligand Binding to the Bradykinin B2 Receptor.
inferred← citeshttps://doi.org/10.1002/cmdc.200600212openalex-snapshot
Simulating α/β Selectivity at the Human Thyroid Hormone Receptor: Consensus Scoring Using Multidimensional QSAR
inferred← citeshttps://doi.org/10.1007/s00894-008-0373-1openalex-snapshot
Receptor independent and receptor dependent CoMSA modeling with IVE-PLS: application to CBG benchmark steroids and reductase activators
inferred← citeshttps://doi.org/10.1016/b978-0-12-374194-3.00028-7openalex-snapshot
Pharmacophore Identification and Pseudo-Receptor Modeling
inferred← citeshttps://doi.org/10.1016/b978-0-12-417205-0.00021-3openalex-snapshot
Pharmacophore Identification and Pseudo-Receptor Modeling
inferred← citeshttps://doi.org/10.1016/j.drudis.2007.08.004openalex-snapshot
Multi-dimensional QSAR in drug discovery
inferred← citeshttps://doi.org/10.1016/j.ejmech.2010.06.007openalex-snapshot
Pharmacophore identification and bioactivity prediction for triaminotriazine derivatives by electron conformational-genetic algorithm QSAR method
inferred← citeshttps://doi.org/10.1021/acs.jcim.8b00757openalex-snapshot
Conservation and Relevance of Pharmacophore Point Types
inferred← citeshttps://doi.org/10.1080/1062936x.2012.665082openalex-snapshot
4D-QSAR study of HEPT derivatives by electron conformational–genetic algorithm method
inferred← citeshttps://doi.org/10.1134/s1070363210120248openalex-snapshot
Computational methods and software in computer-aided combinatorial library design
inferred← citeshttps://doi.org/10.1142/9789812778789_0020openalex-snapshot
Structure-based Computational Pharmacology and Toxicology
inferred← citeshttps://doi.org/10.1371/journal.pcbi.1000594openalex-snapshot
Challenges Predicting Ligand-Receptor Interactions of Promiscuous Proteins: The Nuclear Receptor PXR
inferred← citeshttps://doi.org/10.2174/092986709788803286openalex-snapshot
Receptor Dependent Multidimensional QSAR for Modeling Drug - Receptor Interactions
inferred← citeshttps://doi.org/10.2174/157018009789353464openalex-snapshot
QSAR Study of Androstenedione Analogs as Aromatase Inhibitors
inferred← citeshttps://doi.org/10.2174/1573409911666150414145937openalex-snapshot
Antiprotozoal Nitazoxanide Derivatives: Synthesis, Bioassays and QSAR Study Combined with Docking for Mechanistic Insight
inferred← citeshttps://doi.org/10.4155/fmc.11.18openalex-snapshot
Integrating Structure-Based and Ligand-Based Approaches for Computational Drug Design
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