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Time to model all life on Earth

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1016/j.ecolmodel.2003.09.003openalex-snapshot
Ecopath with Ecosim: methods, capabilities and limitations
inferredcites →https://doi.org/10.1111/j.1467-2979.2011.00412.xopenalex-snapshot
Lessons in modelling and management of marine ecosystems: the Atlantis experience
inferredcites →https://doi.org/10.1126/science.1225049openalex-snapshot
The Art of Ecological Modeling
inferredcites →https://doi.org/10.1371/journal.pbio.1001127openalex-snapshot
How Many Species Are There on Earth and in the Ocean?
inferredcites →https://doi.org/10.1890/03-9000openalex-snapshot
TOWARD A METABOLIC THEORY OF ECOLOGY

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Challenges and opportunities for Artificial Intelligence for predicting changes in ecological communities
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Runtime Verification and Refutation for Biological Systems
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Decline in Net Ecosystem Productivity Following Canopy Transition to Late-Succession Forests
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Connecting the Green and Brown Worlds
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Models of marine ecosystems
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Identifying trade-offs between ecosystem services, land use, and biodiversity: a plea for combining scenario analysis and optimization on different spatial scales
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What does policy-relevant global environmental knowledge do? The cases of climate and biodiversity
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How to model algal blooms in any lake on earth
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Modeling water quality in the Anthropocene: directions for the next-generation aquatic ecosystem models
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International collaboration and comparative research on ocean top predators under CLIOTOP
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Space sculpts time: Metacommunity risk and resilience
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Bridging the gap between ecosystem modeling tools and geographic information systems: Driving a food web model with external spatial–temporal data
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Systems ecology and environmentalism: Getting the science right. Part II: The Janus Enigma Hypothesis
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Modelling nonlinear responses of a desert rodent species to environmental change with hierarchical dynamic generalized additive models
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New insights to be gained from a Virtual Ecosystem
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Making spatial-temporal marine ecosystem modelling better – A perspective
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Knowing like a global expert organization: Comparative insights from the IPCC and IPBES
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Novel ecosystems: Governance and conservation in the age of the Anthropocene
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An integrative perspective on fish health: Environmental and anthropogenic pathways affecting fish stress
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Exploring the role of movement in determining the global distribution of marine biomass using a coupled hydrodynamic – Size-based ecosystem model
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Breaking new ground at the interface of dendroecology and mycology
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Towards Process-based Range Modeling of Many Species
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From Bacteria to Whales: Using Functional Size Spectra to Model Marine Ecosystems
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Digital twins: dynamic model-data fusion for ecology
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Novel community data in ecology-properties and prospects
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Potential feedbacks between loss of biosphere integrity and climate change
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Modelling genetics within ecosystems
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A call to forge biodiversity links
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Global change: Ecology must evolve
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Call for ecosystem modelling data
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Arctic ecosystem structure and functioning shaped by climate and herbivore body size
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A roadmap on ecosystem change
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Food-web stability signals critical transitions in temperate shallow lakes
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The megabiota are disproportionately important for biosphere functioning
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Climate change ‘heard’ in the ocean depths
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Macroevolutionary convergence connects morphological form to ecological function in birds
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A guide to ecosystem models and their environmental applications
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Towards an ecosystem model of infectious disease
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A digital twin for real-time biodiversity forecasting with citizen science data
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Seasonal difference in temporal transferability of an ecological model: near-term predictions of lemming outbreak abundances
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Integrating experimental and distribution data to predict future species patterns
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Non-linear changes in modelled terrestrial ecosystems subjected to perturbations
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Planetary Boundaries guide humanity’s future on Earth
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Optimal incentives for collective intelligence
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Developing a predictive science of the biosphere requires the integration of scientific cultures
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Individual incentives that promote collective intelligence
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Biodiversity and species extinction: categorisation, calculation, and communication
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Effects of the Emotion System on Adaptive Behavior
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Deciphering Diversity and Ecological Function From Marine Metagenomes
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A New Approach to Evaluate and Reduce Uncertainty of Model-Based Biodiversity Projections for Conservation Policy Formulation
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Leaps of Faith: How Implicit Assumptions Compromise the Utility of Ecosystem Models for Decision-making
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Big Data: Issues for an International Political Sociology of Data Practices: Table 1.
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Population Dynamics for Conservation
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Copyright Page
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Preface
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Glossary
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Philosophical approach to population modeling
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Simple population models
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Linear, age-structured models and their long-term dynamics
inferred← citeshttps://doi.org/10.1093/oso/9780198758365.003.0004openalex-snapshot
Age-structured models: Short-term transient dynamics
inferred← citeshttps://doi.org/10.1093/oso/9780198758365.003.0005openalex-snapshot
Size-structured models
inferred← citeshttps://doi.org/10.1093/oso/9780198758365.003.0006openalex-snapshot
Stage-structured models
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Age-structured models with density-dependent recruitment
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Age-structured models in a random environment
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Spatial population dynamics
inferred← citeshttps://doi.org/10.1093/oso/9780198758365.003.0010openalex-snapshot
Applications to conservation biology
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Population dynamics in marine conservation
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Thinking about populations
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Species Richness and Speciation Rates for all Terrestrial Animals Emerge from a Synthesis of Ecological Theories
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Species Distributions, Quantum Theory, and the Enhancement of Biodiversity Measures
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Predictive systems ecology
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Synergistic impacts of habitat loss and fragmentation on model ecosystems
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Silicon-based silicon–germanium–tin heterostructure photonics
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MetaConnect, a new platform for population viability modelling to assist decision makers in conservation and urban planning
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Food Webs: Insights from a General Ecosystem Model
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Modelling variation in bushmeat harvesting among seven African ecosystems using the Madingley Model: yield, survival and ecosystem impacts
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Mechanistic macroecology: exploring the drivers of latitudinal variation in terrestrial body size in a General Ecosystem Model
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ICT4ICTD: Computational Social Science for Digital Development
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REVIEW: Predictive ecology in a changing world
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Mycorrhizal symbioses influence the trophic structure of the Serengeti
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Exploiting the full potential of Bayesian networks in predictive ecology
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A working guide to spatial mechanistic modelling in Julia
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A calibration framework to improve mechanistic forecasts with hybrid dynamic models
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Shifts in ecosystem equilibria following trophic rewilding
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Mechanistic simulation models in macroecology and biogeography: state‐of‐art and prospects
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Animal culture impacts species' capacity to realise climate‐driven range shifts
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Temperature‐mediated changes in zooplankton body size: large scale temporal and spatial analysis
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Spatially explicit models for decision‐making in animal conservation and restoration
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Do marine planktonic ciliates follow Bergmann's rule?
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Experimentally testing and assessing the predictive power of species assembly rules for tropical canopy ants
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The ecological forecast horizon, and examples of its uses and determinants
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Foreseeing the future of mutualistic communities beyond collapse
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A bird in the hand: Global‐scale morphological trait datasets open new frontiers of ecology, evolution and ecosystem science
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Five fundamental ways in which complex food webs may spiral out of control
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Predicting emergent animal biodiversity patterns across multiple scales
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Integrated assessment models for ecologists: the present and the future
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The strengths and weaknesses of species distribution models in biome delimitation
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MadingleyR: An R package for mechanistic ecosystem modelling
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Integrating modelling of biodiversity composition and ecosystem function
inferred← citeshttps://doi.org/10.1111/oik.04338openalex-snapshot
The present and future effects of land use on ecological assemblages in tropical grasslands and savannas in Africa
inferred← citeshttps://doi.org/10.1111/oik.07748openalex-snapshot
The Madingley general ecosystem model predicts bushmeat yields, species extinction rates and ecosystem‐level impacts of bushmeat harvesting
inferred← citeshttps://doi.org/10.1126/sciadv.aar3001openalex-snapshot
A dynamic ocean management tool to reduce bycatch and support sustainable fisheries
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Coextinctions dominate future vertebrate losses from climate and land use change
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Improving the forecast for biodiversity under climate change
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AN AGENT-BASED MODEL OF HUMAN DISPERSALS AT A GLOBAL SCALE
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e-Science, GIS e curadoria digital de dados arqueológicos e históricos
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Macroscale ecology in the 21st century: Toward multidisciplinary integration in advancement for scientific solutions of sustainable development
inferred← citeshttps://doi.org/10.1186/1472-6785-13-16openalex-snapshot
A decadal view of biodiversity informatics: challenges and priorities
inferred← citeshttps://doi.org/10.1186/1741-7007-12-22openalex-snapshot
Open questions: are the dynamics of ecological communities predictable?
inferred← citeshttps://doi.org/10.1186/s12898-015-0046-8openalex-snapshot
A global perspective on decadal challenges and priorities in biodiversity informatics
inferred← citeshttps://doi.org/10.1186/s12898-016-0103-yopenalex-snapshot
BioVeL: a virtual laboratory for data analysis and modelling in biodiversity science and ecology
inferred← citeshttps://doi.org/10.1186/s13742-016-0118-5openalex-snapshot
Simulating social-ecological systems: the Island Digital Ecosystem Avatars (IDEA) consortium
inferred← citeshttps://doi.org/10.1214/19-aap1504openalex-snapshot
Monte Carlo with determinantal point processes
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Emergent Global Patterns of Ecosystem Structure and Function from a Mechanistic General Ecosystem Model
inferred← citeshttps://doi.org/10.1371/journal.pbio.3001835openalex-snapshot
Multiomics in the central Arctic Ocean for benchmarking biodiversity change
inferred← citeshttps://doi.org/10.1371/journal.pcbi.1011268openalex-snapshot
Time-travelling pathogens and their risk to ecological communities
inferred← citeshttps://doi.org/10.1371/journal.pone.0084211openalex-snapshot
Metamodels for Transdisciplinary Analysis of Wildlife Population Dynamics
inferred← citeshttps://doi.org/10.1371/journal.pone.0116902openalex-snapshot
Metro Maps of Plant Disease Dynamics—Automated Mining of Differences Using Hyperspectral Images
inferred← citeshttps://doi.org/10.1371/journal.pone.0335033openalex-snapshot
Simulating macroevolutionary trends and open-ended evolution with a novel mechanistic multi-level approach
inferred← citeshttps://doi.org/10.14288/1.0308597openalex-snapshot
Sea otters, kelp forests, and ecosystem services : modelling habitats, uncertainties, and trade-offs
inferred← citeshttps://doi.org/10.18174/381590openalex-snapshot
Searching for balance : stability and equilibria of food webs
inferred← citeshttps://doi.org/10.18174/391208openalex-snapshot
Making eco logic and models work : an integrative approach to lake ecosystem modelling
inferred← citeshttps://doi.org/10.18174/413490openalex-snapshot
A blooming business : Identifying limits to Lake Taihu's nutrient input
inferred← citeshttps://doi.org/10.1890/es15-00368.1openalex-snapshot
Terrestrial mammal three‐dimensional photogrammetry: multispecies mass estimation
inferred← citeshttps://doi.org/10.21425/f57428888openalex-snapshot
Macroecology meets IPBES
inferred← citeshttps://doi.org/10.21425/f5fbg28888openalex-snapshot
Macroecology meets IPBES
inferred← citeshttps://doi.org/10.25560/76025openalex-snapshot
Effective design and use of indicators for marine conservation
inferred← citeshttps://doi.org/10.25560/76499openalex-snapshot
Mechanistic models of global biodiversity
inferred← citeshttps://doi.org/10.31219/osf.io/zs4fpopenalex-snapshot
Global shift in a key plant trait indicates a change in biosphere function
inferred← citeshttps://doi.org/10.32942/osf.io/hn9xsopenalex-snapshot
On the importance of the megabiota to the functioning of the biosphere
inferred← citeshttps://doi.org/10.32942/x2dw56openalex-snapshot
MECHANISTIC MODEL OF VEGETATION STRUCTURE AND ANIMAL COMMUNITY INTERACTIONS-INTEGRATING GEDI & TLS DATA IN THE MADINGLEY MODEL
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Photogrammetry-based body condition for monitoring an Arctic marine mammal experiencing habitat loss
inferred← citeshttps://doi.org/10.3390/e25111526openalex-snapshot
On the History of Ecosystem Dynamical Modeling: The Rise and Promises of Qualitative Models
inferred← citeshttps://doi.org/10.3390/electronics15030574openalex-snapshot
Interoperability to Improve Science-Based Decision Making: Adapting a Risk Analysis Framework to Improve Translational Environmental Health Science
inferred← citeshttps://doi.org/10.3897/bdj.3.e5063openalex-snapshot
Integrating and visualizing primary data from prospective and legacy taxonomic literature
inferred← citeshttps://doi.org/10.3897/phytokeys.38.7168openalex-snapshot
The use of Optical Character Recognition (OCR) in the digitisation of herbarium specimen labels
inferred← citeshttps://doi.org/10.3897/rio.5.e46404openalex-snapshot
SYNTHESYS+ Abridged Grant Proposal
inferred← citeshttps://doi.org/10.3897/rio.8.e81136openalex-snapshot
Biodiversity Community Integrated Knowledge Library (BiCIKL)
inferred← citeshttps://doi.org/10.4081/jlimnol.2014.826openalex-snapshot
Trait- and size-based descriptions of trophic links in freshwater food webs: current status and perspectives
inferred← citeshttps://doi.org/10.4081/jlimnol.2021.2035openalex-snapshot
Hitting the sweet spot of complexity: Reasons why the development of new custom-tailored models is still warranted and should be encouraged in aquatic sciences
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Dynamic virtual ecosystems as a tool for detecting large-scale responses of biodiversity to environmental and land-use change
inferred← citeshttps://doi.org/10.5194/bg-10-7553-2013openalex-snapshot
Distribution of phytoplankton functional types in high-nitrate, low-chlorophyll waters in a new diagnostic ecological indicator model
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Response to Anonymous Referee #1
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Taxonomies for structuring models for World–Earth systems analysis of the Anthropocene: subsystems, their interactions and social–ecological feedback loops
inferred← citeshttps://doi.org/10.5194/esd-9-507-2018openalex-snapshot
Analytically tractable climate–carbon cycle feedbacks under 21st century anthropogenic forcing
inferred← citeshttps://doi.org/10.5194/gmd-12-1119-2019openalex-snapshot
Realized ecological forecast through an interactive Ecological Platform for Assimilating Data (EcoPAD, v1.0) into models
inferred← citeshttps://doi.org/10.5194/gmd-18-9633-2025openalex-snapshot
Modelling herbivory impacts on vegetation structure and productivity
inferred← citeshttps://doi.org/10.6084/m9.figshare.6531194openalex-snapshot
MadingleyRegimeShiftsCompiled.zip
inferred← citeshttps://doi.org/10.70675/e9c165a4z3ea4z453ez9920zc1d71224854eopenalex-snapshot
Impacts du changement global sur la physiologie des organismes marins : Une approche protéomique
inferred← citeshttps://doi.org/10.70675/f44c1cf0z1a14z4f2fz8970z3ba98e0eb551openalex-snapshot
Oiseaux chanteurs des milieux ouverts de montagne et changements globaux
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