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Investigation into Small Molecule Isomeric Glucuronide Metabolite Differentiation Using In Silico and Experimental Collision Cross-Section Values

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/anie.201701309openalex-snapshot
Glycan Analysis by Ion Mobility–Mass Spectrometry
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Signal enhancement of glucuronide conjugates in LC‐MS/MS by derivatization with the phosphonium propylamine cation tris(trimethoxyphenyl) phosphonium propylamine, for forensic purposes
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Sodium adduct formation efficiency in ESI source
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Machine learning for quantum mechanics in a nutshell
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Applications of a travelling wave‐based radio‐frequency‐only stacked ring ion guide
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Differentiation of estriol glucuronide isomers by chemical derivatization and electrospray tandem mass spectrometry
inferredcites →https://doi.org/10.1002/rcm.5013openalex-snapshot
Enhancements in travelling wave ion mobility resolution
inferredcites →https://doi.org/10.1002/rcm.7981openalex-snapshot
Comparison of linear intrascan and interscan dynamic ranges of Orbitrap and ion‐mobility time‐of‐flight mass spectrometers
inferredcites →https://doi.org/10.1002/rcm.8371openalex-snapshot
Investigations into the performance of travelling wave enabled conventional and cyclic ion mobility systems to characterise protomers of fluoroquinolone antibiotic residues
inferredcites →https://doi.org/10.1002/rcm.8414openalex-snapshot
Separation of biologically relevant isomers on an Orbitrap mass spectrometer using high‐resolution drift tube ion mobility and varied drift gas mixtures
inferredcites →https://doi.org/10.1002/rcm.8928openalex-snapshot
An emerging powerful technique for distinguishing isomers: Trapped ion mobility spectrometry time‐of‐flight mass spectrometry for rapid characterization of estrogen isomers
inferredcites →https://doi.org/10.1007/s12127-016-0213-4openalex-snapshot
Ion mobility-mass spectrometry separation of steroid structural isomers and epimers
inferredcites →https://doi.org/10.1007/s12127-017-0227-6openalex-snapshot
Adduct-ion formation in trapped ion mobility spectrometry as a potential tool for studying molecular structures and conformations
inferredcites →https://doi.org/10.1007/s13361-011-0313-7openalex-snapshot
How Hot are Your Ions in TWAVE Ion Mobility Spectrometry?
inferredcites →https://doi.org/10.1007/s13361-017-1661-8openalex-snapshot
Benchmark Comparison for a Multi-Processing Ion Mobility Calculator in the Free Molecular Regime
inferredcites →https://doi.org/10.1007/s13361-017-1669-0openalex-snapshot
Collisional Cross-Sections with T-Wave Ion Mobility Spectrometry without Experimental Calibration
inferredcites →https://doi.org/10.1007/s13361-019-02272-wopenalex-snapshot
Ion Mobility Spectrometry and Tandem Mass Spectrometry Analysis of Estradiol Glucuronide Isomers
inferredcites →https://doi.org/10.1007/s13361-019-02310-7openalex-snapshot
Discrimination of Regioisomeric and Stereoisomeric Saponins from Aesculus hippocastanum Seeds by Ion Mobility Mass Spectrometry
inferredcites →https://doi.org/10.1016/j.aca.2016.04.020openalex-snapshot
Collision cross section prediction of deprotonated phenolics in a travelling-wave ion mobility spectrometer using molecular descriptors and chemometrics
inferredcites →https://doi.org/10.1016/j.aca.2021.338257openalex-snapshot
Ion mobility-high resolution mass spectrometry in anti-doping analysis. Part I: Implementation of a screening method with the assessment of a library of substances prohibited in sports
inferredcites →https://doi.org/10.1016/j.aca.2021.338270openalex-snapshot
Determination of drugs and drug metabolites by ion mobility-mass spectrometry: A review
inferredcites →https://doi.org/10.1016/j.acax.2019.100006openalex-snapshot
Potential of ion mobility-mass spectrometry for both targeted and non-targeted analysis of phase II steroid metabolites in urine
inferredcites →https://doi.org/10.1016/j.cbpa.2017.11.009openalex-snapshot
Recent advances in lipid separations and structural elucidation using mass spectrometry combined with ion mobility spectrometry, ion-molecule reactions and fragmentation approaches
inferredcites →https://doi.org/10.1016/j.chroma.2004.08.165openalex-snapshot
Structure elucidation of phase II metabolites by tandem mass spectrometry: an overview
inferredcites →https://doi.org/10.1016/j.chroma.2019.06.056openalex-snapshot
A comparison of collision cross section values obtained via travelling wave ion mobility-mass spectrometry and ultra high performance liquid chromatography-ion mobility-mass spectrometry: Application to the characterisation of metabolites in rat urine
inferredcites →https://doi.org/10.1016/j.ijms.2006.07.021openalex-snapshot
An investigation of the mobility separation of some peptide and protein ions using a new hybrid quadrupole/travelling wave IMS/oa-ToF instrument
inferredcites →https://doi.org/10.1016/j.mtcomm.2021.102226openalex-snapshot
Assessing collision cross section calculations using MobCal-MPI with a variety of commonly used computational methods
inferredcites →https://doi.org/10.1016/j.theochem.2006.12.048openalex-snapshot
Theoretical investigation on conformational behavior of 2,2′-bithiophene under the influence of external electric field at ab initio levels
inferredcites →https://doi.org/10.1021/ac012480yopenalex-snapshot
Peer Reviewed: Systematic LC/MS Metabolite Identification in Drug Discovery
inferredcites →https://doi.org/10.1021/ac1022953openalex-snapshot
Collision Cross Sections of Proteins and Their Complexes: A Calibration Framework and Database for Gas-Phase Structural Biology
inferredcites →https://doi.org/10.1021/ac500405xopenalex-snapshot
Ion Mobility Derived Collision Cross Sections to Support Metabolomics Applications
inferredcites →https://doi.org/10.1021/acs.analchem.0c04487openalex-snapshot
Use of Cyclic Ion Mobility Spectrometry (cIM)-Mass Spectrometry to Study the Intramolecular Transacylation of Diclofenac Acyl Glucuronide
inferredcites →https://doi.org/10.1021/acs.analchem.5b04068openalex-snapshot
Elucidation of Drug Metabolite Structural Isomers Using Molecular Modeling Coupled with Ion Mobility Mass Spectrometry
inferredcites →https://doi.org/10.1021/acs.analchem.6b03091openalex-snapshot
Large-Scale Prediction of Collision Cross-Section Values for Metabolites in Ion Mobility-Mass Spectrometry
inferredcites →https://doi.org/10.1021/acs.analchem.7b00741openalex-snapshot
Prediction of Collision Cross-Section Values for Small Molecules: Application to Pesticide Residue Analysis
inferredcites →https://doi.org/10.1021/acs.analchem.7b01709openalex-snapshot
Large-Scale Structural Characterization of Drug and Drug-Like Compounds by High-Throughput Ion Mobility-Mass Spectrometry
inferredcites →https://doi.org/10.1021/acs.analchem.7b01729openalex-snapshot
An Interlaboratory Evaluation of Drift Tube Ion Mobility–Mass Spectrometry Collision Cross Section Measurements
inferredcites →https://doi.org/10.1021/acs.analchem.7b02827openalex-snapshot
Correlating Resolving Power, Resolution, and Collision Cross Section: Unifying Cross-Platform Assessment of Separation Efficiency in Ion Mobility Spectrometry
inferredcites →https://doi.org/10.1021/acs.analchem.8b02083openalex-snapshot
Differentiating Isomeric Deprotonated Glucuronide Drug Metabolites via Ion/Molecule Reactions in Tandem Mass Spectrometry
inferredcites →https://doi.org/10.1021/acs.analchem.8b04567openalex-snapshot
ISiCLE: A Quantum Chemistry Pipeline for Establishing in Silico Collision Cross Section Libraries
inferredcites →https://doi.org/10.1021/acs.analchem.8b05821openalex-snapshot
Predicting Ion Mobility Collision Cross-Sections Using a Deep Neural Network: DeepCCS
inferredcites →https://doi.org/10.1021/acs.analchem.9b01838openalex-snapshot
A Cyclic Ion Mobility-Mass Spectrometry System
inferredcites →https://doi.org/10.1021/acs.analchem.9b03292openalex-snapshot
Characterization of the Impact of Drug Metabolism on the Gas-Phase Structures of Drugs Using Ion Mobility-Mass Spectrometry
inferredcites →https://doi.org/10.1021/acs.analchem.9b05772openalex-snapshot
Breaking Down Structural Diversity for Comprehensive Prediction of Ion-Neutral Collision Cross Sections
inferredcites →https://doi.org/10.1021/acs.jproteome.8b00567openalex-snapshot
Combining Mass Spectrometry and NMR Improves Metabolite Detection and Annotation
inferredcites →https://doi.org/10.1021/ci900508kopenalex-snapshot
LowModeMD—Implicit Low-Mode Velocity Filtering Applied to Conformational Search of Macrocycles and Protein Loops
inferredcites →https://doi.org/10.1021/jasms.0c00375openalex-snapshot
Application of Predicted Collisional Cross Section to Metabolome Databases to Probabilistically Describe the Current and Future Ion Mobility Mass Spectrometry
inferredcites →https://doi.org/10.1021/jo400858uopenalex-snapshot
Diastereoselective Synthesis of Tetrahydrofurans by Lewis Acid Catalyzed Intermolecular Carbenoid–Carbonyl Reaction–Cycloaddition Sequences: Unusual Diastereoselectivity of Lewis Acid Catalyzed Cycloadditions
inferredcites →https://doi.org/10.1021/jp066953mopenalex-snapshot
Optimization of Algorithms for Ion Mobility Calculations
inferredcites →https://doi.org/10.1038/nature15388openalex-snapshot
Identification of carbohydrate anomers using ion mobility–mass spectrometry
inferredcites →https://doi.org/10.1039/c4sc00443dopenalex-snapshot
Enantiomeric differentiation of aromatic amino acids using traveling wave ion mobility-mass spectrometry
inferredcites →https://doi.org/10.1039/c5an02062jopenalex-snapshot
Uncovering biologically significant lipid isomers with liquid chromatography, ion mobility spectrometry and mass spectrometry
inferredcites →https://doi.org/10.1039/c5an02456kopenalex-snapshot
Combining density functional theory (DFT) and collision cross-section (CCS) calculations to analyze the gas-phase behaviour of small molecules and their protonation site isomers
inferredcites →https://doi.org/10.1039/c8an02150copenalex-snapshot
A parallelized molecular collision cross section package with optimized accuracy and efficiency
inferredcites →https://doi.org/10.1039/c8fd00180dopenalex-snapshot
Combining ultra-high resolution ion mobility spectrometry with cryogenic IR spectroscopy for the study of biomolecular ions
inferredcites →https://doi.org/10.1063/1.4901890openalex-snapshot
Collision cross section calculations for polyatomic ions considering rotating diatomic/linear gas molecules
inferredcites →https://doi.org/10.1080/17425255.2017.1351944openalex-snapshot
Metabolite profiling in early clinical drug development: current status and future prospects
inferredcites →https://doi.org/10.1124/dmd.104.000794openalex-snapshot
DRUG-DRUG INTERACTIONS FOR UDP-GLUCURONOSYLTRANSFERASE SUBSTRATES: A PHARMACOKINETIC EXPLANATION FOR TYPICALLY OBSERVED LOW EXPOSURE (AUCI/AUC) RATIOS
inferredcites →https://doi.org/10.1124/dmd.113.051953openalex-snapshot
Ion Mobility Spectrometry–Mass Spectrometry Analysis for the Site of Aromatic Hydroxylation
inferredcites →https://doi.org/10.1186/1758-2946-3-33openalex-snapshot
Open Babel: An open chemical toolbox
inferredcites →https://doi.org/10.1255/ejms.947openalex-snapshot
Deciphering Drift Time Measurements from Travelling Wave Ion Mobility Spectrometry-Mass Spectrometry Studies
inferredcites →https://doi.org/10.1351/pac-rec-06-04-06openalex-snapshot
Definitions of terms relating to mass spectrometry (IUPAC Recommendations 2013)
inferredcites →https://doi.org/10.3390/ijms18010183openalex-snapshot
Lipid and Glycolipid Isomer Analyses Using Ultra-High Resolution Ion Mobility Spectrometry Separations
inferredcites →https://doi.org/10.4155/bio-2020-0055openalex-snapshot
Challenges and Recommendations in Developing LC–MS/MS Bioanalytical Assays of Labile Glucuronides and Parent Compounds in the Presence of Glucuronide Metabolites

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Collision cross section measurement and prediction methods in omics
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Potential of measured relative shifts in collision cross section values for biotransformation studies
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Collision cross-section as a universal molecular descriptor in the analysis of PFAS and use of ion mobility spectrum filtering for improved analytical sensitivities
inferred← citeshttps://doi.org/10.1016/j.chroma.2023.464597openalex-snapshot
The rapid separation and characterization of sulfates of tyrosine and its metabolites in reaction mixtures and human urine using a cyclic ion mobility device and mass spectrometry
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A library of experimental collision cross sections for food, beverage and plant metabolites generated by reversed-phase liquid chromatography coupled to travelling-wave ion mobility and high-resolution mass spectrometry
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Mass spectrometry‑based chemoproteomics for modern drug screening: A critical review and the 3M framework (Match–Map–Mine)
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Integration of machine learning-predicted collision cross sections for the discrimination of flavonol 3-O- and 7-O-glycoside isomers
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Study on the correlation and difference of qualitative information among three types of UPLC-HRMS and potential generalization in metabolites annotation
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Measurement of very low-molecular weight metabolites by traveling wave ion mobility and its use in human urine samples
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Predicting Ion Mobility Collision Cross Sections and Assessing Prediction Variation by Combining Conventional and Data Driven Modeling
inferred← citeshttps://doi.org/10.1021/acs.analchem.5c02370openalex-snapshot
Identification of Isomeric Metabolites Using Cold Ion Spectroscopy Add-on to Orbitrap-Based Mass Spectrometer
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Application of Ion Mobility Spectrometry and the Derived Collision Cross Section in the Analysis of Environmental Organic Micropollutants
inferred← citeshttps://doi.org/10.1021/acs.jafc.2c00724openalex-snapshot
A Collision Cross Section Database for Extractables and Leachables from Food Contact Materials
inferred← citeshttps://doi.org/10.1021/acsestwater.5c00150openalex-snapshot
Data-Driven Collision Cross Section Library for Structural Analysis and Identification of Expanded Polystyrene Buoy Photodegradation Products in Aquaculture
inferred← citeshttps://doi.org/10.1021/jasms.6c00160openalex-snapshot
T-ReXing Synthetic Cannabinoids─Unveiling Metabolite Features Suitable for Urine Screening by Trapped Ion Mobility HRMS
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Insights and prospects for ion mobility-mass spectrometry in clinical chemistry
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Two-dimensional liquid chromatography and ion mobility-mass spectrometry for the multicomponent characterization of different parts of the medicinal plant Gynostemma longipes
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Collision Cross Section Prediction Based on Machine Learning
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