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Amino Acid Networks in a (β/α)8 Barrel Enzyme Change during Catalytic Turnover

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Evolution-Based Design of Proteins

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Allosteric regulation of substrate channeling and catalysis in the tryptophan synthase bienzyme complex

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Structures of wild-type and P28L/Y173F tryptophan synthase α-subunits from Escherichia coli

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Choreographing an enzyme's dance

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Network Analysis of Protein Structures Identifies Functional Residues

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Evaluation of Energetic and Dynamic Coupling Networks in a PDZ Domain Protein

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Long-Range Interactions in the Alpha Subunit of Tryptophan Synthase Help to Coordinate Ligand Binding, Catalysis, and Substrate Channeling

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Exchange of K+ or Cs+ for Na+ Induces Local and Long-Range Changes in the Three-Dimensional Structure of the Tryptophan Synthase α2β2 Complex

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Intrinsic dynamics of an enzyme underlies catalysis

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Dynamic activation of an allosteric regulatory protein

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The ensemble nature of allostery

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Allosteric regulation and catalysis emerge via a common route

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Automated identification of functional dynamic contact networks from X-ray crystallography

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Evolutionarily conserved networks of residues mediate allosteric communication in proteins

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Covariation of backbone motion throughout a small protein domain

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Dynamically driven protein allostery

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Linkage between dynamics and catalysis in a thermophilic-mesophilic enzyme pair

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NMR mapping of protein conformational landscapes using coordinated behavior of chemical shifts upon ligand binding

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Mapping allostery through the covariance analysis of NMR chemical shifts

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Allosteric pathways in imidazole glycerol phosphate synthase

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Signaling through dynamic linkers as revealed by PKA

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Propagating conformational changes over long (and short) distances in proteins

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Cryo-crystallography of a True Substrate, Indole-3-glycerol Phosphate, Bound to a Mutant (αD60N) Tryptophan Synthase α2β2 Complex Reveals the Correct Orientation of Active Site αGlu49

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Crystal Structures of a New Class of Allosteric Effectors Complexed to Tryptophan Synthase

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Conservation of Flexible Residue Clusters among Structural and Functional Enzyme Homologues

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SPACE: a suite of tools for protein structure prediction and analysis based on complementarity and environment

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Partial NMR assignments and secondary structure mapping of the isolated α subunit of Escherichia coli tryptophan synthase, a 29‐kD TIM barrel protein

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Steady‐State Kinetic Studies of the Synthesis of Indoleglycerol Phosphate Catalyzed by the α Subunit of Tryptophan Synthase from Escherichia coli

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The Role of Oligomerization and Cooperative Regulation in Protein Function: The Case of Tryptophan Synthase

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The Auto-Inhibitory Role of the EPAC Hinge Helix as Mapped by NMR

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Allosteric Coupling between the Intracellular Coupling Helix 4 and Regulatory Sites of the First Nucleotide-binding Domain of CFTR

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Disordered Proteins and Network Disorder in Network Descriptions of Protein Structure, Dynamics and Function: Hypotheses and a Comprehensive Review

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Coordinated Network Changes Across the Catalytic Cycle of Alpha Tryptophan Synthase

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Network of long‐range concerted chemical shift displacements upon ligand binding to human angiogenin

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Engineered control of enzyme structural dynamics and function

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Distinct conformational dynamics and allosteric networks in alpha tryptophan synthase during active catalysis

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Discovery of antimicrobial agent targeting tryptophan synthase

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Solution-state nuclear magnetic resonance studies of the Salmonella typhimurium tryptophan synthase complex

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Biophysical and computational methods to analyze amino acid interaction networks in proteins

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Study on a galactose decomposition strain of Lactiplantibacillus plantarum MWLp-4 from human milk: Safety evaluating and key genes analysis of potential probiotic function

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Leveraging Reciprocity to Identify and Characterize Unknown Allosteric Sites in Protein Tyrosine Phosphatases

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Allostery, engineering and inhibition of tryptophan synthase

inferred← citeshttps://doi.org/10.1016/j.str.2015.11.016openalex-snapshot

Uncoupling Catalytic and Binding Functions in the Cyclic AMP-Dependent Protein Kinase A

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Coordinated Network Changes across the Catalytic Cycle of Alpha Tryptophan Synthase

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Multiscale Modeling of Enzymatic Efficiency in Multienzyme Complex: Effect of Interenzyme Distance, Crowding Effect and Side Reactions

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Role of Conformational Dynamics in the Evolution of Retro-Aldolase Activity

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A Tool Set to Map Allosteric Networks through the NMR Chemical Shift Covariance Analysis

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The evolution of dynamic amino acid interaction networks around the catalytic cycle of α tryptophan synthase

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Visualizing the topology and re-analyzing the causes of small-world property of amino acid network

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Protein thermal denaturation is modulated by central residues in the protein structure network

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Millisecond Timescale Motions Connect Amino Acid Interaction Networks in Alpha Tryptophan Synthase

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Substitution of a Surface-Exposed Residue Involved in an Allosteric Network Enhances Tryptophan Synthase Function in Cells

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Investigation de la durabilité des structures protéiques et bio-inspiration pour les systèmes urbains

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