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The logic of chromatin architecture and remodelling at promoters

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/j.1460-2075.1986.tb04552.xopenalex-snapshot
Removal of positioned nucleosomes from the yeast PHO5 promoter upon PHO5 induction releases additional upstream activating DNA elements.
inferredcites →https://doi.org/10.1002/j.1460-2075.1990.tb07432.xopenalex-snapshot
Role of trans‐activating proteins in the generation of active chromatin at the PHO5 promoter in S. cerevisiae.
inferredcites →https://doi.org/10.1006/jmbi.1997.1494openalex-snapshot
New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning
inferredcites →https://doi.org/10.1007/s00412-003-0232-xopenalex-snapshot
Chromatin remodeling by nuclear receptors
inferredcites →https://doi.org/10.1016/j.cell.2005.08.036openalex-snapshot
Genome-Wide Dynamics of Htz1, a Histone H2A Variant that Poises Repressed/Basal Promoters for Activation through Histone Loss
inferredcites →https://doi.org/10.1016/j.cell.2005.10.002openalex-snapshot
Histone Variant H2A.Z Marks the 5′ Ends of Both Active and Inactive Genes in Euchromatin
inferredcites →https://doi.org/10.1016/j.cell.2005.10.023openalex-snapshot
Histone H3 Methylation by Set2 Directs Deacetylation of Coding Regions by Rpd3S to Suppress Spurious Intragenic Transcription
inferredcites →https://doi.org/10.1016/j.cell.2007.01.015openalex-snapshot
The Role of Chromatin during Transcription
inferredcites →https://doi.org/10.1016/j.cell.2007.05.009openalex-snapshot
High-Resolution Profiling of Histone Methylations in the Human Genome
inferredcites →https://doi.org/10.1016/j.cell.2008.02.022openalex-snapshot
Dynamic Regulation of Nucleosome Positioning in the Human Genome
inferredcites →https://doi.org/10.1016/j.cell.2009.02.043openalex-snapshot
Mechanisms that Specify Promoter Nucleosome Location and Identity
inferredcites →https://doi.org/10.1016/j.molcel.2004.05.016openalex-snapshot
Chromatin Disassembly Mediated by the Histone Chaperone Asf1 Is Essential for Transcriptional Activation of the Yeast PHO5 and PHO8 Genes
inferredcites →https://doi.org/10.1016/j.molcel.2004.05.022openalex-snapshot
Precise Nucleosome Positioning and the TATA Box Dictate Requirements for the Histone H4 Tail and the Bromodomain Factor Bdf1
inferredcites →https://doi.org/10.1016/j.molcel.2007.07.011openalex-snapshot
Genome-Wide Replication-Independent Histone H3 Exchange Occurs Predominantly at Promoters and Implicates H3 K56 Acetylation and Asf1
inferredcites →https://doi.org/10.1016/j.molcel.2008.11.020openalex-snapshot
A Library of Yeast Transcription Factor Motifs Reveals a Widespread Function for Rsc3 in Targeting Nucleosome Exclusion at Promoters
inferredcites →https://doi.org/10.1016/j.sbi.2009.01.004openalex-snapshot
Poly(dA:dT) tracts: major determinants of nucleosome organization
inferredcites →https://doi.org/10.1016/s0092-8674(00)80321-9openalex-snapshot
ACF, an ISWI-Containing and ATP-Utilizing Chromatin Assembly and Remodeling Factor
inferredcites →https://doi.org/10.1016/s0092-8674(00)80551-6openalex-snapshot
Histone Octamer Transfer by a Chromatin-Remodeling Complex
inferredcites →https://doi.org/10.1016/s0092-8674(00)80797-7openalex-snapshot
Nucleosome Movement by CHRAC and ISWI without Disruption or trans-Displacement of the Histone Octamer
inferredcites →https://doi.org/10.1016/s0092-8674(02)00654-2openalex-snapshot
Cooperation between Complexes that Regulate Chromatin Structure and Transcription
inferredcites →https://doi.org/10.1016/s0092-8674(04)00205-3openalex-snapshot
Identification and Distinct Regulation of Yeast TATA Box-Containing Genes
inferredcites →https://doi.org/10.1016/s0962-8924(98)01263-xopenalex-snapshot
The SAGA unfolds: convergence of transcription regulators in chromatin-modifying complexes
inferredcites →https://doi.org/10.1016/s1097-2765(02)00542-7openalex-snapshot
The Histone Variant H3.3 Marks Active Chromatin by Replication-Independent Nucleosome Assembly
inferredcites →https://doi.org/10.1016/s1097-2765(04)00087-5openalex-snapshot
A Genome-Wide Housekeeping Role for TFIID and a Highly Regulated Stress-Related Role for SAGA in Saccharomyces cerevisiae
inferredcites →https://doi.org/10.1038/23506openalex-snapshot
Nucleosome mobilization catalysed by the yeast SWI/SNF complex
inferredcites →https://doi.org/10.1038/nature04979openalex-snapshot
A genomic code for nucleosome positioning
inferredcites →https://doi.org/10.1038/nature05632openalex-snapshot
Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome
inferredcites →https://doi.org/10.1038/nature06391openalex-snapshot
Chromatin remodelling at promoters suppresses antisense transcription
inferredcites →https://doi.org/10.1038/nature06867openalex-snapshot
Chromatin decouples promoter threshold from dynamic range
inferredcites →https://doi.org/10.1038/nature06929openalex-snapshot
Nucleosome organization in the Drosophila genome
inferredcites →https://doi.org/10.1038/nature07667openalex-snapshot
The DNA-encoded nucleosome organization of a eukaryotic genome
inferredcites →https://doi.org/10.1038/ng1400openalex-snapshot
Evidence for nucleosome depletion at active regulatory regions genome-wide
inferredcites →https://doi.org/10.1038/ng1878openalex-snapshot
Nucleosome positions predicted through comparative genomics
inferredcites →https://doi.org/10.1038/ng2117openalex-snapshot
A high-resolution atlas of nucleosome occupancy in yeast
inferredcites →https://doi.org/10.1038/nrg2206openalex-snapshot
Nucleosome destabilization in the epigenetic regulation of gene expression
inferredcites →https://doi.org/10.1038/nrg2522openalex-snapshot
Nucleosome positioning and gene regulation: advances through genomics
inferredcites →https://doi.org/10.1038/nrm1945openalex-snapshot
Chromatin remodelling: the industrial revolution of DNA around histones
inferredcites →https://doi.org/10.1038/nsmb1111openalex-snapshot
Antagonistic forces that position nucleosomes in vivo
inferredcites →https://doi.org/10.1038/sj.emboj.7600220openalex-snapshot
Topography of the ISW2–nucleosome complex: insights into nucleosome spacing and chromatin remodeling
inferredcites →https://doi.org/10.1038/sj.emboj.7601946openalex-snapshot
RSC regulates nucleosome positioning at Pol II genes and density at Pol III genes
inferredcites →https://doi.org/10.1042/bst0310893openalex-snapshot
Pathways for remodelling chromatin
inferredcites →https://doi.org/10.1073/pnas.82.24.8419openalex-snapshot
Naturally occurring poly(dA-dT) sequences are upstream promoter elements for constitutive transcription in yeast.
inferredcites →https://doi.org/10.1093/embo-reports/kvf056openalex-snapshot
Modulation of ISWI function by site‐specific histone acetylation
inferredcites →https://doi.org/10.1093/nar/16.14.6677openalex-snapshot
Statistical distributions of nucleosomes: nonrandom locations by a stochastic mechanism
inferredcites →https://doi.org/10.1096/fasebj.23.1_supplement.493.2openalex-snapshot
A canonical promoter organization of the transcription machinery and its regulators in the Saccharomyces genome
inferredcites →https://doi.org/10.1101/gad.1298905openalex-snapshot
Genome-wide identification of Isw2 chromatin-remodeling targets by localization of a catalytically inactive mutant
inferredcites →https://doi.org/10.1101/gad.13.18.2339openalex-snapshot
ATP-dependent remodeling and acetylation as regulators of chromatin fluidity
inferredcites →https://doi.org/10.1101/gad.1388106openalex-snapshot
The Saccharomyces cerevisiae histone H2A variant Htz1 is acetylated by NuA4
inferredcites →https://doi.org/10.1101/gad.1395506openalex-snapshot
Acetylation of H2AZ Lys 14 is associated with genome-wide gene activity in yeast
inferredcites →https://doi.org/10.1101/gad.1547707openalex-snapshot
Nucleosome stability mediated by histone variants H3.3 and H2A.Z
inferredcites →https://doi.org/10.1101/gr.076059.108openalex-snapshot
Two strategies for gene regulation by promoter nucleosomes
inferredcites →https://doi.org/10.1101/gr.078261.108openalex-snapshot
A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome
inferredcites →https://doi.org/10.1126/science.1087374openalex-snapshot
Transcription Elongation Factors Repress Transcription Initiation from Cryptic Sites
inferredcites →https://doi.org/10.1126/science.1090701openalex-snapshot
ATP-Driven Exchange of Histone H2AZ Variant Catalyzed by SWR1 Chromatin Remodeling Complex
inferredcites →https://doi.org/10.1126/science.1098641openalex-snapshot
Control of Stochasticity in Eukaryotic Gene Expression
inferredcites →https://doi.org/10.1126/science.1105891openalex-snapshot
Noise in Gene Expression: Origins, Consequences, and Control
inferredcites →https://doi.org/10.1126/science.1112178openalex-snapshot
Genome-Scale Identification of Nucleosome Positions in S. cerevisiae
inferredcites →https://doi.org/10.1126/science.1134053openalex-snapshot
Dynamics of Replication-Independent Histone Turnover in Budding Yeast
inferredcites →https://doi.org/10.1126/science.1150843openalex-snapshot
Transcription Regulation Through Promoter-Proximal Pausing of RNA Polymerase II
inferredcites →https://doi.org/10.1146/annurev.biochem.71.110601.135400openalex-snapshot
ATP-Dependent Nucleosome Remodeling
inferredcites →https://doi.org/10.1186/gb-2004-5-9-r62openalex-snapshot
Global nucleosome occupancy in yeast
inferredcites →https://doi.org/10.1371/journal.pbio.0030384openalex-snapshot
Variant Histone H2A.Z Is Globally Localized to the Promoters of Inactive Yeast Genes and Regulates Nucleosome Positioning
inferredcites →https://doi.org/10.1371/journal.pcbi.1000216openalex-snapshot
Distinct Modes of Regulation by Chromatin Encoded through Nucleosome Positioning Signals

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

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inferred← citeshttps://doi.org/10.1016/j.celrep.2025.116079openalex-snapshot
The histone core domain evolves at single-residue resolution to directly orchestrate transcription
inferred← citeshttps://doi.org/10.1016/j.celrep.2026.117651openalex-snapshot
Yeast Rpd3L histone deacetylase couples nutrient shifts to genome-wide chromatin reprogramming
inferred← citeshttps://doi.org/10.1016/j.crad.2010.04.005openalex-snapshot
The biology underlying molecular imaging in oncology: from genome to anatome and back again
inferred← citeshttps://doi.org/10.1016/j.devcel.2011.09.008openalex-snapshot
Animal Transcription Networks as Highly Connected, Quantitative Continua
inferred← citeshttps://doi.org/10.1016/j.febslet.2011.05.001openalex-snapshot
The central role of RNA in human development and cognition
inferred← citeshttps://doi.org/10.1016/j.fertnstert.2011.12.036openalex-snapshot
Epigenetics of the male gamete
inferred← citeshttps://doi.org/10.1016/j.fgb.2010.07.009openalex-snapshot
Regulation of secondary metabolism by chromatin structure and epigenetic codes
inferred← citeshttps://doi.org/10.1016/j.gde.2012.12.009openalex-snapshot
Chromosomal domains: epigenetic contexts and functional implications of genomic compartmentalization
inferred← citeshttps://doi.org/10.1016/j.gene.2011.02.004openalex-snapshot
Computational analysis suggests a highly bendable, fragile structure for nucleosomal DNA
inferred← citeshttps://doi.org/10.1016/j.gene.2019.05.027openalex-snapshot
The dynamics and regulation of chromatin remodeling during spermiogenesis
inferred← citeshttps://doi.org/10.1016/j.heliyon.2023.e13684openalex-snapshot
RETRACTED: Recent advance of herbal medicines in cancer- a molecular approach
inferred← citeshttps://doi.org/10.1016/j.immuni.2011.11.010openalex-snapshot
Control of B Cell Development by the Histone H2A Deubiquitinase MYSM1
inferred← citeshttps://doi.org/10.1016/j.it.2011.06.012openalex-snapshot
Enhancer–promoter communication and transcriptional regulation of Igh
inferred← citeshttps://doi.org/10.1016/j.jbiosc.2014.02.004openalex-snapshot
Functional analysis of histone deacetylase and its role in stress response, drug resistance and solid-state cultivation in Aspergillus oryzae
inferred← citeshttps://doi.org/10.1016/j.jmb.2010.08.039openalex-snapshot
Crystal Structures of Nucleosome Core Particles Containing the ‘601’ Strong Positioning Sequence
inferred← citeshttps://doi.org/10.1016/j.jneuroim.2011.12.012openalex-snapshot
Exploring the role of the epigenome in multiple sclerosis: A window onto cell-specific transcriptional potential
inferred← citeshttps://doi.org/10.1016/j.jnutbio.2015.10.017openalex-snapshot
Early postnatal feed restriction reduces liver connective tissue levels and affects H3K9 acetylation state of regulated genes associated with protein metabolism in low birth weight pigs
inferred← citeshttps://doi.org/10.1016/j.jstrokecerebrovasdis.2021.105690openalex-snapshot
Epigenetics Mechanisms in Ischemic Stroke: A Promising Avenue?
inferred← citeshttps://doi.org/10.1016/j.jtbi.2014.08.006openalex-snapshot
Variation and constraints in species-specific promoter sequences
inferred← citeshttps://doi.org/10.1016/j.mce.2020.110788openalex-snapshot
Regulation of gene expression by growth hormone
inferred← citeshttps://doi.org/10.1016/j.molcel.2010.10.013openalex-snapshot
Analysis of Active and Inactive X Chromosome Architecture Reveals the Independent Organization of 30 nm and Large-Scale Chromatin Structures
inferred← citeshttps://doi.org/10.1016/j.molcel.2011.09.014openalex-snapshot
Regulation of Primary Response Genes
inferred← citeshttps://doi.org/10.1016/j.molcel.2012.05.008openalex-snapshot
Expression Noise and Acetylation Profiles Distinguish HDAC Functions
inferred← citeshttps://doi.org/10.1016/j.molcel.2012.07.008openalex-snapshot
Making a Noisy Gene: HDACs Turn Up the Static
inferred← citeshttps://doi.org/10.1016/j.molcel.2013.02.013openalex-snapshot
Occupying Chromatin: Polycomb Mechanisms for Getting to Genomic Targets, Stopping Transcriptional Traffic, and Staying Put
inferred← citeshttps://doi.org/10.1016/j.molcel.2014.01.010openalex-snapshot
The Catalytic Subunit of the SWR1 Remodeler Is a Histone Chaperone for the H2A.Z-H2B Dimer
inferred← citeshttps://doi.org/10.1016/j.molcel.2014.02.014openalex-snapshot
Nucleosomes Are Context-Specific, H2A.Z-Modulated Barriers to RNA Polymerase
inferred← citeshttps://doi.org/10.1016/j.molcel.2017.10.013openalex-snapshot
Determinants of Histone H3K4 Methylation Patterns
inferred← citeshttps://doi.org/10.1016/j.molcel.2018.07.017openalex-snapshot
Emerging Principles of Gene Expression Programs and Their Regulation
inferred← citeshttps://doi.org/10.1016/j.nbd.2010.02.005openalex-snapshot
Epigenetic mechanisms underlying human epileptic disorders and the process of epileptogenesis
inferred← citeshttps://doi.org/10.1016/j.neubiorev.2013.03.020openalex-snapshot
Epigenetic dynamics in psychiatric disorders: Environmental programming of neurodevelopmental processes
inferred← citeshttps://doi.org/10.1016/j.neuint.2019.104642openalex-snapshot
Epigenetic mechanisms of neurodegenerative diseases and acute brain injury
inferred← citeshttps://doi.org/10.1016/j.neuroscience.2011.12.024openalex-snapshot
Histone deacetylase 9 as a negative regulator for choline acetyltransferase gene in NG108-15 neuronal cells
inferred← citeshttps://doi.org/10.1016/j.neuroscience.2012.06.029openalex-snapshot
Epigenetic regulation of BACE1 in Alzheimer’s disease patients and in transgenic mice
inferred← citeshttps://doi.org/10.1016/j.plantsci.2016.06.006openalex-snapshot
ABI3 mediates dehydration stress recovery response in Arabidopsis thaliana by regulating expression of downstream genes
inferred← citeshttps://doi.org/10.1016/j.plantsci.2018.04.010openalex-snapshot
Gene expression and promoter characterization of heat-shock protein 90B gene (HSP90B) in the model unicellular green alga Chlamydomonas reinhardtii
inferred← citeshttps://doi.org/10.1016/j.plaphy.2018.06.030openalex-snapshot
The AtMYB44 promoter is accessible to signals that induce different chromatin modifications for gene transcription
inferred← citeshttps://doi.org/10.1016/j.sbi.2010.11.006openalex-snapshot
Nucleosome structural studies
inferred← citeshttps://doi.org/10.1016/j.sbi.2020.06.021openalex-snapshot
Nucleosome positioning and chromatin organization
inferred← citeshttps://doi.org/10.1016/j.smim.2015.02.004openalex-snapshot
Regulation of stimulus-inducible gene expression in myeloid cells
inferred← citeshttps://doi.org/10.1016/j.stress.2025.101189openalex-snapshot
Arabidopsis mutants for Mediator Head, Middle, Tail, and Kinase modules reveal distinct roles in regulating the transcriptional response to salt stress
inferred← citeshttps://doi.org/10.1016/j.tibs.2014.10.004openalex-snapshot
Transcribing through the nucleosome
inferred← citeshttps://doi.org/10.1016/j.tig.2009.11.002openalex-snapshot
A global view of genomic information – moving beyond the gene and the master regulator
inferred← citeshttps://doi.org/10.1016/j.tig.2011.04.002openalex-snapshot
Functional consequences of bidirectional promoters
inferred← citeshttps://doi.org/10.1016/j.tig.2013.06.006openalex-snapshot
Balancing chromatin remodeling and histone modifications in transcription
inferred← citeshttps://doi.org/10.1016/j.yexcr.2010.05.023openalex-snapshot
SWI/SNF complexes, chromatin remodeling and skeletal myogenesis: It's time to exchange!
inferred← citeshttps://doi.org/10.1016/j.yexcr.2011.09.016openalex-snapshot
FoxA1 and glucocorticoid receptor crosstalk via histone H4K16 acetylation at a hormone regulated enhancer
inferred← citeshttps://doi.org/10.1016/s2095-3119(13)60677-2openalex-snapshot
Characterization of the Promoter of a Homolog of Maize MADS-Box Gene m18
inferred← citeshttps://doi.org/10.1017/cbo9781139169349.004openalex-snapshot
The sperm epigenome: a role in embryogenesis and fetal health?
inferred← citeshttps://doi.org/10.1021/acs.biochem.2c00001openalex-snapshot
H1.0 C Terminal Domain Is Integral for Altering Transcription Factor Binding within Nucleosomes
inferred← citeshttps://doi.org/10.1021/acs.jpcb.6b06235openalex-snapshot
Single-Molecule Observation Reveals Spontaneous Protein Dynamics in the Nucleosome
inferred← citeshttps://doi.org/10.1021/acsnano.2c12755openalex-snapshot
Dam Assisted Fluorescent Tagging of Chromatin Accessibility (DAFCA) for Optical Genome Mapping in Nanochannel Arrays
inferred← citeshttps://doi.org/10.1021/jp912029mopenalex-snapshot
Fluorescence Dynamics of Double- and Single-Stranded DNA Bound to Histone and Micellar Surfaces
inferred← citeshttps://doi.org/10.1038/cr.2014.156openalex-snapshot
SUVR2 is involved in transcriptional gene silencing by associating with SNF2-related chromatin-remodeling proteins in Arabidopsis
inferred← citeshttps://doi.org/10.1038/emboj.2009.346openalex-snapshot
Multilayered control of gene expression by stress‐activated protein kinases
inferred← citeshttps://doi.org/10.1038/emboj.2010.71openalex-snapshot
Chromatin density and splicing destiny: on the cross‐talk between chromatin structure and splicing
inferred← citeshttps://doi.org/10.1038/emboj.2011.210openalex-snapshot
DNA methylation status predicts cell type‐specific enhancer activity
inferred← citeshttps://doi.org/10.1038/emboj.2011.391openalex-snapshot
Signal‐dependent incorporation of MyoD–BAF60c into Brg1‐based SWI/SNF chromatin‐remodelling complex
inferred← citeshttps://doi.org/10.1038/emboj.2013.194openalex-snapshot
Gene promoters dictate histone occupancy within genes
inferred← citeshttps://doi.org/10.1038/embor.2012.31openalex-snapshot
Transcription goes digital
inferred← citeshttps://doi.org/10.1038/embor.2013.158openalex-snapshot
Nucleosome sliding by Chd1 does not require rigid coupling between DNA‐binding and ATPase domains
inferred← citeshttps://doi.org/10.1038/nature10215openalex-snapshot
Structure and mechanism of the Swi2/Snf2 remodeller Mot1 in complex with its substrate TBP
inferred← citeshttps://doi.org/10.1038/nature12974openalex-snapshot
Two independent transcription initiation codes overlap on vertebrate core promoters
inferred← citeshttps://doi.org/10.1038/nature16505openalex-snapshot
Genome-wide nucleosome specificity and function of chromatin remodellers in ES cells
inferred← citeshttps://doi.org/10.1038/nbt.1685openalex-snapshot
Epigenetic modifications and human disease
inferred← citeshttps://doi.org/10.1038/ncb3187openalex-snapshot
Reconstitution of mitotic chromatids with a minimum set of purified factors
inferred← citeshttps://doi.org/10.1038/ncomms10152openalex-snapshot
Linker histone H1 and H3K56 acetylation are antagonistic regulators of nucleosome dynamics
inferred← citeshttps://doi.org/10.1038/ncomms12958openalex-snapshot
H2A.Z controls the stability and mobility of nucleosomes to regulate expression of the LH genes
inferred← citeshttps://doi.org/10.1038/ng.3833openalex-snapshot
Chromatin-remodeling factor SMARCD2 regulates transcriptional networks controlling differentiation of neutrophil granulocytes
inferred← citeshttps://doi.org/10.1038/nrg2765openalex-snapshot
Insulators and promoters: closer than we think
inferred← citeshttps://doi.org/10.1038/nrg2781openalex-snapshot
Inducible gene expression: diverse regulatory mechanisms
inferred← citeshttps://doi.org/10.1038/nrg3484openalex-snapshot
Eukaryotic transcriptional dynamics: from single molecules to cell populations
inferred← citeshttps://doi.org/10.1038/nrm2861openalex-snapshot
Histone variants — ancient wrap artists of the epigenome
inferred← citeshttps://doi.org/10.1038/nrm3036openalex-snapshot
Open chromatin in pluripotency and reprogramming
inferred← citeshttps://doi.org/10.1038/nsmb.2723openalex-snapshot
Transcription-generated torsional stress destabilizes nucleosomes
inferred← citeshttps://doi.org/10.1038/onc.2013.162openalex-snapshot
DNA methylation determines nucleosome occupancy in the 5′-CpG islands of tumor suppressor genes
inferred← citeshttps://doi.org/10.1038/oncsis.2016.89openalex-snapshot
Context-dependent role for chromatin remodeling component PBRM1/BAF180 in clear cell renal cell carcinoma
inferred← citeshttps://doi.org/10.1038/s41467-018-03677-zopenalex-snapshot
Structural rearrangements of the histone octamer translocate DNA
inferred← citeshttps://doi.org/10.1038/s41467-019-14217-8openalex-snapshot
Eukaryotic transcription factors can track and control their target genes using DNA antennas
inferred← citeshttps://doi.org/10.1038/s41467-020-15274-0openalex-snapshot
Distinct roles for H4 and H2A.Z acetylation in RNA transcription in African trypanosomes
inferred← citeshttps://doi.org/10.1038/s41467-021-22688-xopenalex-snapshot
Multiple roles of H2A.Z in regulating promoter chromatin architecture in human cells
inferred← citeshttps://doi.org/10.1038/s41576-023-00630-9openalex-snapshot
Regulation of the RNA polymerase II pre-initiation complex by its associated coactivators
inferred← citeshttps://doi.org/10.1038/s41594-024-01451-yopenalex-snapshot
Single-molecule analysis of transcription activation: dynamics of SAGA coactivator recruitment
inferred← citeshttps://doi.org/10.1038/s41598-017-08239-9openalex-snapshot
The Candida albicans HIR histone chaperone regulates the yeast-to-hyphae transition by controlling the sensitivity to morphogenesis signals
inferred← citeshttps://doi.org/10.1038/srep20319openalex-snapshot
Role of transcription factor-mediated nucleosome disassembly in PHO5 gene expression
inferred← citeshttps://doi.org/10.1039/c3mb70311hopenalex-snapshot
The structural properties of DNA regulate gene expression
inferred← citeshttps://doi.org/10.1039/c6mb00729eopenalex-snapshot
Random positioning of nucleosomes enhances heritable bistability
inferred← citeshttps://doi.org/10.1039/c9cc07511aopenalex-snapshot
Quantifying the binding between proteins and open chromatin-like DNA sequences with gold nanorods
inferred← citeshttps://doi.org/10.1042/bj20110791openalex-snapshot
The histone variant H2A.Z interconverts two stable epigenetic chromatin states
inferred← citeshttps://doi.org/10.1042/bse0480063openalex-snapshot
Nucleosome dynamics and epigenetic stability
inferred← citeshttps://doi.org/10.1042/bst20110636openalex-snapshot
Immediate-early gene activation by the MAPK pathways: what do and don't we know?
inferred← citeshttps://doi.org/10.1042/bst20210773openalex-snapshot
Acidic patch histone mutations and their effects on nucleosome remodeling
inferred← citeshttps://doi.org/10.1073/pnas.1002360107openalex-snapshot
Transcriptional activation in the context of repression mediated by archaeal histones
inferred← citeshttps://doi.org/10.1073/pnas.1013148108openalex-snapshot
Exploring transcription regulation through cell-to-cell variability
inferred← citeshttps://doi.org/10.1073/pnas.1100210108openalex-snapshot
Gene clustering pattern, promoter architecture, and gene expression stability in eukaryotic genomes
inferred← citeshttps://doi.org/10.1073/pnas.1111309108openalex-snapshot
OCT4 establishes and maintains nucleosome-depleted regions that provide additional layers of epigenetic regulation of its target genes
inferred← citeshttps://doi.org/10.1073/pnas.1116819108openalex-snapshot
Direct regulation of nucleosome density by the conserved AAA-ATPase Yta7
inferred← citeshttps://doi.org/10.1073/pnas.1207169109openalex-snapshot
Transgenerational epigenetic effects of the Apobec1 cytidine deaminase deficiency on testicular germ cell tumor susceptibility and embryonic viability
inferred← citeshttps://doi.org/10.1073/pnas.1210887110openalex-snapshot
Fitness landscape for nucleosome positioning
inferred← citeshttps://doi.org/10.1073/pnas.1314905110openalex-snapshot
Structural insights into the histone H1-nucleosome complex
inferred← citeshttps://doi.org/10.1073/pnas.1400517111openalex-snapshot
Single-cell nucleosome mapping reveals the molecular basis of gene expression heterogeneity
inferred← citeshttps://doi.org/10.1073/pnas.1518090112openalex-snapshot
Mapping of histone modifications in episomal HBV cccDNA uncovers an unusual chromatin organization amenable to epigenetic manipulation
inferred← citeshttps://doi.org/10.1074/jbc.m110.148718openalex-snapshot
Activator-dependent p300 Acetylation of Chromatin in Vitro
inferred← citeshttps://doi.org/10.1074/jbc.m110.152421openalex-snapshot
The Unique Transcriptional Activation Domain of Nuclear Factor-I-X3 Is Critical to Specifically Induce Marker Gene Expression in Astrocytes
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