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Control, exploitation and tolerance of intracellular noise

https://doi.org/10.1038/nature01258
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Outgoing claims: the papers this work cites, builds on, or argues with.

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Predicting Gene Expression Noise from Gene Expression Variations
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Implicit Methods for Qualitative Modeling of Gene Regulatory Networks
inferred← citeshttps://doi.org/10.1007/978-1-62703-417-3_19openalex-snapshot
Application of Microfluidics to Study Stem Cell Dynamics
inferred← citeshttps://doi.org/10.1007/978-1-84628-780-0_13openalex-snapshot
The Stochastic Model and Metastability of the Gene Network
inferred← citeshttps://doi.org/10.1007/978-3-030-73033-8_3openalex-snapshot
Mathematical Preliminary–Stochastic Modeling
inferred← citeshttps://doi.org/10.1007/978-3-031-43575-1_4openalex-snapshot
Continuous-Time Markov Chains
inferred← citeshttps://doi.org/10.1007/978-3-031-46895-7_9openalex-snapshot
Metabolic Modeling (Computational and Mathematical) of Bacterial Infections
inferred← citeshttps://doi.org/10.1007/978-3-319-21819-9_1openalex-snapshot
The Unconventionality of Nature: Biology, from Noise to Functional Randomness
inferred← citeshttps://doi.org/10.1007/978-3-319-27583-3_6openalex-snapshot
Mathematical Models in Stem Cell Differentiation and Fate Predictability
inferred← citeshttps://doi.org/10.1007/978-3-319-62627-7_11openalex-snapshot
A Review of Stochastic and Delay Simulation Approaches in Both Time and Space in Computational Cell Biology
inferred← citeshttps://doi.org/10.1007/978-3-319-64550-6_23openalex-snapshot
New Three-Dimensional NLS-bio-feedback Approaches in Site Specific Diagnosis of Cancer
inferred← citeshttps://doi.org/10.1007/978-3-540-24743-2_28openalex-snapshot
Modeling Subtilin Production in Bacillus subtilis Using Stochastic Hybrid Systems
inferred← citeshttps://doi.org/10.1007/978-3-540-32126-2_6openalex-snapshot
Discrete Event Multi-level Models for Systems Biology
inferred← citeshttps://doi.org/10.1007/978-3-540-71037-0openalex-snapshot
Knowledge Discovery and Emergent Complexity in Bioinformatics
inferred← citeshttps://doi.org/10.1007/978-3-540-71037-0_1openalex-snapshot
Knowledge Discovery and Emergent Complexity in Bioinformatics
inferred← citeshttps://doi.org/10.1007/978-3-540-71681-5_12openalex-snapshot
Production-Passage-Time Approximation: A New Approximation Method to Accelerate the Simulation Process of Enzymatic Reactions
inferred← citeshttps://doi.org/10.1007/978-3-540-71988-5_8openalex-snapshot
Modelling and Analysis of Cell Death Signalling
inferred← citeshttps://doi.org/10.1007/978-3-540-88787-4_3openalex-snapshot
Transition in the Higher-order Structure of DNA in Aqueous Solution
inferred← citeshttps://doi.org/10.1007/978-3-540-89208-3_650openalex-snapshot
The role of biomedical engineers in systems / synthetic biology
inferred← citeshttps://doi.org/10.1007/978-3-642-02301-9_1openalex-snapshot
Gene Regulatory Models for Plant Development and Evolution
inferred← citeshttps://doi.org/10.1007/978-3-642-02597-6_6openalex-snapshot
Chemical Fluxes in Cellular Steady States Measured by Fluorescence Correlation Spectroscopy
inferred← citeshttps://doi.org/10.1007/978-3-642-02658-4_27openalex-snapshot
Sliding Window Abstraction for Infinite Markov Chains
inferred← citeshttps://doi.org/10.1007/978-3-642-03845-7_12openalex-snapshot
Approximation of Event Probabilities in Noisy Cellular Processes
inferred← citeshttps://doi.org/10.1007/978-3-642-04420-5_2openalex-snapshot
Formalisms for Specifying Markovian Population Models
inferred← citeshttps://doi.org/10.1007/978-3-642-13523-1_13openalex-snapshot
Solving Partial Differential Equation via Stochastic Process
inferred← citeshttps://doi.org/10.1007/978-3-642-25969-2_2openalex-snapshot
Stochastic Modelling in Life Sciences
inferred← citeshttps://doi.org/10.1007/978-3-642-25969-2_4openalex-snapshot
Approximation of Markov Jump Processes by Diffusions
inferred← citeshttps://doi.org/10.1007/978-3-642-27737-5_32-2openalex-snapshot
Biochemistry, Chaotic Dynamics, Noise, and Fractal Space in
inferred← citeshttps://doi.org/10.1007/978-3-642-33253-1_18openalex-snapshot
Toxin-Antitoxin Loci in Streptococcus pneumoniae
inferred← citeshttps://doi.org/10.1007/978-3-662-49809-5_8openalex-snapshot
The Broader View
inferred← citeshttps://doi.org/10.1007/978-4-431-53868-4_30openalex-snapshot
Pump Current as a Signal Transformation
inferred← citeshttps://doi.org/10.1007/978-4-431-56027-2_1openalex-snapshot
Development and Regeneration of Hematopoietic Stem Cells
inferred← citeshttps://doi.org/10.1007/978-90-481-3252-2_15openalex-snapshot
Epistemic Consequences of Two Different Strategies for Decomposing Biological Networks
inferred← citeshttps://doi.org/10.1007/978-94-007-2888-2_24openalex-snapshot
Calcium Signaling: From Single Channels to Pathways
inferred← citeshttps://doi.org/10.1007/978-94-017-9514-2_10openalex-snapshot
Switching Mechanism in the p53 Regulatory Network
inferred← citeshttps://doi.org/10.1007/978-94-017-9822-8_5openalex-snapshot
Developmental Noise: Explaining the Specific Heterogeneity of Individual Organisms
inferred← citeshttps://doi.org/10.1007/978-94-024-1577-3_3openalex-snapshot
MicroRNA Function of Some Life Process in the Gene Network
inferred← citeshttps://doi.org/10.1007/978-981-32-9729-6_3openalex-snapshot
Single-Cell Culture and Analysis on Microfluidics
inferred← citeshttps://doi.org/10.1007/bf02715812openalex-snapshot
Quantitative-genetic analysis of wing form and bilateral asymmetry in isochromosomal lines ofDrosophila subobscura using Procrustes methods
inferred← citeshttps://doi.org/10.1007/s00034-011-9274-0openalex-snapshot
H ∞ Filtering for Markovian Switching Genetic Regulatory Networks with Time-Delays and Stochastic Disturbances
inferred← citeshttps://doi.org/10.1007/s00216-008-2378-0openalex-snapshot
Concomitant detection of CYP1A1 enzymatic activity and CYP1A1 protein in individual cells of a human urothelial cell line using a bilayer microfluidic device
inferred← citeshttps://doi.org/10.1007/s00216-010-4205-7openalex-snapshot
Compact disk (CD)-shaped device for single cell isolation and PCR of a specific gene in the isolated cell
inferred← citeshttps://doi.org/10.1007/s00285-011-0468-7openalex-snapshot
Multiscale stochastic modelling of gene expression
inferred← citeshttps://doi.org/10.1007/s00285-016-1065-6openalex-snapshot
Memory and adaptive behavior in population dynamics: anti-predator behavior as a case study
inferred← citeshttps://doi.org/10.1007/s00285-018-1308-9openalex-snapshot
A stochastic model of corneal epithelium maintenance and recovery following perturbation
inferred← citeshttps://doi.org/10.1007/s00335-007-9044-2openalex-snapshot
From mouse genetics to systems biology
inferred← citeshttps://doi.org/10.1007/s10441-017-9307-6openalex-snapshot
External Noise and External Signal Induced Transition of Gene Switch and Coherence Resonance in the Genetic Regulatory System
inferred← citeshttps://doi.org/10.1007/s10539-013-9363-5openalex-snapshot
Microbes modeling ontogeny
inferred← citeshttps://doi.org/10.1007/s10539-015-9497-8openalex-snapshot
Biological regulation: controlling the system from within
inferred← citeshttps://doi.org/10.1007/s10544-007-9115-xopenalex-snapshot
Electrophoresis-assisted single-cell electroporation for efficient intracellular delivery
inferred← citeshttps://doi.org/10.1007/s10544-011-9570-2openalex-snapshot
Study of ethanol induced toxicity in liver explants using microfluidic devices
inferred← citeshttps://doi.org/10.1007/s10616-006-9007-6openalex-snapshot
Current status of transcriptional regulation systems
inferred← citeshttps://doi.org/10.1007/s10827-009-0139-5openalex-snapshot
Spine neck geometry determines spino-dendritic cross-talk in the presence of mobile endogenous calcium binding proteins
inferred← citeshttps://doi.org/10.1007/s10867-006-9016-xopenalex-snapshot
Approaches to Biosimulation of Cellular Processes
inferred← citeshttps://doi.org/10.1007/s10910-009-9625-2openalex-snapshot
Numerical solution of nonlinear singularly perturbed problems on nonuniform meshes by using a non-standard algorithm
inferred← citeshttps://doi.org/10.1007/s10910-009-9636-zopenalex-snapshot
Numerical solution of nonlinear singularly perturbed problems by using a non-standard algorithm on variable stepsize implementation (CMMSE–2009)
inferred← citeshttps://doi.org/10.1007/s10910-012-0040-8openalex-snapshot
Analytic solution of nonlinear singularly perturbed initial value problems through iteration
inferred← citeshttps://doi.org/10.1007/s10910-012-0085-8openalex-snapshot
A numerical characteristic method for probability generating functions on stochastic first-order reaction networks
inferred← citeshttps://doi.org/10.1007/s10910-016-0620-0openalex-snapshot
Optimization problems in chemical reactions using continuous-time Markov chains
inferred← citeshttps://doi.org/10.1007/s10955-006-9218-4openalex-snapshot
How the Number of Alleles Influences Gene Expression
inferred← citeshttps://doi.org/10.1007/s10955-012-0459-0openalex-snapshot
Deterministic and Stochastic Descriptions of Gene Expression Dynamics
inferred← citeshttps://doi.org/10.1007/s11047-014-9424-yopenalex-snapshot
Bounded noises as a natural tool to model extrinsic fluctuations in biomolecular networks
inferred← citeshttps://doi.org/10.1007/s11229-024-04876-6openalex-snapshot
The epistemic problem of singular causation
inferred← citeshttps://doi.org/10.1007/s11229-025-05288-wopenalex-snapshot
Noise and mechanisms
inferred← citeshttps://doi.org/10.1007/s11306-012-0399-3openalex-snapshot
COVAIN: a toolbox for uni- and multivariate statistics, time-series and correlation network analysis and inverse estimation of the differential Jacobian from metabolomics covariance data
inferred← citeshttps://doi.org/10.1007/s11424-010-0208-xopenalex-snapshot
Stochastic synchronization of circadian rhythms
inferred← citeshttps://doi.org/10.1007/s11426-005-0077-7openalex-snapshot
On the study of nonlinear dynamics of complex chemical reaction systems
inferred← citeshttps://doi.org/10.1007/s11426-009-0057-4openalex-snapshot
Colored noise-enhanced intrinsic stochastic oscillations in CO oxidation on nanometer-sized Pd particles
inferred← citeshttps://doi.org/10.1007/s11538-007-9250-9openalex-snapshot
On the Long-Term Fitness of Cells in Periodically Switching Environments
inferred← citeshttps://doi.org/10.1007/s11538-012-9766-5openalex-snapshot
Deterministic Versus Stochastic Cell Polarisation Through Wave-Pinning
inferred← citeshttps://doi.org/10.1007/s11538-013-9909-3openalex-snapshot
Multimodality and Flexibility of Stochastic Gene Expression
inferred← citeshttps://doi.org/10.1007/s11538-018-0521-4openalex-snapshot
Sensitivity Analysis for Multiscale Stochastic Reaction Networks Using Hybrid Approximations
inferred← citeshttps://doi.org/10.1007/s11569-020-00366-4openalex-snapshot
Noise and Synthetic Biology: How to Deal with Stochasticity?
inferred← citeshttps://doi.org/10.1007/s11571-012-9236-7openalex-snapshot
Functional characteristics of a double negative feedback loop mediated by microRNAs
inferred← citeshttps://doi.org/10.1007/s11693-011-9084-5openalex-snapshot
The ten grand challenges of synthetic life
inferred← citeshttps://doi.org/10.1007/s12026-012-8322-6openalex-snapshot
Computational approaches to understanding dendritic cell responses to influenza virus infection
inferred← citeshttps://doi.org/10.1007/s12064-021-00338-6openalex-snapshot
Role of integrated noise in pathway-specific signal propagation in feed-forward loops
inferred← citeshttps://doi.org/10.1007/s12648-024-03510-yopenalex-snapshot
Investigation of noise-induced order in high-dimensional phase spaces using mutual information
inferred← citeshttps://doi.org/10.1007/s40139-022-00230-yopenalex-snapshot
Dynamics and Sensitivity of Signaling Pathways
inferred← citeshttps://doi.org/10.1007/s40484-014-0025-7openalex-snapshot
Modeling stochastic noise in gene regulatory systems
inferred← citeshttps://doi.org/10.1007/s40484-014-0035-5openalex-snapshot
Modeling stochastic phenotype switching and bet‐hedging in bacteria: stochastic nonlinear dynamics and critical state identification
inferred← citeshttps://doi.org/10.1016/b978-0-12-372550-9.00012-2openalex-snapshot
Software Tools for Systems Biology
inferred← citeshttps://doi.org/10.1016/b978-0-12-374396-1.00091-xopenalex-snapshot
Single-Molecule and Nanoscale Approaches to Biological Signaling
inferred← citeshttps://doi.org/10.1016/b978-0-12-385075-1.00007-xopenalex-snapshot
Design and Connection of Robust Genetic Circuits
inferred← citeshttps://doi.org/10.1016/b978-0-12-388403-9.00005-9openalex-snapshot
Stochastic Modeling of Cellular Networks
inferred← citeshttps://doi.org/10.1016/b978-0-12-801213-0.00007-1openalex-snapshot
BioModel Engineering with Petri Nets
inferred← citeshttps://doi.org/10.1016/b978-0-12-809633-8.20294-xopenalex-snapshot
Cell Modeling and Simulation
inferred← citeshttps://doi.org/10.1016/b978-0-12-815409-0.00016-4openalex-snapshot
Compact disc-type biosensor devices and their applications
inferred← citeshttps://doi.org/10.1016/b978-0-323-95502-7.00105-6openalex-snapshot
Cell Modelling and Simulation
inferred← citeshttps://doi.org/10.1016/b978-0-444-52076-0.50013-4openalex-snapshot
The Complexity of Cell-Biological Systems
inferred← citeshttps://doi.org/10.1016/b978-012436643-5/50093-6openalex-snapshot
(Post) Genomic Stem Cell
inferred← citeshttps://doi.org/10.1016/j.aeue.2019.01.006openalex-snapshot
Neuronal communication: Stochastic neuron dynamics and multi-synchrony states
inferred← citeshttps://doi.org/10.1016/j.artint.2022.103743openalex-snapshot
Risk-averse autonomous systems: A brief history and recent developments from the perspective of optimal control
inferred← citeshttps://doi.org/10.1016/j.automatica.2014.08.006openalex-snapshot
Stability analysis for stochastic hybrid systems: A survey
inferred← citeshttps://doi.org/10.1016/j.automatica.2024.111546openalex-snapshot
Information-theoretic multi-time-scale partially observable systems with inspiration from leukemia treatment
inferred← citeshttps://doi.org/10.1016/j.bbagen.2010.04.009openalex-snapshot
Miniaturization of biological assays — Overview on microwell devices for single-cell analyses
inferred← citeshttps://doi.org/10.1016/j.bbagen.2011.10.007openalex-snapshot
Fundamental properties of Ca2+ signals
inferred← citeshttps://doi.org/10.1016/j.bbapap.2009.05.002openalex-snapshot
Know your limits: Assumptions, constraints and interpretation in systems biology
inferred← citeshttps://doi.org/10.1016/j.bbrc.2006.09.115openalex-snapshot
Quantitative measurement of damage caused by 1064-nm wavelength optical trapping of Escherichia coli cells using on-chip single cell cultivation system
inferred← citeshttps://doi.org/10.1016/j.bej.2007.08.019openalex-snapshot
Elaboration of a biased random walk model with a high spatial resolution for the simulation of the microorganisms exposure to gradient stress in scale-down reactors
inferred← citeshttps://doi.org/10.1016/j.bej.2014.08.017openalex-snapshot
Quantitative modeling of inducer transport in fed-batch cultures of Escherichia coli
inferred← citeshttps://doi.org/10.1016/j.biosystems.2003.07.001openalex-snapshot
Constructive effects of fluctuations in genetic and biochemical regulatory systems
inferred← citeshttps://doi.org/10.1016/j.biosystems.2004.12.002openalex-snapshot
A hybrid systems framework for cellular processes
inferred← citeshttps://doi.org/10.1016/j.biosystems.2005.03.006openalex-snapshot
Trading the micro-world of combinatorial complexity for the macro-world of protein interaction domains
inferred← citeshttps://doi.org/10.1016/j.biosystems.2005.10.006openalex-snapshot
Qualitative analysis of the relation between DNA microarray data and behavioral models of regulation networks
inferred← citeshttps://doi.org/10.1016/j.biosystems.2006.06.002openalex-snapshot
Alternative routes and mutational robustness in complex regulatory networks
inferred← citeshttps://doi.org/10.1016/j.biosystems.2009.11.002openalex-snapshot
Stochastic models for inferring genetic regulation from microarray gene expression data
inferred← citeshttps://doi.org/10.1016/j.biosystems.2015.01.008openalex-snapshot
Methodologies for the modeling and simulation of biochemical networks, illustrated for signal transduction pathways: A primer
inferred← citeshttps://doi.org/10.1016/j.biotechadv.2011.06.014openalex-snapshot
Simulation of the Ras/cAMP/PKA pathway in budding yeast highlights the establishment of stable oscillatory states
inferred← citeshttps://doi.org/10.1016/j.bmcl.2006.03.019openalex-snapshot
Quantitative structure–activity relationship studies on HEPTs by supervised stochastic resonance
inferred← citeshttps://doi.org/10.1016/j.bpc.2005.06.008openalex-snapshot
Dynamical behavior of lipid bilayer membranes for taste substances under random membrane-potential fluctuations
inferred← citeshttps://doi.org/10.1016/j.bpc.2006.01.008openalex-snapshot
Spatial modeling of dimerization reaction dynamics in the plasma membrane: Monte Carlo vs. continuum differential equations
inferred← citeshttps://doi.org/10.1016/j.bpc.2006.09.006openalex-snapshot
Engineered internal noise stochastic resonator in gene network: A model study
inferred← citeshttps://doi.org/10.1016/j.bpc.2009.04.001openalex-snapshot
Intrinsic noise in post-transcriptional gene regulation by small non-coding RNA
inferred← citeshttps://doi.org/10.1016/j.bpc.2009.08.009openalex-snapshot
Internal noise-driven circadian oscillator in Drosophila
inferred← citeshttps://doi.org/10.1016/j.bpc.2010.02.006openalex-snapshot
Importance of cell variability for calcium signaling in rat airway myocytes
inferred← citeshttps://doi.org/10.1016/j.bpj.2008.09.052openalex-snapshot
Translational Repression Contributes Greater Noise to Gene Expression than Transcriptional Repression
inferred← citeshttps://doi.org/10.1016/j.bpj.2009.02.062openalex-snapshot
Accelerated Search Kinetics Mediated by Redox Reactions of DNA Repair Enzymes
inferred← citeshttps://doi.org/10.1016/j.bpj.2010.02.045openalex-snapshot
Interplay between Intrinsic Noise and the Stochasticity of the Cell Cycle in Bacterial Colonies
inferred← citeshttps://doi.org/10.1016/j.bpj.2010.07.010openalex-snapshot
Fluctuations and the Rate-Limiting Step of Peptide-Induced Membrane Leakage
inferred← citeshttps://doi.org/10.1016/j.bpj.2010.12.3737openalex-snapshot
Measuring Retroactivity from Noise in Gene Regulatory Networks
inferred← citeshttps://doi.org/10.1016/j.bpj.2013.08.010openalex-snapshot
Epigenetic Memory Emerging from Integrated Transcription Bursts
inferred← citeshttps://doi.org/10.1016/j.bpj.2015.11.033openalex-snapshot
Population-Dynamic Modeling of Bacterial Horizontal Gene Transfer by Natural Transformation
inferred← citeshttps://doi.org/10.1016/j.bpj.2016.07.036openalex-snapshot
Criticality and Adaptivity in Enzymatic Networks
inferred← citeshttps://doi.org/10.1016/j.bpj.2017.02.013openalex-snapshot
Synthetic Biology: Engineering Living Systems from Biophysical Principles
inferred← citeshttps://doi.org/10.1016/j.bpj.2018.05.009openalex-snapshot
Molecular Filters for Noise Reduction
inferred← citeshttps://doi.org/10.1016/j.cam.2006.03.035openalex-snapshot
Rival approaches to mathematical modelling in immunology
inferred← citeshttps://doi.org/10.1016/j.ceb.2003.10.016openalex-snapshot
Tissue architecture: the ultimate regulator of breast epithelial function
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