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Thermodynamic Study of Rhodamine 123-Calf Thymus DNA Interaction: Determination of Calorimetric Enthalpy by Optical Melting Study

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Energetics of drug–DNA interactions

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Statistical thermodynamics of nucleic acid melting transitions with coupled binding equilibria

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AutoDock Vina: Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading

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Species‐specific differences in the toxicity of rhodamine 123 toward cultured mammalian cells

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Therapeutic potential of nucleic acid‐binding isoquinoline alkaloids: Binding aspects and implications for drug design

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Ligand docking and binding site analysis with PyMOL and Autodock/Vina

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Rhodamine 123 as a probe of transmembrane potential in isolated rat-liver mitochondria: spectral and metabolic properties

inferredcites →https://doi.org/10.1016/0022-2836(89)90608-6openalex-snapshot

Role of the hydrophobic effect in stability of site-specific protein-DNA complexes

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A molecular thermodynamic view of DNA–drug interactions: a case study of 25 minor-groove binders

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A thermodynamic signature for drug–DNA binding mode

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Small molecule–RNA interaction: Spectroscopic and calorimetric studies on the binding by the cytotoxic protoberberine alkaloid coralyne to single stranded polyribonucleotides

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RNA binding small molecules: Studies on t-RNA binding by cytotoxic plant alkaloids berberine, palmatine and the comparison to ethidium

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Cancer Epigenetics: From Mechanism to Therapy

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Binding of DNA with Rhodamine B: Spectroscopic and molecular modeling studies

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Thermodynamics of the DNA binding of biogenic polyamines: Calorimetric and spectroscopic investigations

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Binding of alkaloid harmalol to DNA: Photophysical and calorimetric approach

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Binding of DNA-binding alkaloids berberine and palmatine to tRNA and comparison to ethidium: Spectroscopic and molecular modeling studies

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Thermodynamics of drug–DNA interactions

inferredcites →https://doi.org/10.1016/s0006-3495(04)74178-8openalex-snapshot

Characterization of a Novel DNA Minor-Groove Complex

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DNA melting investigated by differential scanning calorimetry and Raman spectroscopy

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Molecular recognition of DNA by small molecules

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Nonsequence-specific DNA recognition: a structural perspective

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Structural and Thermodynamic Strategies for Site-Specific DNA Binding Proteins

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Selective Interactions Between 5-fluorouracil Prodrug Enantiomers and DNA Investigated with Voltammetry and Molecular Docking Simulation

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Thermodynamic analysis of ion effects on the binding and conformational equilibria of proteins and nucleic acids: the roles of ion association or release, screening, and ion effects on water activity

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Impedance Sensing of DNA Binding Drugs Using Gold Substrates Modified with Gold Nanoparticles

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Validation of Molecular Docking Programs for Virtual Screening against Dihydropteroate Synthase

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Binding Interaction of Cationic Phenazinium Dyes with Calf Thymus DNA: A Comparative Study

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Spectroscopic and Calorimetric Studies on the Binding of Alkaloids Berberine, Palmatine and Coralyne to Double Stranded RNA Polynucleotides

inferredcites →https://doi.org/10.1021/nl901691vopenalex-snapshot

DNA Profiling Using Solid-State Nanopores: Detection of DNA-Binding Molecules

inferredcites →https://doi.org/10.1023/a:1025096930604openalex-snapshot

Rhodamine 123 Requires Carrier-Mediated Influx for Its Activity as a P-Glycoprotein Substrate in Caco-2 Cells

inferredcites →https://doi.org/10.1039/c0md00209gopenalex-snapshot

Binding of 9-O-(ω-amino) alkyl ether analogues of the plant alkaloid berberine to poly(A): insights into self-structure induction

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Cytotoxicity and cellular impact of dinuclear organoiridium DNA intercalators and nucleases with long rigid bridging ligands

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Mechanism of recognition of compounds of diverse structures by the multidrug efflux pump AcrB of Escherichia coli

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Antitumor activity of a pyrrole-imidazole polyamide

inferredcites →https://doi.org/10.1073/pnas.77.2.990openalex-snapshot

Localization of mitochondria in living cells with rhodamine 123.

inferredcites →https://doi.org/10.1089/dna.2010.1109openalex-snapshot

Enhanced DNA Binding of 9-ω-Amino Alkyl Ether Analogs from the Plant Alkaloid Berberine

inferredcites →https://doi.org/10.1093/nar/gkf558openalex-snapshot

Thermodynamic characterization of the multivalent binding of chartreusin to DNA

inferredcites →https://doi.org/10.1093/nar/gkg826openalex-snapshot

Energetics of echinomycin binding to DNA

inferredcites →https://doi.org/10.1126/science.7146897openalex-snapshot

Rhodamine-123 Selectively Reduces Clonal Growth of Carcinoma Cells in Vitro

inferredcites →https://doi.org/10.1201/b10501openalex-snapshot

Handbook of Biochemistry and Molecular Biology

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A Novel Histone Deacetylase Inhibitor Exhibits Antitumor Activity via Apoptosis Induction, F-Actin Disruption and Gene Acetylation in Lung Cancer

inferredcites →https://doi.org/10.1371/journal.pone.0093913openalex-snapshot

Interaction of 6 Mercaptopurine with Calf Thymus DNA – Deciphering the Binding Mode and Photoinduced DNA Damage

inferredcites →https://doi.org/10.2174/0929867054546564openalex-snapshot

Differential Scanning Calorimetry in Life Science: Thermodynamics, Stability, Molecular Recognition and Application in Drug Design

inferredcites →https://doi.org/10.2174/156802609787521616openalex-snapshot

Implications of the Dominant Role of Transporters in Drug Uptake by Cells (Supplementary Material)

inferredcites →https://doi.org/10.3109/1061186x.2010.536983openalex-snapshot

Surface modification of liposomes with rhodamine-123-conjugated polymer results in enhanced mitochondrial targeting

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Unexpected Syntheses of seco-Cyclopropyltetrahydroquinolines >From a Radical 5-Exo-Trig Cyclization Reaction: Analogs of CC-1065 and the Duocarmycins

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