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Mechanical limits to microbial activity in deep sediments

https://doi.org/10.1029/2006gc001355
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Pore distribution and permeability of silty clays
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Bacterial activity and production in near-surface estuarine and freshwater sediments
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Subsurface viruses and bacteria in Holocene/Late Pleistocene sediments of Saanich Inlet, BC: ODP Holes 1033B and 1034B, Leg 169S
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Variations in microbial community composition through two soil depth profiles
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Mechanical and petrophysical properties of North Sea shales
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Methanogen and bacterial diversity and distribution in deep gas hydrate sediments from the Cascadia Margin as revealed by 16S rRNA molecular analysis
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Geomicrobiology of deep, low organic carbon sediments in the Woodlark Basin, Pacific Ocean
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Influence of lithology and compaction on the pore size distribution and modelled permeability of some mudstones from the Norwegian margin
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Fabric, Pore Size Distribution, and Permeability of Sandy Soils
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Pore Sizes and Strength of Compacted Clay
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Pore Distribution and Permeability of Silty Clays
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Pore Size Distribution Studies
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Brownian Motors
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AGU Journals Online
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Distribution of aerobic bacteria, protozoa, algae, and fungi in deep subsurface sediments
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Pore‐size constraints on the activity and survival of subsurface bacteria in a late cretaceous shale‐sandstone sequence, northwestern New Mexico
inferredcites →https://doi.org/10.1080/01490459809378074openalex-snapshot
Grain size and depth constraints on microbial variability in coastal plain subsurface sediments
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Fundamentals of Soil Behavior
inferredcites →https://doi.org/10.1103/physrevlett.85.5246openalex-snapshot
Elasticity of the Rod-Shaped Gram-Negative Eubacteria
inferredcites →https://doi.org/10.1109/jstqe.2003.811284openalex-snapshot
Bacteria size determination by elastic light scattering
inferredcites →https://doi.org/10.1109/tnb.2003.820273openalex-snapshot
Mechanical property characterization of mouse zona pellucida
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MICRO‐FABRICS OF SHALES AND THEIR REARRANGEMENT BY COMPACTION
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Diversity of prokaryotes and methanogenesis in deep subsurface sediments from the Nankai Trough, Ocean Drilling Program Leg 190
inferredcites →https://doi.org/10.1111/j.1745-6584.1990.tb02266.xopenalex-snapshot
Survey of Microbial Populations in Buried‐Valley Aquifer Sediments from Northeastern Kansas
inferredcites →https://doi.org/10.1126/science.1101155openalex-snapshot
Distributions of Microbial Activities in Deep Subseafloor Sediments
inferredcites →https://doi.org/10.1128/aem.57.2.402-411.1991openalex-snapshot
Physiological Diversity and Distributions of Heterotrophic Bacteria in Deep Cretaceous Sediments of the Atlantic Coastal Plain
inferredcites →https://doi.org/10.1128/aem.61.6.2180-2185.1995openalex-snapshot
Total counts of marine bacteria include a large fraction of non-nucleoid-containing bacteria (ghosts)
inferredcites →https://doi.org/10.1128/aem.62.9.3405-3412.1996openalex-snapshot
Bacterial diversity in a deep-subsurface clay environment
inferredcites →https://doi.org/10.1128/aem.68.1.326-334.2002openalex-snapshot
Spatial and Resource Factors Influencing High Microbial Diversity in Soil
inferredcites →https://doi.org/10.1128/aem.70.3.1723-1734.2004openalex-snapshot
Microbial Diversity and Heterogeneity in Sandy Subsurface Soils
inferredcites →https://doi.org/10.1128/jb.173.1.197-203.1991openalex-snapshot
Mechanical properties of Bacillus subtilis cell walls: effects of removing residual culture medium
inferredcites →https://doi.org/10.1128/jb.173.1.204-210.1991openalex-snapshot
Mechanical properties of Bacillus subtilis cell walls: effects of ions and lysozyme
inferredcites →https://doi.org/10.1128/jb.181.22.6865-6875.1999openalex-snapshot
Thickness and Elasticity of Gram-Negative Murein Sacculi Measured by Atomic Force Microscopy
inferredcites →https://doi.org/10.1128/jb.184.7.1827-1831.2002openalex-snapshot
Force and Velocity of Mycoplasma mobile Gliding
inferredcites →https://doi.org/10.1139/cgj-38-4-741openalex-snapshot
Measurement and estimation of pore shrinkage and pore distribution in a clayey till during soil-water characteristic curve tests
inferredcites →https://doi.org/10.1139/t84-003openalex-snapshot
Study of the structure of a sensitive Champlain clay and of its evolution during consolidation
inferredcites →https://doi.org/10.1139/t90-090openalex-snapshot
Mercury intrusion and permeability of Louiseville clay
inferredcites →https://doi.org/10.1139/t96-030openalex-snapshot
Microstructure of a compacted silt
inferredcites →https://doi.org/10.1139/t99-121openalex-snapshot
Compressibility effect in evaluating the pore-size distribution of kaolin clay using mercury intrusion porosimetry
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Microstructure and Pore Structure of Impact-Compacted Clays
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Change in pore size distribution due to consolidation of clays
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On the micromechanics of crushable aggregates
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A discussion of the application of mercury intrusion porosimetry for the investigation of soils, including an evaluation of its use to estimate volume change in compacted clayey soils
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Microbial Life in the Soil, an Introduction
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Pore Size Distribution of Clayey Soils Measured by Mercury Intrusion Porosimetry and its Relation to Hydraulic Conductivity

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Hydraulic conductivity of compacted soils controlled by microbial activity
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Soil engineering in vivo : harnessing natural biogeochemical systems for sustainable, multi-functional engineering solutions
inferred← citeshttps://doi.org/10.1098/rsta.2014.0293openalex-snapshot
Physical and chemical controls on habitats for life in the deep subsurface beneath continents and ice
inferred← citeshttps://doi.org/10.1111/1462-2920.14607openalex-snapshot
Microbial diversity of an Antarctic subglacial community and high‐resolution replicate sampling inform hydrological connectivity in a polar desert
inferred← citeshttps://doi.org/10.1111/1574-6941.12269openalex-snapshot
Variability of subseafloor viral abundance at the geographically and geologically distinct continental margins
inferred← citeshttps://doi.org/10.1111/1755-6724.15274openalex-snapshot
The Influence of Microbial Community on Oil Reservoirs: A Case Study on the Mesozoic Natural Gas in the Pengyang Area, Southwestern Ordos Basin, China
inferred← citeshttps://doi.org/10.1111/gbi.12338openalex-snapshot
Holocene paleodepositional changes reflected in the sedimentary microbiome of the Black Sea
inferred← citeshttps://doi.org/10.1111/gbi.12391openalex-snapshot
Mineral‐hosted biofilm communities in the continental deep subsurface, Deep Mine Microbial Observatory, SD, USA
inferred← citeshttps://doi.org/10.1111/gcb.17239openalex-snapshot
The dual roles of dissimilatory iron reduction in the carbon cycle: The “iron mesh” effect can increase inorganic carbon sequestration
inferred← citeshttps://doi.org/10.1111/j.1462-2920.2008.01831.xopenalex-snapshot
Bacteria beneath the West Antarctic Ice Sheet
inferred← citeshttps://doi.org/10.1111/j.1574-6941.2007.00372.xopenalex-snapshot
Distribution of candidate division JS1 and other Bacteria in tidal sediments of the German Wadden Sea using targeted 16S rRNA gene PCR-DGGE
inferred← citeshttps://doi.org/10.1111/j.1574-6941.2009.00718.xopenalex-snapshot
Subseafloor microbial communities associated with rapid turbidite deposition in the Gulf of Mexico continental slope (IODP Expedition 308)
inferred← citeshttps://doi.org/10.1126/sciadv.adq0645openalex-snapshot
A global comparison of surface and subsurface microbiomes reveals large-scale biodiversity gradients, and a marine-terrestrial divide
inferred← citeshttps://doi.org/10.1126/science.1229296openalex-snapshot
Downsizing the Deep Biosphere
inferred← citeshttps://doi.org/10.1128/aem.01741-14openalex-snapshot
Microbial Community Stratification Controlled by the Subseafloor Fluid Flow and Geothermal Gradient at the Iheya North Hydrothermal Field in the Mid-Okinawa Trough (Integrated Ocean Drilling Program Expedition 331)
inferred← citeshttps://doi.org/10.1130/g30207.1openalex-snapshot
Milankovitch-scale correlations between deeply buried microbial populations and biogenic ooze lithology
inferred← citeshttps://doi.org/10.1139/cgj-2025-0881openalex-snapshot
In situ stabilization of soft clay with ground granulated blast-furnace slag and Terrazyme via deep soil mixing
inferred← citeshttps://doi.org/10.1142/s0218348x22501821openalex-snapshot
FRACTAL EVIDENCE OF REACTIVE TRANSPORT IN GEOLOGIC SYSTEMS BASED ON MULTIPHASE FLOW HYDRAULIC MODELS PART II: THE BIOGEOCHEMICAL ASPECT
inferred← citeshttps://doi.org/10.1144/qjegh2020-073openalex-snapshot
Electrokinetic-enhanced removal of toluene from physically heterogeneous granular porous media
inferred← citeshttps://doi.org/10.1144/qjegh2023-116openalex-snapshot
Natural attenuation of dissolved petroleum fuel constituents in a fractured Chalk aquifer: contaminant mass balance with probabilistic analysis
inferred← citeshttps://doi.org/10.1146/annurev-earth-042711-105500openalex-snapshot
The Deep, Dark Energy Biosphere: Intraterrestrial Life on Earth
inferred← citeshttps://doi.org/10.1146/annurev-marine-010814-015535openalex-snapshot
Slow Microbial Life in the Seabed
inferred← citeshttps://doi.org/10.1186/s40645-018-0217-2openalex-snapshot
Geophysical constraints on microbial biomass in subseafloor sediments and coal seams down to 2.5 km off Shimokita Peninsula, Japan
inferred← citeshttps://doi.org/10.1371/journal.pone.0085990openalex-snapshot
Linking Geology and Microbiology: Inactive Pockmarks Affect Sediment Microbial Community Structure
inferred← citeshttps://doi.org/10.1520/gtj20210026openalex-snapshot
Specific Surface Area by Colorimetry and Image Analysis
inferred← citeshttps://doi.org/10.1680/bcmpge.60531.014openalex-snapshot
Biogeochemical processes and geotechnical applications: progress, opportunities and challenges
inferred← citeshttps://doi.org/10.1680/geolett.11.00008openalex-snapshot
Bacteria in sediments: pore size effects
inferred← citeshttps://doi.org/10.1680/geot.sip13.p.017openalex-snapshot
Biogeochemical processes and geotechnical applications: progress, opportunities and challenges
inferred← citeshttps://doi.org/10.1680/jbibn.19.00002openalex-snapshot
Effects of biocementation on strength parameters of silty and clayey sands
inferred← citeshttps://doi.org/10.1680/jgeot.23.00039openalex-snapshot
Engineered bioclogging in sands: comparison of microbially induced and enzyme-induced biopolymer formation
inferred← citeshttps://doi.org/10.17271/23188472107720223099openalex-snapshot
Biocementation promoted by bacteria in concrete recovery and soil stabilization
inferred← citeshttps://doi.org/10.21083/978-1-77470-005-1openalex-snapshot
Groundwater Microbiology
inferred← citeshttps://doi.org/10.2113/gscpgbull.63.1.66openalex-snapshot
Lithological and diagenetic restrictions on biogenic gas generation in Songliao Basin inferred from grain size distribution and permeability measurement
inferred← citeshttps://doi.org/10.2134/jeq2006.0230openalex-snapshot
Impact of Basic Soil Parameters on Pesticide Disappearance Investigated by Multivariate Partial Least Square Regression and Statistics
inferred← citeshttps://doi.org/10.2139/ssrn.4835175openalex-snapshot
Strength Characteristics of Peat Stabilized with Eicp and Inorganic Binders
inferred← citeshttps://doi.org/10.2204/iodp.proc.331.105.2011openalex-snapshot
Site C0015
inferred← citeshttps://doi.org/10.2204/iodp.proc.331.107.2011openalex-snapshot
Site C0017
inferred← citeshttps://doi.org/10.25781/kaust-8hxjropenalex-snapshot
Significance of Microbiology in Porous Hydrocarbon Related Systems
inferred← citeshttps://doi.org/10.30955/gnj.003374openalex-snapshot
MICP-Reinforced Soil Under Three-Dimensional Grout Injection Condition
inferred← citeshttps://doi.org/10.3208/jgssp.chn-52openalex-snapshot
Long-term hydraulic conductivity of compacted clay permeated with landfill leachates
inferred← citeshttps://doi.org/10.3389/fmicb.2017.00763openalex-snapshot
Hydrocarbon Degradation in Caspian Sea Sediment Cores Subjected to Simulated Petroleum Seepage in a Newly Designed Sediment-Oil-Flow-Through System
inferred← citeshttps://doi.org/10.3389/fmicb.2022.1024630openalex-snapshot
Whether interstitial space features were the main factors affecting sediment microbial community structures in Chaohu Lake
inferred← citeshttps://doi.org/10.3389/fmicb.2022.921154openalex-snapshot
Preservation of exopolymeric substances in estuarine sediments
inferred← citeshttps://doi.org/10.3389/fnuen.2024.1404739openalex-snapshot
WP15 ConCorD state-of-the-art report (container corrosion under disposal conditions)
inferred← citeshttps://doi.org/10.3390/ijerph14030306openalex-snapshot
Microbial Remobilisation on Riverbed Sediment Disturbance in Experimental Flumes and a Human-Impacted River: Implication for Water Resource Management and Public Health in Developing Sub-Saharan African Countries
inferred← citeshttps://doi.org/10.3390/su151512048openalex-snapshot
Effect of Curing Condition and Solvent Content on Mechanical Properties of Zein-Biopolymer-Treated Soil
inferred← citeshttps://doi.org/10.4491/eer.2019.507openalex-snapshot
Evaluation of microbially Induced calcite precipitation (MICP) methods on different soil types for wind erosion control
inferred← citeshttps://doi.org/10.5194/bg-9-3491-2012openalex-snapshot
Sedimentological imprint on subseafloor microbial communities in Western Mediterranean Sea Quaternary sediments
inferred← citeshttps://doi.org/10.5571/synth.2021.3_1openalex-snapshot
Elucidation of methanogenic processes by subsurface microorganisms
inferred← citeshttps://doi.org/10.5772/16079openalex-snapshot
Hydraulic Conductivity and Landfill Construction
inferred← citeshttps://doi.org/10.70675/a5562120z2b24z4bcazb5eez9e1b6bed1a02openalex-snapshot
Mud generation from stratified sediments in a context of mud volcanism : the role of gas
inferred← citeshttps://doi.org/10.71548/10135openalex-snapshot
Characterizing Clay-Microbe-Metal Interactions: Implications for Metal Immobilization
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