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Multiple Flexible Alignment with SEAL: A Study of Molecules Acting on the Colchicine Binding Site

https://doi.org/10.1021/ci9900682
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/(sici)1096-987x(19970415)18:5<638::aid-jcc5>3.0.co;2-oopenalex-snapshot
Superposition of molecules: Electron density fitting by application of fourier transforms
inferredcites →https://doi.org/10.1002/med.2610080105openalex-snapshot
Colchicine and its analogues: Recent findings
inferredcites →https://doi.org/10.1007/bf00124324openalex-snapshot
A genetic algorithm for flexible molecular overlay and pharmacophore elucidation
inferredcites →https://doi.org/10.1007/bf00141577openalex-snapshot
A fast new approach to pharmacophore mapping and its application to dopaminergic and benzodiazepine agonists
inferredcites →https://doi.org/10.1007/s002490050154openalex-snapshot
General features of the recognition by tubulin of colchicine and related compounds
inferredcites →https://doi.org/10.1016/0163-7258(91)90067-vopenalex-snapshot
Interactions of colchicine with tubulin
inferredcites →https://doi.org/10.1016/0898-5529(90)90162-2openalex-snapshot
An alternative method for the alignment of molecular structures: Maximizing electrostatic and steric overlap
inferredcites →https://doi.org/10.1016/0968-0896(95)00031-bopenalex-snapshot
Conformational changes of small molecules binding to proteins
inferredcites →https://doi.org/10.1021/ja00123a014openalex-snapshot
Design and Synthesis of a Transition State Analog for the Ene Reaction between Maleimide and 1-Alkenes
inferredcites →https://doi.org/10.1021/ja00194a034openalex-snapshot
A new approach to probing conformational space with molecular mechanics: random incremental pulse search
inferredcites →https://doi.org/10.1021/jm00061a014openalex-snapshot
Molecular shape comparison of angiotensin II receptor antagonists
inferredcites →https://doi.org/10.1021/jm00070a008openalex-snapshot
2-(Quinuclidin-3-yl)pyrido[4,3-b]indol-1-ones and isoquinolin-1-ones. Potent conformationally restricted 5-HT3 receptor antagonists
inferredcites →https://doi.org/10.1021/jm9700833openalex-snapshot
Synthesis of Analogs of 2-Methoxyestradiol with Enhanced Inhibitory Effects on Tubulin Polymerization and Cancer Cell Growth
inferredcites →https://doi.org/10.1021/jm970323eopenalex-snapshot
Synthesis and Structure−Activity Profiles of A-Homoestranes, the Estratropones
inferredcites →https://doi.org/10.1021/jm970732aopenalex-snapshot
Three-Dimensional Quantitative Similarity−Activity Relationships (3D QSiAR) from SEAL Similarity Matrices
inferredcites →https://doi.org/10.1021/jm9806143openalex-snapshot
SQ: A Program for Rapidly Producing Pharmacophorically Relevent Molecular Superpositions
inferredcites →https://doi.org/10.1023/a:1007959729800openalex-snapshot
Time-efficient flexible superposition of medium-sized molecules
inferredcites →https://doi.org/10.1023/a:1008055202136openalex-snapshot
Do active site conformations of small ligands correspond to low free-energy solution structures?
inferredcites →https://doi.org/10.1038/368237a0openalex-snapshot
The endogenous oestrogen metabolite 2-methoxyoestradiol inhibits angiogenesis and suppresses tumour growth
inferredcites →https://doi.org/10.1038/368239a0openalex-snapshot
Facial shape and judgements of female attractiveness

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.1002/chin.200025262openalex-snapshot
ChemInform Abstract: Multiple Flexible Alignment with SEAL: A Study of Molecules Acting on the Colchicine Binding Site.
inferred← citeshttps://doi.org/10.1002/wcms.1640openalex-snapshot
Small molecule superposition: A comprehensive overview on pose scoring of the latest methods
inferred← citeshttps://doi.org/10.1007/128_2008_20openalex-snapshot
Molecular Modeling Approaches to Study the Binding Mode on Tubulin of Microtubule Destabilizing and Stabilizing Agents
inferred← citeshttps://doi.org/10.1007/978-1-62703-059-5_1openalex-snapshot
Methods for Building QSARs
inferred← citeshttps://doi.org/10.1007/s10822-005-9005-3openalex-snapshot
Influence of conformation on the representation of small flexible molecules at low resolution: alignment of endothiapepsin ligands
inferred← citeshttps://doi.org/10.1016/j.abb.2015.01.012openalex-snapshot
Analysis of genetic polymorphism and biochemical characterization of a functionally decreased variant in prostacyclin synthase gene (CYP8A1) in humans
inferred← citeshttps://doi.org/10.1016/j.bmcl.2007.01.023openalex-snapshot
N-Phenyl-N′-(2-chloroethyl)urea analogues of combretastatin A-4: Is the N-phenyl-N′-(2-chloroethyl)urea pharmacophore mimicking the trimethoxy phenyl moiety?
inferred← citeshttps://doi.org/10.1021/ci030001lopenalex-snapshot
Novel Alignment Method of Small Molecules Using the Hopfield Neural Network
inferred← citeshttps://doi.org/10.1021/ci030005qopenalex-snapshot
Application of the Novel Molecular Alignment Method Using the Hopfield Neural Network to 3D-QSAR
inferred← citeshttps://doi.org/10.1021/ci3000369openalex-snapshot
MARS: Computing Three-Dimensional Alignments for Multiple Ligands Using Pairwise Similarities
inferred← citeshttps://doi.org/10.1021/ci6003338openalex-snapshot
QUASI: A Novel Method for Simultaneous Superposition of Multiple Flexible Ligands and Virtual Screening Using Partial Similarity
inferred← citeshttps://doi.org/10.1021/jm0002634openalex-snapshot
Flexible Alignment of Small Molecules
inferred← citeshttps://doi.org/10.1021/jm030520fopenalex-snapshot
Ligand-Based Structural Hypotheses for Virtual Screening
inferred← citeshttps://doi.org/10.1021/jm034007dopenalex-snapshot
Synthesis and Evaluation of a Novel Nonsteroidal-Specific Endothelial Cell Proliferation Inhibitor
inferred← citeshttps://doi.org/10.1023/a:1015941316283openalex-snapshot
Identifying potential binding modes and explaining partitioning behavior using flexible alignments and multidimensional scaling
inferred← citeshttps://doi.org/10.1038/s42003-025-08362-8openalex-snapshot
Estradiol pauses microtubule growth without increased incidence of catastrophe events
inferred← citeshttps://doi.org/10.1093/mutage/get039openalex-snapshot
Highly selective bioactivation of 1- and 2-hydroxy-3-methylcholanthrene to mutagens by individual human and other mammalian sulphotransferases expressed in Salmonella typhimurium
inferred← citeshttps://doi.org/10.1124/dmd.112.045583openalex-snapshot
Potent Inhibition of Human Sulfotransferase 1A1 by 17α-Ethinylestradiol: Role of 3′-Phosphoadenosine 5′-Phosphosulfate Binding and Structural Rearrangements in Regulating Inhibition and Activity
inferred← citeshttps://doi.org/10.1371/journal.pone.0118290openalex-snapshot
Discovery of Novel New Delhi Metallo-β-Lactamases-1 Inhibitors by Multistep Virtual Screening
inferred← citeshttps://doi.org/10.1515/hmbci.2010.012openalex-snapshot
Structural rearrangement of SULT2A1: effects on dehydroepiandrosterone and raloxifene sulfation
inferred← citeshttps://doi.org/10.2751/jcac.2.29openalex-snapshot
Novel alignment method of small molecules using Hopfield Neural Network
inferred← citeshttps://doi.org/10.2751/jcac.3.63openalex-snapshot
Application of novel molecular alignment method using Hopfield Neural Network to 3D-QSAR
inferred← citeshttps://doi.org/10.2751/jcac.3.99openalex-snapshot
Application of novel molecular alignment method using Hopfield Neural Network to 3D-QSAR
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