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Coil–Globule–Coil Transition of PNIPAm in Aqueous Methanol: Coupling All-Atom Simulations to Semi-Grand Canonical Coarse-Grained Reservoir

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/jcc.10307openalex-snapshot
Deriving effective mesoscale potentials from atomistic simulations
inferredcites →https://doi.org/10.1002/polb.23194openalex-snapshot
Temperature dependent phase behavior of PNIPAM microgels in mixed water/methanol solvents
inferredcites →https://doi.org/10.1007/s008940100045openalex-snapshot
GROMACS 3.0: a package for molecular simulation and trajectory analysis
inferredcites →https://doi.org/10.1007/s10955-011-0312-xopenalex-snapshot
Statistical Physics Problems in Adaptive Resolution Computer Simulations of Complex Fluids
inferredcites →https://doi.org/10.1016/0010-4655(94)90210-0openalex-snapshot
An algorithm for the semi-grand-canonical simulation of asymmetric polymer mixtures
inferredcites →https://doi.org/10.1016/0263-7855(96)00018-5openalex-snapshot
VMD: Visual molecular dynamics
inferredcites →https://doi.org/10.1021/bi9020082openalex-snapshot
Preferential Interactions between Small Solutes and the Protein Backbone: A Computational Analysis
inferredcites →https://doi.org/10.1021/ct200706fopenalex-snapshot
Structure Formation of Toluene around C60: Implementation of the Adaptive Resolution Scheme (AdResS) into GROMACS
inferredcites →https://doi.org/10.1021/ct200709hopenalex-snapshot
Kirkwood–Buff Analysis of Liquid Mixtures in an Open Boundary Simulation
inferredcites →https://doi.org/10.1021/ct300253nopenalex-snapshot
Preferential Solvation of Triglycine in Aqueous Urea: An Open Boundary Simulation Approach
inferredcites →https://doi.org/10.1021/ct900369wopenalex-snapshot
Versatile Object-Oriented Toolkit for Coarse-Graining Applications
inferredcites →https://doi.org/10.1021/j100308a038openalex-snapshot
The missing term in effective pair potentials
inferredcites →https://doi.org/10.1021/ja202849aopenalex-snapshot
Effect of Urea on the β-Hairpin Conformational Ensemble and Protein Denaturation Mechanism
inferredcites →https://doi.org/10.1021/jp105160aopenalex-snapshot
Comment on “Urea-Mediated Protein Denaturation: A Consensus View”
inferredcites →https://doi.org/10.1021/jp212357nopenalex-snapshot
Molecular Dynamics and Experimental Study of Conformation Change of Poly( N -isopropylacrylamide) Hydrogels in Mixtures of Water and Methanol
inferredcites →https://doi.org/10.1021/jz301992uopenalex-snapshot
Kirkwood–Buff Integrals for Finite Volumes
inferredcites →https://doi.org/10.1021/ma00004a022openalex-snapshot
Cononsolvency in mixed aqueous solutions of poly(N-isopropylacrylamide)
inferredcites →https://doi.org/10.1021/ma00007a017openalex-snapshot
Coil-globule type transitions in polymers. 2. Theory of coil-globule transition in linear macromolecules
inferredcites →https://doi.org/10.1021/ma300729zopenalex-snapshot
Study of the Polymer Length Dependence of the Single Chain Transition Temperature in Syndiotactic Poly(N-isopropylacrylamide) Oligomers in Water
inferredcites →https://doi.org/10.1021/ma401665hopenalex-snapshot
Co-Nonsolvency of Poly( n -isopropylacrylamide) in Deuterated Water/Ethanol Mixtures
inferredcites →https://doi.org/10.1021/ma971873popenalex-snapshot
Comparison of the Coil-to-Globule and the Globule-to-Coil Transitions of a Single Poly(N-isopropylacrylamide) Homopolymer Chain in Water
inferredcites →https://doi.org/10.1063/1.1748352openalex-snapshot
The Statistical Mechanical Theory of Solutions. I
inferredcites →https://doi.org/10.1063/1.2132286openalex-snapshot
Adaptive resolution molecular-dynamics simulation: Changing the degrees of freedom on the fly
inferredcites →https://doi.org/10.1063/1.2890729openalex-snapshot
Concurrent triple-scale simulation of molecular liquids
inferredcites →https://doi.org/10.1063/1.448118openalex-snapshot
Molecular dynamics with coupling to an external bath
inferredcites →https://doi.org/10.1073/pnas.0507053102openalex-snapshot
Predicting the energetics of osmolyte-induced protein folding/unfolding
inferredcites →https://doi.org/10.1073/pnas.0902904106openalex-snapshot
Cation specific binding with protein surface charges
inferredcites →https://doi.org/10.1073/pnas.0930122100openalex-snapshot
The molecular basis for the chemical denaturation of proteins by urea
inferredcites →https://doi.org/10.1073/pnas.1109372108openalex-snapshot
Quantifying why urea is a protein denaturant, whereas glycine betaine is a protein stabilizer
inferredcites →https://doi.org/10.1093/oso/9780199299690.001.0001openalex-snapshot
Molecular Theory of Solutions
inferredcites →https://doi.org/10.1103/physrevlett.108.170602openalex-snapshot
Adaptive resolution molecular dynamics simulation through coupling to an internal particle reservoir
inferredcites →https://doi.org/10.1103/physrevlett.110.108301openalex-snapshot
Hamiltonian Adaptive Resolution Simulation for Molecular Liquids
inferredcites →https://doi.org/10.1103/physrevlett.86.822openalex-snapshot
Reentrant Coil-to-Globule-to-Coil Transition of a Single Linear Homopolymer Chain in a Water / Methanol Mixture
inferredcites →https://doi.org/10.1146/annurev.physchem.59.032607.093707openalex-snapshot
Multiscale Simulation of Soft Matter: From Scale Bridging to Adaptive Resolution
inferredcites →https://doi.org/10.1371/journal.pcbi.1000221openalex-snapshot
Polar or Apolar—The Role of Polarity for Urea-Induced Protein Denaturation
inferredcites →https://doi.org/10.1529/biophysj.105.067330openalex-snapshot
Protein Folding, Stability, and Solvation Structure in Osmolyte Solutions

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Amphiphilic Polymer‐Based Fluorescent Probe for Enantioselective Recognition of Amino Acids in Immiscible Water and Organic Phases
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Spherically Symmetric Solvent is Sufficient to Explain the LCST Mechanism in Polymer Solutions
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Methanol‐induced change of the mechanism of the temperature‐ and pressure‐induced collapse of N‐Substituted acrylamide copolymers
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Solution Lithography for Colloidal Crystal Patterning: Revisiting Flory–Huggins Interaction Parameters and Co‐Nonsolvent Systems
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Positive Tie Line Slopes as Positive Evidence for the Preferential Interaction Mechanism in Poly(N-isopropylacrylamide) Co-nonsolvency
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Stimuli-responsive polymers: Fundamental considerations and applications
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Cononsolvency of poly-N-isopropyl acrylamide (PNIPAM): Microgels versus linear chains and macrogels
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Switching (bio-) adhesion and friction in liquid by stimulus responsive polymer coatings
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Adaptive shearing-gradient thickening polishing (AS-GTP) and subsurface damage inhibition
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Molecular description of the coil-to-globule transition of Poly(N-isopropylacrylamide) in water/ethanol mixture at low alcohol concentration
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Cononsolvency of mono- and di-alkyl N-substituted poly(acrylamide)s and poly(vinyl caprolactam)
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Tunable friction by employment of co-non-solvency of PNIPAM brushes
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Conformational transitions of poly(ethylene oxide) in supersonic jets of supercritical CO2
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Fundamentals and Effects of Biomimicking Stimuli-Responsive Polymers for Engineering Functions
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Extending Hamiltonian-Adaptive Resolution Simulation to Interfaces: An Updated LAMMPS Implementation and Application to Porous Solids
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Racemic Fluorescence Probe for Enantiomeric Excess Determination: Application of Cononsolvency of a Polymer in Sensing
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Mechanism of Polymer Collapse in Miscible Good Solvents
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Molecular Dynamics Simulations of Concentrated and Dilute Aqueous Solutions of Poly(N-Isopropylacrylamide) Using a Modified OPLS-AA Model
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Molecular Modeling of Water Interfaces: From Molecular Spectroscopy to Thermodynamics
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Relation Between Solvent Quality and Phase Behavior of Ternary Mixtures of Polymers and Two Solvents that Exhibit Cononsolvency
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Free Energy of Nanoparticle Binding to Multivalent Polymeric Substrates
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The Hydrophobic Effect and the Role of Cosolvents
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Transfer Free Energies and Partitioning of Small Molecules in Collapsed PNIPAM Polymers
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Improved Temperature Behavior of PNIPAM in Water with a Modified OPLS Model
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Combined Cononsolvency and Temperature Effects on Adsorbed PNIPAM Microgels
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Possible Way to Study Cononsolvency in Confinement: A Lattice Density Functional Theory Approach
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Polymer Brushes and Gels in Competing Solvents: The Role of Different Interactions and Quantitative Predictions for Poly(N-isopropylacrylamide) in Alcohol–Water Mixtures
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Co-Nonsolvency Effect in Solutions of Poly(methyl methacrylate)-b-poly(N-isopropylacrylamide) Diblock Copolymers in Water/Methanol Mixtures
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Solvation Behavior of Poly(sulfobetaine)-Based Diblock Copolymer Thin Films in Mixed Water/Methanol Vapors
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Co-nonsolvency Transition in Polymer Solutions: A Simulation Study
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Conformation Transition of a Homopolymer Chain in Binary Mixed Solvents
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General Condition for Polymer Cononsolvency in Binary Mixed Solvents
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Solution Properties of Amphiphilic Alternating Copolymers of N-Ethylmaleimide and 2-Hydroxyethyl Vinyl Ether: Thermoresponsiveness in Alcohols and Cosolvency Phenomenon in Binary Ethanol/Water Solutions
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Dimethylformamide-Mediated Polymer Microstructure Dictates the Extensional Rheology of Aqueous PNIPAM Solutions
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Smart Polymer Solution and Thermal Conductivity: How Important Is an Exact Polymer Conformation?
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Phase Separation of Homopolymers in Binary Mixed Solvents: the Co-Solvency Effect
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Hydrogen Bonding Mechanism in Cononsolvency
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Re-entrance of Poly(N,N-diethylacrylamide) in D2O/d-Ethanol Mixture at 27 °C
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Adsorption–Attraction Model for Co-Nonsolvency in Polymer Brushes
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Cosolute Partitioning in Polymer Networks: Effects of Flexibility and Volume Transitions
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Concentration Fluctuations near Lower Critical Solution Temperature in Ternary Aqueous Solutions
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Modeling and Simulations of Polymers: A Roadmap
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Co-Nonsolvency Response of a Polymer Brush: A Molecular Dynamics Study
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Does Preferential Adsorption Drive Cononsolvency?
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Tuning Morphology and Thermal Transport of Asymmetric Smart Polymer Blends by Macromolecular Engineering
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Co-Nonsolvency Transition of Poly( N -isopropylacrylamide) Brushes in a Series of Binary Mixtures
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Why Do Elastin-Like Polypeptides Possibly Have Different Solvation Behaviors in Water–Ethanol and Water–Urea Mixtures?
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Effect of Temperature on the Cononsolvency of Poly(N-isopropylacrylamide) (PNIPAM) in Aqueous 1-Propanol
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Stabilizing α-Helicity of a Polypeptide in Aqueous Urea: Dipole Orientation or Hydrogen Bonding?
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Poly(N-isopropylacrylamide) Microgels under Alcoholic Intoxication: When a LCST Polymer Shows Swelling with Increasing Temperature
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Direct Osmolyte–Macromolecule Interactions Confer Entropic Stability to Folded States
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Thermodynamic Description of Hofmeister Effects on the LCST of Thermosensitive Polymers
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Switchable Friction Using Contacts of Stimulus-Responsive and Nonresponding Swollen Polymer Brushes
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Friction in (Im-) Miscible Polymer Brush Systems and the Role of Transverse Polymer Tilting
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Cosolvency-Induced Switching of the Adhesion between Poly(methyl methacrylate) Brushes
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Polymer collapse in miscible good solvents is a generic phenomenon driven by preferential adsorption
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Depleted depletion drives polymer swelling in poor solvent mixtures
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A cosolvent surfactant mechanism affects polymer collapse in miscible good solvents
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On the urea induced hydrophobic collapse of a water soluble polymer
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Co-nonsolvency of PNiPAM at the transition between solvation mechanisms
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Why does high pressure destroy co-non-solvency of PNIPAm in aqueous methanol?
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Open boundary molecular dynamics of sheared star-polymer melts
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An alternative explanation of the cononsolvency of poly(N-isopropylacrylamide) in water–methanol solutions
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Stabilizing effect of TMAO on globular PNIPAM states: preferential attraction induces preferential hydration
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Pick up, move and release of nanoparticles utilizing co-non-solvency of PNIPAM brushes
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Cononsolvency in the ‘drunken’ state: the thermoresponsiveness of a new acrylamide copolymer in water–alcohol mixtures
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Relating side chain organization of PNIPAm with its conformation in aqueous methanol
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Reply to the ‘Comment on “Relating side chain organization of PNIPAm with its conformation in aqueous methanol”’ by N. van der Vegt and F. Rodriguez-Ropero, Soft Matter, 2017, 13 , DOI: 10.1039/C6SM02139E
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Statistical description of co-nonsolvency suppression at high pressures
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Reply to the ‘Comment on “Relating side chain organization of PNIPAm with its conformation in aqueous methanol”’ by A. Pica and G. Graziano, Soft Matter, 2017, 13 , DOI: 10.1039/C7SM01065F
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Molecular dynamics study of the LCST transition in aqueous poly( N-n -propylacrylamide)
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P-NIPAM in water–acetone mixtures: experiments and simulations
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Hydrogen bonding reinforcement as a strategy to improve upper critical solution temperature of poly( N -acryloylglycinamide- co -methacrylic acid)
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Studying polymer solutions with particle-based models linked to classical density functionals: co-non-solvency
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The role of osmolytes in the temperature-triggered conformational transition of poly( N -vinylcaprolactam): an experimental and computational study
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Modeling of stimuli-responsive nanoreactors: rational rate control towards the design of colloidal enzymes
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Many-chain effects on the co-nonsolvency of polymer brushes in a good solvent mixture
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A coil-to-globule transition capable coarse-grained model for poly( N -isopropylacrylamide)
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A unified understanding of the cononsolvency of polymers in binary solvent mixtures
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Cononsolvency of thermoresponsive polymers: where we are now and where we are going
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Role of interaction anisotropy in polymer cononsolvency: insights from the Flory–Huggins–Potts framework
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Sequence-defined phase behavior of poly( N -isopropylacrylamide- co -acrylamide) in water
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Co-non-solvency: Mean-field polymer theory does not describe polymer collapse transition in a mixture of two competing good solvents
inferred← citeshttps://doi.org/10.1063/1.4917200openalex-snapshot
Molecular dynamics simulations of solutions at constant chemical potential
inferred← citeshttps://doi.org/10.1063/1.4921347openalex-snapshot
Adaptive resolution simulation of a biomolecule and its hydration shell: Structural and dynamical properties
inferred← citeshttps://doi.org/10.1063/1.4923008openalex-snapshot
Adaptive resolution simulation of polarizable supramolecular coarse-grained water models
inferred← citeshttps://doi.org/10.1063/1.4932061openalex-snapshot
Communication: Cosolvency and cononsolvency explained in terms of a Flory-Huggins type theory
inferred← citeshttps://doi.org/10.1063/1.4947253openalex-snapshot
C –IBI: Targeting cumulative coordination within an iterative protocol to derive coarse-grained models of (multi-component) complex fluids
inferred← citeshttps://doi.org/10.1063/1.4959169openalex-snapshot
The relative entropy is fundamental to adaptive resolution simulations
inferred← citeshttps://doi.org/10.1063/1.4964779openalex-snapshot
Communication: Kirkwood-Buff integrals in the thermodynamic limit from small-sized molecular dynamics simulations
inferred← citeshttps://doi.org/10.1063/1.4972014openalex-snapshot
Adaptive resolution simulation of oligonucleotides
inferred← citeshttps://doi.org/10.1063/1.4974165openalex-snapshot
Effects of stereochemistry and copolymerization on the LCST of PNIPAm
inferred← citeshttps://doi.org/10.1063/1.4997638openalex-snapshot
Sequence transferable coarse-grained model of amphiphilic copolymers
inferred← citeshttps://doi.org/10.1063/1.5012838openalex-snapshot
Kosmotropic effect leads to LCST decrease in thermoresponsive polymer solutions
inferred← citeshttps://doi.org/10.1063/1.5143268openalex-snapshot
Open-boundary Hamiltonian adaptive resolution. From grand canonical to non-equilibrium molecular dynamics simulations
inferred← citeshttps://doi.org/10.1063/5.0046746openalex-snapshot
An interplay of excluded-volume and polymer–(co)solvent attractive interactions regulates polymer collapse in mixed solvents
inferred← citeshttps://doi.org/10.1063/5.0057065openalex-snapshot
Vapor sorption in binary polymer brushes: The effect of the polymer–polymer interface
inferred← citeshttps://doi.org/10.1063/5.0076744openalex-snapshot
Connecting density fluctuations and Kirkwood–Buff integrals for finite-size systems
inferred← citeshttps://doi.org/10.1063/5.0243895openalex-snapshot
Density fluctuations, solvation thermodynamics, and coexistence curves in grand canonical molecular dynamics simulations
inferred← citeshttps://doi.org/10.1063/5.0268339openalex-snapshot
Theoretical investigation on the conformation of polymer brushes in mixtures of binary solvents
inferred← citeshttps://doi.org/10.1063/5.0316628openalex-snapshot
Gluonic and regulatory solvents and another type of LCST-transition
inferred← citeshttps://doi.org/10.1063/5.0325441openalex-snapshot
Thermoresponsivity and cononsolvency of a minimal polymer model in mixed solvents
inferred← citeshttps://doi.org/10.1080/00268976.2018.1482429openalex-snapshot
Finite-size integral equations in the theory of liquids and the thermodynamic limit in computer simulations
inferred← citeshttps://doi.org/10.1088/1361-648x/aa9c77openalex-snapshot
Collapse in two good solvents, swelling in two poor solvents: defying the laws of polymer solubility?
inferred← citeshttps://doi.org/10.1088/1361-648x/aa9f56openalex-snapshot
Flory-type theories of polymer chains under different external stimuli
inferred← citeshttps://doi.org/10.1088/1361-648x/abed1dopenalex-snapshot
Density-functional-theory approach to the Hamiltonian adaptive resolution simulation method
inferred← citeshttps://doi.org/10.1088/1742-5468/2016/10/103211openalex-snapshot
On a new application of the path integrals in polymer statistical physics
inferred← citeshttps://doi.org/10.1088/1742-6596/2307/1/012042openalex-snapshot
Study of the molecular dynamics of p-NIPAM in electrolytic media
inferred← citeshttps://doi.org/10.1088/2053-1591/ac8d4eopenalex-snapshot
Design of acrylamide-based thermoresponsive copolymer with potential capability for physical network formation in water: a molecular dynamics study
inferred← citeshttps://doi.org/10.1098/rsfs.2018.0085openalex-snapshot
From quantum to subcellular scales: multi-scale simulation approaches and the SIRAH force field
inferred← citeshttps://doi.org/10.1103/physreve.94.023309openalex-snapshot
Simulation of macromolecular liquids with the adaptive resolution molecular dynamics technique
inferred← citeshttps://doi.org/10.1103/physrevmaterials.6.025606openalex-snapshot
Thermodynamics, morphology, mechanics, and thermal transport of PMMA-PLA blends
inferred← citeshttps://doi.org/10.1134/s181123821701009xopenalex-snapshot
How does poly(N-isopropylacrylamide) trigger phase separation in aqueous alcohol?
inferred← citeshttps://doi.org/10.1140/epjb/s10051-021-00193-wopenalex-snapshot
From adaptive resolution to molecular dynamics of open systems
inferred← citeshttps://doi.org/10.1140/epjst/e2015-02415-xopenalex-snapshot
Open boundary molecular dynamics
inferred← citeshttps://doi.org/10.1140/epjst/e2018-800171-yopenalex-snapshot
Studying equilibria of polymers in solution by direct molecular dynamics simulations: poly(N-isopropylacrylamide) in water as a test case
inferred← citeshttps://doi.org/10.1146/annurev-conmatphys-031119-050618openalex-snapshot
Smart Responsive Polymers: Fundamentals and Design Principles
inferred← citeshttps://doi.org/10.1209/0295-5075/108/30007openalex-snapshot
A unified framework for force-based and energy-based adaptive resolution simulations
inferred← citeshttps://doi.org/10.1209/0295-5075/114/46004openalex-snapshot
A statistical theory of coil-to-globule-to-coil transition of a polymer chain in a mixture of good solvents
inferred← citeshttps://doi.org/10.3390/e16084199openalex-snapshot
Computer Simulations of Soft Matter: Linking the Scales
inferred← citeshttps://doi.org/10.3390/e20040222openalex-snapshot
Fluctuations, Finite-Size Effects and the Thermodynamic Limit in Computer Simulations: Revisiting the Spatial Block Analysis Method
inferred← citeshttps://doi.org/10.3390/gels8100628openalex-snapshot
Frequency-Dependent Ultrasonic Stimulation of Poly(N-Isopropylacrylamide) Microgels in Water
inferred← citeshttps://doi.org/10.3390/ma11060991openalex-snapshot
Cononsolvency Transition of Polymer Brushes: A Combined Experimental and Theoretical Study
inferred← citeshttps://doi.org/10.3390/molecules31101657openalex-snapshot
Computational Insights into Selective Water–Methanol Transport in rGO/PSS Composite Films
inferred← citeshttps://doi.org/10.3390/polym10090978openalex-snapshot
Nanomechanics and Nanorheology of Microgels at Interfaces
inferred← citeshttps://doi.org/10.3390/polym15153229openalex-snapshot
Smart Polymers for Soft Materials: From Solution Processing to Organic Solids
inferred← citeshttps://doi.org/10.3390/polym9010016openalex-snapshot
A Review of Multiscale Computational Methods in Polymeric Materials
inferred← citeshttps://doi.org/10.3990/1.9789036549318openalex-snapshot
Multifunctional, complex polymers for functional and stimuli-responsive coatings
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How does Poly(N-isopropylacrylamide) Trigger Phase Separation in Aqueous Alcohol?1, "Высокомолекулярные соединения. Серия С"
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