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A CRISPR/Cas system mediates bacterial innate immune evasion and virulence

https://doi.org/10.1038/nature12048

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/s10096-012-1733-4openalex-snapshot

A novel link between Campylobacter jejuni bacteriophage defence, virulence and Guillain–Barré syndrome

inferredcites →https://doi.org/10.1016/j.cell.2009.07.040openalex-snapshot

RNA-Guided RNA Cleavage by a CRISPR RNA-Cas Protein Complex

inferredcites →https://doi.org/10.1016/j.tig.2010.05.008openalex-snapshot

Self-targeting by CRISPR: gene regulation or autoimmunity?

inferredcites →https://doi.org/10.1016/s0580-9517(02)31020-1openalex-snapshot

19 Studying trafficking of intracellular pathogens in antigen-presenting cells

inferredcites →https://doi.org/10.1038/nature09523openalex-snapshot

The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA

inferredcites →https://doi.org/10.1038/nature09886openalex-snapshot

CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III

inferredcites →https://doi.org/10.1038/ncomms1937openalex-snapshot

Molecular memory of prior infections activates the CRISPR/Cas adaptive bacterial immunity system

inferredcites →https://doi.org/10.1038/nrmicro2577openalex-snapshot

Evolution and classification of the CRISPR–Cas systems

inferredcites →https://doi.org/10.1073/pnas.1208507109openalex-snapshot

Cas9–crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria

inferredcites →https://doi.org/10.1111/j.1365-2958.2010.07465.xopenalex-snapshot

A dual function of the CRISPR–Cas system in bacterial antivirus immunity and DNA repair

inferredcites →https://doi.org/10.1111/j.1365-2958.2011.07546.xopenalex-snapshot

Characterization of DsbD in Neisseria meningitidis

inferredcites →https://doi.org/10.1111/j.1462-5822.2012.01816.xopenalex-snapshot

Repression of bacterial lipoprotein production by Francisella novicida facilitates evasion of innate immune recognition

inferredcites →https://doi.org/10.1126/science.1138140openalex-snapshot

CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes

inferredcites →https://doi.org/10.1126/science.1165771openalex-snapshot

CRISPR Interference Limits Horizontal Gene Transfer in Staphylococci by Targeting DNA

inferredcites →https://doi.org/10.1126/science.1225829openalex-snapshot

A Programmable Dual-RNA–Guided DNA Endonuclease in Adaptive Bacterial Immunity

inferredcites →https://doi.org/10.1126/science.285.5428.732openalex-snapshot

Host Defense Mechanisms Triggered by Microbial Lipoproteins Through Toll-Like Receptors

inferredcites →https://doi.org/10.1126/science.285.5428.736openalex-snapshot

Cell Activation and Apoptosis by Bacterial Lipoproteins Through Toll-like Receptor-2

inferredcites →https://doi.org/10.1128/iai.01250-06openalex-snapshot

Identification of MglA-Regulated Genes Reveals Novel Virulence Factors in Francisella tularensis

inferredcites →https://doi.org/10.1128/iai.02030-05openalex-snapshot

Toll-Like Receptor 2 Is Required for Control of Pulmonary Infection withFrancisella tularensis

inferredcites →https://doi.org/10.1128/jb.00797-08openalex-snapshot

Interaction between Bacteriophage DMS3 and Host CRISPR Region Inhibits Group Behaviors ofPseudomonas aeruginosa

inferredcites →https://doi.org/10.1128/jb.01188-08openalex-snapshot

Genetic Dissection of the Francisella novicida Restriction Barrier

inferredcites →https://doi.org/10.1128/jb.175.18.5899-5906.1993openalex-snapshot

Nonpolar mutagenesis of the ipa genes defines IpaB, IpaC, and IpaD as effectors of Shigella flexneri entry into epithelial cells

inferredcites →https://doi.org/10.1128/jcm.4.1.71-81.1976openalex-snapshot

Genetic Transformation as a tool for detection of Neisseria gonorrhoeae

inferredcites →https://doi.org/10.1128/mmbr.05027-11openalex-snapshot

Subversion of Host Recognition and Defense Systems by Francisella spp

inferredcites →https://doi.org/10.1146/annurev-genet-110410-132430openalex-snapshot

CRISPR-Cas Systems in Bacteria and Archaea: Versatile Small RNAs for Adaptive Defense and Regulation

inferredcites →https://doi.org/10.1186/1471-2164-11-625openalex-snapshot

Identification of small RNAs in Francisella tularensis

inferredcites →https://doi.org/10.1186/1745-6150-6-38openalex-snapshot

Unification of Cas protein families and a simple scenario for the origin and evolution of CRISPR-Cas systems

inferredcites →https://doi.org/10.1261/rna.2167605openalex-snapshot

Arginine-rich motifs present multiple interfaces for specific binding by RNA

inferredcites →https://doi.org/10.1371/journal.pone.0007920openalex-snapshot

TLR–Dependent Control of Francisella tularensis Infection and Host Inflammatory Responses

inferredcites →https://doi.org/10.1371/journal.pone.0013244openalex-snapshot

Rational Design of a Plasmid Origin That Replicates Efficiently in Both Gram-Positive and Gram-Negative Bacteria

inferredcites →https://doi.org/10.1371/journal.pone.0024201openalex-snapshot

Macrophage Replication Screen Identifies a Novel Francisella Hydroperoxide Resistance Protein Involved in Virulence

inferredcites →https://doi.org/10.1371/journal.pone.0041999openalex-snapshot

Identification of a Novel Small RNA Modulating Francisella tularensis Pathogenicity

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Omics Technology for Plant Stress Management

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Trimeric autotransporter adhesins contribute to Actinobacillus pleuropneumoniae pathogenicity in mice and regulate bacterial gene expression during interactions between bacteria and porcine primary alveolar macrophages

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inferred← citeshttps://doi.org/10.1016/j.cell.2014.02.001openalex-snapshot

Crystal Structure of Cas9 in Complex with Guide RNA and Target DNA

inferred← citeshttps://doi.org/10.1016/j.cell.2016.01.039openalex-snapshot

Structure and Engineering of Francisella novicida Cas9

inferred← citeshttps://doi.org/10.1016/j.cell.2016.02.054openalex-snapshot

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inferred← citeshttps://doi.org/10.1016/j.cell.2020.12.017openalex-snapshot

A natural single-guide RNA repurposes Cas9 to autoregulate CRISPR-Cas expression

inferred← citeshttps://doi.org/10.1016/j.celrep.2017.11.100openalex-snapshot

RNA-Independent DNA Cleavage Activities of Cas9 and Cas12a

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RNA Binding and HEPN-Nuclease Activation Are Decoupled in CRISPR-Cas13a

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The roles of CRISPR–Cas systems in adaptive immunity and beyond

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Recent advances in therapeutic recruitment of mammalian RNAi and bacterial CRISPR-Cas DNA interference pathways as emerging antiviral strategies

inferred← citeshttps://doi.org/10.1016/j.gene.2022.146244openalex-snapshot

Assembly of Cas7 subunits of Leptospira on the mature crRNA of CRISPR-Cas I-B is modulated by divalent ions

inferred← citeshttps://doi.org/10.1016/j.genrep.2018.10.004openalex-snapshot

CRISPR-Cas system in regulation of immunity and virulence of bacterial pathogens

inferred← citeshttps://doi.org/10.1016/j.ijmm.2015.08.037openalex-snapshot

Identification and characterization of episomal forms of integrative genomic islands in the genus Francisella

inferred← citeshttps://doi.org/10.1016/j.jbc.2024.107295openalex-snapshot

Unity among the diverse RNA-guided CRISPR-Cas interference mechanisms

inferred← citeshttps://doi.org/10.1016/j.jip.2026.108755openalex-snapshot

Mechanisms underlying host-specific horizontal transfer of shrimp AHPND virulence plasmid: Vibrio immunity and colonization environment

inferred← citeshttps://doi.org/10.1016/j.jmb.2018.08.030openalex-snapshot

CRISPR–Cas: Complex Functional Networks and Multiple Roles beyond Adaptive Immunity

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The significance of bioengineered nanoplatforms against SARS-CoV-2: From detection to genome editing

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Development of a DNA double-strand break-free base editing tool in Corynebacterium glutamicum for genome editing and metabolic engineering

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Survival and evasion of Neisseria meningitidis from macrophages

inferred← citeshttps://doi.org/10.1016/j.meegid.2013.07.017openalex-snapshot

Uropathogenic Escherichia coli are less likely than paired fecal E. coli to have CRISPR loci

inferred← citeshttps://doi.org/10.1016/j.meegid.2015.10.019openalex-snapshot

The effect of Mycobacterium tuberculosis CRISPR-associated Cas2 (Rv2816c) on stress response genes expression, morphology and macrophage survival of Mycobacterium smegmatis

inferred← citeshttps://doi.org/10.1016/j.meegid.2017.06.027openalex-snapshot

Investigating CRISPR-Cas systems in Clostridium botulinum via bioinformatics tools

inferred← citeshttps://doi.org/10.1016/j.meegid.2018.01.027openalex-snapshot

The truncated Rv2820c of Mycobacterium tuberculosis Beijing family augments intracellular survival of M. smegmatis by altering cytokine profile and inhibiting NO generation

inferred← citeshttps://doi.org/10.1016/j.mib.2013.12.001openalex-snapshot

Impact of CRISPR immunity on the emergence and virulence of bacterial pathogens

inferred← citeshttps://doi.org/10.1016/j.mib.2014.02.007openalex-snapshot

Gene regulation by engineered CRISPR-Cas systems

inferred← citeshttps://doi.org/10.1016/j.mib.2014.05.015openalex-snapshot

Bacterial sensing of bacteriophages in communities: the search for the Rosetta stone

inferred← citeshttps://doi.org/10.1016/j.mib.2021.11.012openalex-snapshot

Clostridioides difficile – phage relationship the RNA way

inferred← citeshttps://doi.org/10.1016/j.micinf.2015.03.011openalex-snapshot

Filifactor alocis – a new emerging periodontal pathogen

inferred← citeshttps://doi.org/10.1016/j.micpath.2019.103551openalex-snapshot

CRISPR technology to combat plant RNA viruses: A theoretical model for Potato virus Y (PVY) resistance

inferred← citeshttps://doi.org/10.1016/j.micpath.2019.103706openalex-snapshot

Cas9 regulated gene expression and pathogenicity in Riemerella anatipestifer

inferred← citeshttps://doi.org/10.1016/j.micpath.2021.105306openalex-snapshot

Research on the drug resistance mechanism of foodborne pathogens

inferred← citeshttps://doi.org/10.1016/j.micpath.2024.107151openalex-snapshot

Role of CRISPR-cas system on virulence traits and carbapenem resistance in clinical Klebsiella pneumoniae isolates

inferred← citeshttps://doi.org/10.1016/j.micres.2022.127000openalex-snapshot

CRISPR Cas system: A strategic approach in detection of nucleic acids

inferred← citeshttps://doi.org/10.1016/j.molcel.2013.05.001openalex-snapshot

Processing-Independent CRISPR RNAs Limit Natural Transformation in Neisseria meningitidis

inferred← citeshttps://doi.org/10.1016/j.molcel.2014.03.011openalex-snapshot

CRISPR-Cas Systems: Prokaryotes Upgrade to Adaptive Immunity

inferred← citeshttps://doi.org/10.1016/j.molcel.2015.10.008openalex-snapshot

Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems

inferred← citeshttps://doi.org/10.1016/j.molcel.2018.01.025openalex-snapshot

Programmable RNA Cleavage and Recognition by a Natural CRISPR-Cas9 System from Neisseria meningitidis

inferred← citeshttps://doi.org/10.1016/j.molcel.2018.01.032openalex-snapshot

CRISPR RNA-Dependent Binding and Cleavage of Endogenous RNAs by the Campylobacter jejuni Cas9

inferred← citeshttps://doi.org/10.1016/j.molcel.2018.09.018openalex-snapshot

CRISPR-Based Technologies: Impact of RNA-Targeting Systems

inferred← citeshttps://doi.org/10.1016/j.molcel.2019.05.029openalex-snapshot

Catalytically Active Cas9 Mediates Transcriptional Interference to Facilitate Bacterial Virulence

inferred← citeshttps://doi.org/10.1016/j.parint.2016.08.011openalex-snapshot

Application of the CRISPR/Cas9 gene editing technique to research on functional genomes of parasites

inferred← citeshttps://doi.org/10.1016/j.plrev.2013.12.011openalex-snapshot

CRISPR–Cas adaptive immunity and developments in CRISPR–Cas applications

inferred← citeshttps://doi.org/10.1016/j.pmpp.2018.05.006openalex-snapshot

CRISPR/Cas system as an emerging technology to enhance plant viral immunity

inferred← citeshttps://doi.org/10.1016/j.preteyeres.2022.101110openalex-snapshot

RNA-targeting strategies as a platform for ocular gene therapy

inferred← citeshttps://doi.org/10.1016/j.rser.2017.01.028openalex-snapshot

Genome engineering for breaking barriers in lignocellulosic bioethanol production

inferred← citeshttps://doi.org/10.1016/j.saa.2022.121476openalex-snapshot

A sensitive and facile microRNA detection based on CRISPR-Cas12a coupled with strand displacement amplification

inferred← citeshttps://doi.org/10.1016/j.sbi.2015.02.002openalex-snapshot

The structural biology of CRISPR-Cas systems

inferred← citeshttps://doi.org/10.1016/j.semcdb.2019.05.003openalex-snapshot

CRISPR-Cas9 directed genome engineering for enhancing salt stress tolerance in rice

inferred← citeshttps://doi.org/10.1016/j.synbio.2020.09.003openalex-snapshot

Applications of phage-derived RNA-based technologies in synthetic biology

inferred← citeshttps://doi.org/10.1016/j.talanta.2023.124582openalex-snapshot

CRISPR/Cas13a-triggered Cas12a biosensing method for ultrasensitive and specific miRNA detection

inferred← citeshttps://doi.org/10.1016/j.tcb.2013.10.003openalex-snapshot

Guest list or black list: heritable small RNAs as immunogenic memories

inferred← citeshttps://doi.org/10.1016/j.tcb.2016.08.004openalex-snapshot

Applications of CRISPR Genome Engineering in Cell Biology

inferred← citeshttps://doi.org/10.1016/j.tibtech.2017.06.004openalex-snapshot

Beyond Native Cas9: Manipulating Genomic Information and Function

inferred← citeshttps://doi.org/10.1016/j.tim.2013.09.001openalex-snapshot

RNA-dependent DNA endonuclease Cas9 of the CRISPR system: Holy Grail of genome editing?

inferred← citeshttps://doi.org/10.1016/j.tim.2014.01.007openalex-snapshot

To acquire or resist: the complex biological effects of CRISPR–Cas systems

inferred← citeshttps://doi.org/10.1016/j.tim.2016.01.005openalex-snapshot

Harnessing the Prokaryotic Adaptive Immune System as a Eukaryotic Antiviral Defense

inferred← citeshttps://doi.org/10.1016/j.tim.2017.04.005openalex-snapshot

Antiviral Goes Viral: Harnessing CRISPR/Cas9 to Combat Viruses in Humans

inferred← citeshttps://doi.org/10.1016/j.vetmic.2024.110301openalex-snapshot

Type I-E CRISPR-Cas system regulates fimZY and T3SS1 genes expression in Salmonella enterica serovar Pullorum

inferred← citeshttps://doi.org/10.1016/j.virusres.2017.01.003openalex-snapshot

Advances with using CRISPR/Cas-mediated gene editing to treat infections with hepatitis B virus and hepatitis C virus

inferred← citeshttps://doi.org/10.1016/j.ygeno.2017.08.002openalex-snapshot

In silico identification and characterization of stress and virulence associated repeats in Salmonella

inferred← citeshttps://doi.org/10.1016/j.ymeth.2019.05.003openalex-snapshot

CRISPR/Cas9-based epigenome editing: An overview of dCas9-based tools with special emphasis on off-target activity

inferred← citeshttps://doi.org/10.1016/j.ymthe.2020.09.028openalex-snapshot

CRISPR-Cas9: A Preclinical and Clinical Perspective for the Treatment of Human Diseases

inferred← citeshttps://doi.org/10.1021/acs.analchem.3c04363openalex-snapshot

CRISPR-Powered Strategies for Amplification-Free Diagnostics of Infectious Diseases

inferred← citeshttps://doi.org/10.1021/acs.biochem.1c00354openalex-snapshot

Coordinated Actions of Cas9 HNH and RuvC Nuclease Domains Are Regulated by the Bridge Helix and the Target DNA Sequence

inferred← citeshttps://doi.org/10.1021/acs.biochem.8b01241openalex-snapshot

Bridge Helix of Cas9 Modulates Target DNA Cleavage and Mismatch Tolerance

inferred← citeshttps://doi.org/10.1021/acs.chemrev.6b00799openalex-snapshot

CRISPR/Cas9-Based Genome Editing for Disease Modeling and Therapy: Challenges and Opportunities for Nonviral Delivery

inferred← citeshttps://doi.org/10.1021/acsagscitech.1c00279openalex-snapshot

CRISPR/Cas: The New Frontier in Plant Improvement

inferred← citeshttps://doi.org/10.1021/acschembio.7b00855openalex-snapshot

Type II-C CRISPR-Cas9 Biology, Mechanism, and Application

inferred← citeshttps://doi.org/10.1038/cr.2016.135openalex-snapshot

Type I CRISPR-Cas targets endogenous genes and regulates virulence to evade mammalian host immunity

inferred← citeshttps://doi.org/10.1038/cr.2017.6openalex-snapshot

CRISPR control of virulence in Pseudomonas aeruginosa

inferred← citeshttps://doi.org/10.1038/emboj.2013.141openalex-snapshot

CRISPRs extending their reach: prokaryotic RNAi protein Cas9 recruited for gene regulation

inferred← citeshttps://doi.org/10.1038/nature13769openalex-snapshot

Programmable RNA recognition and cleavage by CRISPR/Cas9

inferred← citeshttps://doi.org/10.1038/nature15386openalex-snapshot

CRISPR-Cas immunity in prokaryotes

inferred← citeshttps://doi.org/10.1038/nmicrobiol.2017.92openalex-snapshot

A decade of discovery: CRISPR functions and applications

inferred← citeshttps://doi.org/10.1038/nprot.2013.132openalex-snapshot

CRISPR interference (CRISPRi) for sequence-specific control of gene expression

inferred← citeshttps://doi.org/10.1038/nprot.2014.157openalex-snapshot

Genome editing in rice and wheat using the CRISPR/Cas system

inferred← citeshttps://doi.org/10.1038/nri.2017.78openalex-snapshot

Mechanisms and consequences of diversity-generating immune strategies

inferred← citeshttps://doi.org/10.1038/nrmicro3241openalex-snapshot

CRISPR–Cas systems: beyond adaptive immunity

inferred← citeshttps://doi.org/10.1038/s41368-019-0063-0openalex-snapshot

Filamentation initiated by Cas2 and its association with the acquisition process in cells

inferred← citeshttps://doi.org/10.1038/s41396-020-0623-5openalex-snapshot

The CRISPR-Cas systems were selectively inactivated during evolution of Bacillus cereus group for adaptation to diverse environments

inferred← citeshttps://doi.org/10.1038/s41467-022-31330-3openalex-snapshot

Mucin induces CRISPR-Cas defense in an opportunistic pathogen

inferred← citeshttps://doi.org/10.1038/s41467-024-47713-7openalex-snapshot

Insights into the inhibition of protospacer integration via direct interaction between Cas2 and AcrVA5

inferred← citeshttps://doi.org/10.1038/s41467-025-57455-9openalex-snapshot

Insights into the compact CRISPR–Cas9d system

inferred← citeshttps://doi.org/10.1038/s41467-026-77062-6openalex-snapshot

MtvS1 and MtvS2 Interact with RNA polymerase to regulate the Francisella type V-A CRISPR-Cas system

inferred← citeshttps://doi.org/10.1038/s41564-018-0175-xopenalex-snapshot

CRISPR still needs microbiologists

inferred← citeshttps://doi.org/10.1038/s41579-021-00663-zopenalex-snapshot

Alternative functions of CRISPR–Cas systems in the evolutionary arms race

inferred← citeshttps://doi.org/10.1038/s41580-019-0131-5openalex-snapshot

The next generation of CRISPR–Cas technologies and applications

inferred← citeshttps://doi.org/10.1038/s41586-026-10166-7openalex-snapshot

Exapted CRISPR–Cas12f homologues drive RNA-guided transcription

inferred← citeshttps://doi.org/10.1038/s41586-026-10178-3openalex-snapshot

Structural basis of RNA-guided transcription by a dCas12f–σE–RNAP complex

inferred← citeshttps://doi.org/10.1038/s41598-017-02456-yopenalex-snapshot

An episomal vector-based CRISPR/Cas9 system for highly efficient gene knockout in human pluripotent stem cells

inferred← citeshttps://doi.org/10.1038/s41598-019-49110-3openalex-snapshot

Efficient generation of Knock-in/Knock-out marmoset embryo via CRISPR/Cas9 gene editing

inferred← citeshttps://doi.org/10.1038/s41598-021-94577-8openalex-snapshot

Manipulation of the Tyrosinase gene permits improved CRISPR/Cas editing and neural imaging in cichlid fish

inferred← citeshttps://doi.org/10.1038/s44318-026-00769-1openalex-snapshot

A leader-repeat hairpin blocks extraneous CRISPR RNA production in diverse CRISPR-Cas13 systems

inferred← citeshttps://doi.org/10.1038/srep04738openalex-snapshot

Chromosomal DNA deletion confers phage resistance to Pseudomonas aeruginosa

inferred← citeshttps://doi.org/10.1038/srep31644openalex-snapshot

Imipenem represses CRISPR-Cas interference of DNA acquisition through H-NS stimulation in Klebsiella pneumoniae

inferred← citeshttps://doi.org/10.1039/c7mb00279copenalex-snapshot

Functional roles of intrinsic disorder in CRISPR-associated protein Cas9

inferred← citeshttps://doi.org/10.1042/bsr20200127openalex-snapshot

Gene editing and CRISPR in the clinic: current and future perspectives

inferred← citeshttps://doi.org/10.1042/bst20130127openalex-snapshot

Are bacteriophage defence and virulence two sides of the same coin in Campylobacter jejuni?

inferred← citeshttps://doi.org/10.1042/bst20130163openalex-snapshot

Cas9-dependent endogenous gene regulation is required for bacterial virulence

inferred← citeshttps://doi.org/10.1051/jbio/2018001openalex-snapshot

Historique de la découverte des systèmes CRISPR-Cas

inferred← citeshttps://doi.org/10.1073/pnas.1323025111openalex-snapshot

A CRISPR-Cas system enhances envelope integrity mediating antibiotic resistance and inflammasome evasion

inferred← citeshttps://doi.org/10.1073/pnas.1411883111openalex-snapshot

Functional genomics of Lactobacillus casei establishment in the gut

inferred← citeshttps://doi.org/10.1073/pnas.1422340112openalex-snapshot

Cas9-mediated targeting of viral RNA in eukaryotic cells

inferred← citeshttps://doi.org/10.1074/jbc.m114.564625openalex-snapshot

Characterization of Genomic Deletion Efficiency Mediated by Clustered Regularly Interspaced Palindromic Repeats (CRISPR)/Cas9 Nuclease System in Mammalian Cells*

inferred← citeshttps://doi.org/10.1080/15476286.2018.1460994openalex-snapshot

The nuts and bolts of the Haloferax CRISPR-Cas system I-B

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