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Nonsense-mediated mRNA decay: an intricate machinery that shapes transcriptomes

https://doi.org/10.1038/nrm4063
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/bies.201300156openalex-snapshot
The functional consequences of intron retention: Alternative splicing coupled to NMD as a regulator of gene expression
inferredcites →https://doi.org/10.1002/bies.201500007openalex-snapshot
Nonsense‐mediated RNA decay – a switch and dial for regulating gene expression
inferredcites →https://doi.org/10.1002/emmm.201303347openalex-snapshot
The unfolded protein response affects readthrough of premature termination codons
inferredcites →https://doi.org/10.1002/wrna.1126openalex-snapshot
Mechanisms and implications of programmed translational frameshifting
inferredcites →https://doi.org/10.1002/wrna.1168openalex-snapshot
Staufen‐mediated mRNA decay
inferredcites →https://doi.org/10.1007/978-0-387-77374-2_12openalex-snapshot
The Coupling of Alternative Splicing and Nonsense-Mediated mRNA Decay
inferredcites →https://doi.org/10.1007/978-1-4614-4800-6openalex-snapshot
Molecular Genetic Pathology
inferredcites →https://doi.org/10.1007/978-1-59745-405-6openalex-snapshot
Molecular Genetic Pathology
inferredcites →https://doi.org/10.1016/j.bbagrm.2013.02.005openalex-snapshot
Nonsense-mediated mRNA decay — Mechanisms of substrate mRNA recognition and degradation in mammalian cells
inferredcites →https://doi.org/10.1016/j.biocel.2013.04.020openalex-snapshot
A perspective on mammalian upstream open reading frame function
inferredcites →https://doi.org/10.1016/j.biochi.2015.01.007openalex-snapshot
Selenocysteine incorporation: A trump card in the game of mRNA decay
inferredcites →https://doi.org/10.1016/j.ceb.2008.01.013openalex-snapshot
Reprogramming mRNA translation during stress
inferredcites →https://doi.org/10.1016/j.cell.2008.02.030openalex-snapshot
Upf1 Phosphorylation Triggers Translational Repression during Nonsense-Mediated mRNA Decay
inferredcites →https://doi.org/10.1016/j.cell.2010.10.005openalex-snapshot
Upf1 Senses 3′UTR Length to Potentiate mRNA Decay
inferredcites →https://doi.org/10.1016/j.cell.2010.11.043openalex-snapshot
Upf1 ATPase-Dependent mRNP Disassembly Is Required for Completion of Nonsense- Mediated mRNA Decay
inferredcites →https://doi.org/10.1016/j.cell.2012.10.007openalex-snapshot
The Cellular EJC Interactome Reveals Higher-Order mRNP Structure and an EJC-SR Protein Nexus
inferredcites →https://doi.org/10.1016/j.cell.2013.04.056openalex-snapshot
Regulation of Axon Guidance by Compartmentalized Nonsense-Mediated mRNA Decay
inferredcites →https://doi.org/10.1016/j.cell.2013.05.019openalex-snapshot
This Message Will Self-Destruct: NMD Regulates Axon Guidance
inferredcites →https://doi.org/10.1016/j.cell.2013.06.052openalex-snapshot
Orchestrated Intron Retention Regulates Normal Granulocyte Differentiation
inferredcites →https://doi.org/10.1016/j.celrep.2014.01.028openalex-snapshot
Posttranscriptional Control of the Stem Cell and Neurogenic Programs by the Nonsense-Mediated RNA Decay Pathway
inferredcites →https://doi.org/10.1016/j.celrep.2014.08.020openalex-snapshot
The RNA Helicase DHX34 Activates NMD by Promoting a Transition from the Surveillance to the Decay-Inducing Complex
inferredcites →https://doi.org/10.1016/j.celrep.2014.09.012openalex-snapshot
3′ UTR Length and Messenger Ribonucleoprotein Composition Determine Endocleavage Efficiencies at Termination Codons
inferredcites →https://doi.org/10.1016/j.molcel.2004.10.013openalex-snapshot
SMG7 Acts as a Molecular Link between mRNA Surveillance and mRNA Decay
inferredcites →https://doi.org/10.1016/j.molcel.2005.08.012openalex-snapshot
Exon-Junction Complex Components Specify Distinct Routes of Nonsense-Mediated mRNA Decay with Differential Cofactor Requirements
inferredcites →https://doi.org/10.1016/j.molcel.2007.06.030openalex-snapshot
Communication with the Exon-Junction Complex and Activation of Nonsense-Mediated Decay by Human Upf Proteins Occur in the Cytoplasm
inferredcites →https://doi.org/10.1016/j.molcel.2008.11.022openalex-snapshot
Human Proline-Rich Nuclear Receptor Coregulatory Protein 2 Mediates an Interaction between mRNA Surveillance Machinery and Decapping Complex
inferredcites →https://doi.org/10.1016/j.molcel.2011.02.010openalex-snapshot
Molecular Mechanisms for the RNA-Dependent ATPase Activity of Upf1 and Its Regulation by Upf2
inferredcites →https://doi.org/10.1016/j.molcel.2011.04.018openalex-snapshot
Identification of a MicroRNA that Activates Gene Expression by Repressing Nonsense-Mediated RNA Decay
inferredcites →https://doi.org/10.1016/j.molcel.2011.06.031openalex-snapshot
RNA Homeostasis Governed by Cell Type-Specific and Branched Feedback Loops Acting on NMD
inferredcites →https://doi.org/10.1016/j.molcel.2014.03.017openalex-snapshot
MOV10 Is a 5′ to 3′ RNA Helicase Contributing to UPF1 mRNA Target Degradation by Translocation along 3′ UTRs
inferredcites →https://doi.org/10.1016/j.mrrev.2014.05.001openalex-snapshot
Nonsense-mediated decay in genetic disease: Friend or foe?
inferredcites →https://doi.org/10.1016/j.str.2012.09.009openalex-snapshot
Structural Basis of the PNRC2-Mediated Link between mRNA Surveillance and Decapping
inferredcites →https://doi.org/10.1016/j.str.2014.05.015openalex-snapshot
Structures of SMG1-UPFs Complexes: SMG1 Contributes to Regulate UPF2-Dependent Activation of UPF1 in NMD
inferredcites →https://doi.org/10.1016/j.tig.2011.11.001openalex-snapshot
mRNP quality control goes regulatory
inferredcites →https://doi.org/10.1016/s0092-8674(00)00214-2openalex-snapshot
Human Upf Proteins Target an mRNA for Nonsense-Mediated Decay When Bound Downstream of a Termination Codon
inferredcites →https://doi.org/10.1016/s0968-0004(98)01208-0openalex-snapshot
A rule for termination-codon position within intron-containing genes: when nonsense affects RNA abundance
inferredcites →https://doi.org/10.1016/s1074-7613(00)80466-5openalex-snapshot
Nonsense Surveillance in Lymphocytes?
inferredcites →https://doi.org/10.1016/s1097-2765(00)80122-7openalex-snapshot
Circularization of mRNA by Eukaryotic Translation Initiation Factors
inferredcites →https://doi.org/10.1016/s1097-2765(03)00142-4openalex-snapshot
Y14 and hUpf3b Form an NMD-Activating Complex
inferredcites →https://doi.org/10.1016/s1097-2765(03)00443-xopenalex-snapshot
Phosphorylation of hUPF1 Induces Formation of mRNA Surveillance Complexes Containing hSMG-5 and hSMG-7
inferredcites →https://doi.org/10.1016/s1097-2765(03)00502-1openalex-snapshot
Autoregulation of Polypyrimidine Tract Binding Protein by Alternative Splicing Leading to Nonsense-Mediated Decay
inferredcites →https://doi.org/10.1038/emboj.2008.17openalex-snapshot
Interactions between UPF1, eRFs, PABP and the exon junction complex suggest an integrated model for mammalian NMD pathways
inferredcites →https://doi.org/10.1038/emboj.2009.175openalex-snapshot
Unusual bipartite mode of interaction between the nonsense‐mediated decay factors, UPF1 and UPF2
inferredcites →https://doi.org/10.1038/embor.2009.200openalex-snapshot
Upf1 stimulates degradation of the product derived from aberrant messenger RNA containing a specific nonsense mutation by the proteasome
inferredcites →https://doi.org/10.1038/mp.2011.163openalex-snapshot
Transcriptome profiling of UPF3B/NMD-deficient lymphoblastoid cells from patients with various forms of intellectual disability
inferredcites →https://doi.org/10.1038/nature02559openalex-snapshot
Nonsense-mediated messenger RNA decay is initiated by endonucleolytic cleavage in Drosophila
inferredcites →https://doi.org/10.1038/nature03060openalex-snapshot
A faux 3′-UTR promotes aberrant termination and triggers nonsense- mediated mRNA decay
inferredcites →https://doi.org/10.1038/nature05676openalex-snapshot
Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements
inferredcites →https://doi.org/10.1038/nature06974openalex-snapshot
Translation factors promote the formation of two states of the closed-loop mRNP
inferredcites →https://doi.org/10.1038/nature13429openalex-snapshot
Ribosomal frameshifting in the CCR5 mRNA is regulated by miRNAs and the NMD pathway
inferredcites →https://doi.org/10.1038/ng1403openalex-snapshot
Nonsense-mediated decay approaches the clinic
inferredcites →https://doi.org/10.1038/ng1429openalex-snapshot
Nonsense surveillance regulates expression of diverse classes of mammalian transcripts and mutes genomic noise
inferredcites →https://doi.org/10.1038/ng2100openalex-snapshot
Mutations in UPF3B, a member of the nonsense-mediated mRNA decay complex, cause syndromic and nonsyndromic mental retardation
inferredcites →https://doi.org/10.1038/nm.3620openalex-snapshot
Intracellular calcium regulates nonsense-mediated mRNA decay
inferredcites →https://doi.org/10.1038/nrm3454openalex-snapshot
NMD: a multifaceted response to premature translational termination
inferredcites →https://doi.org/10.1038/nsmb.1530openalex-snapshot
SMG6 promotes endonucleolytic cleavage of nonsense mRNA in human cells
inferredcites →https://doi.org/10.1038/nsmb.2287openalex-snapshot
The cryo-EM structure of the UPF–EJC complex shows UPF1 poised toward the RNA 3′ end
inferredcites →https://doi.org/10.1038/nsmb.2420openalex-snapshot
CLIP-seq of eIF4AIII reveals transcriptome-wide mapping of the human exon junction complex
inferredcites →https://doi.org/10.1038/nsmb.2575openalex-snapshot
Nonsense-mediated mRNA decay occurs during eIF4F-dependent translation in human cells
inferredcites →https://doi.org/10.1038/nsmb.2576openalex-snapshot
eIF4E-bound mRNPs are substrates for nonsense-mediated mRNA decay in mammalian cells
inferredcites →https://doi.org/10.1038/nsmb.2635openalex-snapshot
Translation-dependent displacement of UPF1 from coding sequences causes its enrichment in 3′ UTRs
inferredcites →https://doi.org/10.1038/nsmb1016openalex-snapshot
Concerted action of poly(A) nucleases and decapping enzyme in mammalian mRNA turnover
inferredcites →https://doi.org/10.1038/nsmb1081openalex-snapshot
EJC-independent degradation of nonsense immunoglobulin-μ mRNA depends on 3′ UTR length
inferredcites →https://doi.org/10.1038/nsmb972openalex-snapshot
Regulated degradation of replication-dependent histone mRNAs requires both ATR and Upf1
inferredcites →https://doi.org/10.1038/onc.2014.352openalex-snapshot
Stress-induced inhibition of nonsense-mediated RNA decay regulates intracellular cystine transport and intracellular glutathione through regulation of the cystine/glutamate exchanger SLC7A11
inferredcites →https://doi.org/10.1038/sj.ejhg.5201649openalex-snapshot
Nonsense-mediated mRNA decay modulates clinical outcome of genetic disease
inferredcites →https://doi.org/10.1038/sj.emboj.7601377openalex-snapshot
Structures of the PIN domains of SMG6 and SMG5 reveal a nuclease within the mRNA surveillance complex
inferredcites →https://doi.org/10.1038/sj.emboj.7601588openalex-snapshot
A conserved role for cytoplasmic poly(A)‐binding protein 1 (PABPC1) in nonsense‐mediated mRNA decay
inferredcites →https://doi.org/10.1038/sj.emboj.7601628openalex-snapshot
An alternative branch of the nonsense‐mediated decay pathway
inferredcites →https://doi.org/10.1042/bst20120052openalex-snapshot
UPF1 involvement in nuclear functions
inferredcites →https://doi.org/10.1073/pnas.0400541101openalex-snapshot
Reinitiation involving upstream ORFs regulates ATF4 mRNA translation in mammalian cells
inferredcites →https://doi.org/10.1073/pnas.1007336107openalex-snapshot
Smg1 is required for embryogenesis and regulates diverse genes via alternative splicing coupled to nonsense-mediated mRNA decay
inferredcites →https://doi.org/10.1073/pnas.1219908110openalex-snapshot
Rules that govern UPF1 binding to mRNA 3′ UTRs
inferredcites →https://doi.org/10.1074/jbc.274.24.16677openalex-snapshot
The Eukaryotic Polypeptide Chain Releasing Factor (eRF3/GSPT) Carrying the Translation Termination Signal to the 3′-Poly(A) Tail of mRNA
inferredcites →https://doi.org/10.1074/jbc.m110.168872openalex-snapshot
Post-transcriptional Defects of Antioxidant Selenoenzymes Cause Oxidative Stress under Methylmercury Exposure
inferredcites →https://doi.org/10.1074/jbc.m113.460691openalex-snapshot
The Upf Factor Complex Interacts with Aberrant Products Derived from mRNAs Containing a Premature Termination Codon and Facilitates Their Proteasomal Degradation
inferredcites →https://doi.org/10.1074/jbc.m405024200openalex-snapshot
Nonsense Mutations in Close Proximity to the Initiation Codon Fail to Trigger Full Nonsense-mediated mRNA Decay
inferredcites →https://doi.org/10.1083/jcb.200611086openalex-snapshot
Inhibition of nonsense-mediated mRNA decay (NMD) by a new chemical molecule reveals the dynamic of NMD factors in P-bodies
inferredcites →https://doi.org/10.1083/jcb.201311103openalex-snapshot
Protecting the proteome: Eukaryotic cotranslational quality control pathways
inferredcites →https://doi.org/10.1093/emboj/19.24.6860openalex-snapshot
The spliceosome deposits multiple proteins 20–24 nucleotides upstream of mRNA exon–exon junctions
inferredcites →https://doi.org/10.1093/emboj/20.17.4987openalex-snapshot
The exon–exon junction complex provides a binding platform for factors involved in mRNA export and nonsense‐mediated mRNA decay
inferredcites →https://doi.org/10.1093/emboj/20.4.880openalex-snapshot
The role of Upf proteins in modulating the translation read‐through of nonsense‐containing transcripts
inferredcites →https://doi.org/10.1093/emboj/20.7.1785openalex-snapshot
SC35 autoregulates its expression by promoting splicing events that destabilize its mRNAs
inferredcites →https://doi.org/10.1093/emboj/cdg056openalex-snapshot
SMG‐5, required for C.elegans nonsense‐mediated mRNA decay, associates with SMG‐2 and protein phosphatase 2A
inferredcites →https://doi.org/10.1093/hmg/10.2.99openalex-snapshot
Rent1, a trans-effector of nonsense-mediated mRNA decay, is essential for mammalian embryonic viability
inferredcites →https://doi.org/10.1093/hmg/ddt035openalex-snapshot
Contribution of copy number variants involving nonsense-mediated mRNA decay pathway genes to neuro-developmental disorders
inferredcites →https://doi.org/10.1093/hmg/ddt315openalex-snapshot
The UPF3B gene, implicated in intellectual disability, autism, ADHD and childhood onset schizophrenia regulates neural progenitor cell behaviour and neuronal outgrowth
inferredcites →https://doi.org/10.1093/nar/gkr820openalex-snapshot
Interaction of PABPC1 with the translation initiation complex is critical to the NMD resistance of AUG-proximal nonsense mutations
inferredcites →https://doi.org/10.1093/nar/gks1222openalex-snapshot
SMG5–PNRC2 is functionally dominant compared with SMG5–SMG7 in mammalian nonsense-mediated mRNA decay
inferredcites →https://doi.org/10.1093/nar/gks1320openalex-snapshot
Tight intramolecular regulation of the human Upf1 helicase by its N- and C-terminal domains
inferredcites →https://doi.org/10.1093/nar/gku1258openalex-snapshot
Identification of SMG6 cleavage sites and a preferred RNA cleavage motif by global analysis of endogenous NMD targets in human cells
inferredcites →https://doi.org/10.1101/cshperspect.a013706openalex-snapshot
The Elongation, Termination, and Recycling Phases of Translation in Eukaryotes
inferredcites →https://doi.org/10.1101/gad.12.11.1665openalex-snapshot
The surveillance complex interacts with the translation release factors to enhance termination and degrade aberrant mRNAs
inferredcites →https://doi.org/10.1101/gad.1262905openalex-snapshot
Mammalian poly(A)-binding protein is a eukaryotic translation initiation factor, which acts via multiple mechanisms
inferredcites →https://doi.org/10.1101/gad.1389006openalex-snapshot
Binding of a novel SMG-1–Upf1–eRF1–eRF3 complex (SURF) to the exon junction complex triggers Upf1 phosphorylation and nonsense-mediated mRNA decay
inferredcites →https://doi.org/10.1101/gad.1525507openalex-snapshot
Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay
inferredcites →https://doi.org/10.1101/gad.1717309openalex-snapshot
SMD and NMD are competitive pathways that contribute to myogenesis: effects on PAX3 and myogenin mRNAs
inferredcites →https://doi.org/10.1101/gad.1767209openalex-snapshot
SMG-8 and SMG-9, two novel subunits of the SMG-1 complex, regulate remodeling of the mRNA surveillance complex during nonsense-mediated mRNA decay
inferredcites →https://doi.org/10.1101/gad.226951.113openalex-snapshot
The SMG5–SMG7 heterodimer directly recruits the CCR4–NOT deadenylase complex to mRNAs containing nonsense codons via interaction with POP2
inferredcites →https://doi.org/10.1101/gad.245506.114openalex-snapshot
A post-translational regulatory switch on UPF1 controls targeted mRNA degradation
inferredcites →https://doi.org/10.1101/gad.246538.114openalex-snapshot
Human nonsense-mediated RNA decay initiates widely by endonucleolysis and targets snoRNA host genes
inferredcites →https://doi.org/10.1101/gad.468808openalex-snapshot
NMD is essential for hematopoietic stem and progenitor cells and for eliminating by-products of programmed DNA rearrangements
inferredcites →https://doi.org/10.1101/gad.606911openalex-snapshot
The nonsense-mediated mRNA decay SMG-1 kinase is regulated by large-scale conformational changes controlled by SMG-8
inferredcites →https://doi.org/10.1101/gad.913001openalex-snapshot
Human SMG-1, a novel phosphatidylinositol 3-kinase-related protein kinase, associates with components of the mRNA surveillance complex and is involved in the regulation of nonsense-mediated mRNA decay
inferredcites →https://doi.org/10.1101/gr.157354.113openalex-snapshot
Global analyses of UPF1 binding and function reveal expanded scope of nonsense-mediated mRNA decay
inferredcites →https://doi.org/10.1101/gr.177790.114openalex-snapshot
Widespread intron retention in mammals functionally tunes transcriptomes
inferredcites →https://doi.org/10.1101/sqb.2010.75.028openalex-snapshot
CBP80-Promoted mRNP Rearrangements during the Pioneer Round of Translation, Nonsense-Mediated mRNA Decay, and Thereafter
inferredcites →https://doi.org/10.1126/science.1062786openalex-snapshot
Communication of the Position of Exon-Exon Junctions to the mRNA Surveillance Machinery by the Protein RNPS1
inferredcites →https://doi.org/10.1126/science.1062829openalex-snapshot
Role of the Nonsense-Mediated Decay Factor hUpf3 in the Splicing-Dependent Exon-Exon Junction Complex
inferredcites →https://doi.org/10.1128/mcb.00361-08openalex-snapshot
Regulation of Multiple Core Spliceosomal Proteins by Alternative Splicing-Coupled Nonsense-Mediated mRNA Decay
inferredcites →https://doi.org/10.1128/mcb.02284-07openalex-snapshot
Hypoxic Inhibition of Nonsense-Mediated RNA Decay Regulates Gene Expression and the Integrated Stress Response
inferredcites →https://doi.org/10.1128/mcb.05704-11openalex-snapshot
Inhibition of Nonsense-Mediated RNA Decay by the Tumor Microenvironment Promotes Tumorigenesis
inferredcites →https://doi.org/10.1128/mcb.05987-11openalex-snapshot
A Novel Role for hSMG-1 in Stress Granule Formation
inferredcites →https://doi.org/10.1128/mcb.16.10.5477openalex-snapshot
Genetic and Biochemical Characterization of Mutations in the ATPase and Helicase Regions of the Upf1 Protein
inferredcites →https://doi.org/10.1128/mcb.21.1.209-223.2001openalex-snapshot
Identification and Characterization of Human Orthologues to Saccharomyces cerevisiae Upf2 Protein and Upf3 Protein (Caenorhabditis elegans SMG-4)
inferredcites →https://doi.org/10.1128/mcb.22.10.3301-3315.2002openalex-snapshot
Poly(A)-Binding Protein Acts in Translation Termination via Eukaryotic Release Factor 3 Interaction and Does Not Influence [ PSI + ] Propagation
inferredcites →https://doi.org/10.1128/mcb.26.4.1272-1287.2006openalex-snapshot
hUPF2 Silencing Identifies Physiologic Substrates of Mammalian Nonsense-Mediated mRNA Decay
inferredcites →https://doi.org/10.1146/annurev-genet-111212-133424openalex-snapshot
Organizing Principles of Mammalian Nonsense-Mediated mRNA Decay
inferredcites →https://doi.org/10.1155/2013/358015openalex-snapshot
Growth Arrest on Inhibition of Nonsense-Mediated Decay Is Mediated by Noncoding RNA GAS5
inferredcites →https://doi.org/10.1186/gb-2009-10-9-r101openalex-snapshot
High resolution transcriptome maps for wild-type and nonsense-mediated decay-defective Caenorhabditis elegans
inferredcites →https://doi.org/10.1186/gb-2012-13-5-r35openalex-snapshot
Mammalian tissues defective in nonsense-mediated mRNA decay display highly aberrant splicing patterns
inferredcites →https://doi.org/10.1261/rna.030247.111openalex-snapshot
Autoregulation of the nonsense-mediated mRNA decay pathway in human cells
inferredcites →https://doi.org/10.1261/rna.038893.113openalex-snapshot
Comparison of EJC-enhanced and EJC-independent NMD in human cells reveals two partially redundant degradation pathways
inferredcites →https://doi.org/10.1261/rna.043463.113openalex-snapshot
Nonsense-mediated decay factors are involved in the regulation of selenoprotein mRNA levels during selenium deficiency
inferredcites →https://doi.org/10.1261/rna.044933.114openalex-snapshot
The interaction of cytoplasmic poly(A)-binding protein with eukaryotic initiation factor 4G suppresses nonsense-mediated mRNA decay
inferredcites →https://doi.org/10.1261/rna.048637.114openalex-snapshot
Identification of elements in human long 3′ UTRs that inhibit nonsense-mediated decay
inferredcites →https://doi.org/10.1261/rna.1386208openalex-snapshot
SMG6 is the catalytic endonuclease that cleaves mRNAs containing nonsense codons in metazoan
inferredcites →https://doi.org/10.1261/rna.177606openalex-snapshot
Crystal structure of the UPF2-interacting domain of nonsense-mediated mRNA decay factor UPF1
inferredcites →https://doi.org/10.1261/rna.2401811openalex-snapshot
Mechanism of escape from nonsense-mediated mRNA decay of human β-globin transcripts with nonsense mutations in the first exon
inferredcites →https://doi.org/10.1261/rna.2528811openalex-snapshot
SNORD-host RNA Zfas1 is a regulator of mammary development and a potential marker for breast cancer
inferredcites →https://doi.org/10.1261/rna.536308openalex-snapshot
Upf1 potentially serves as a RING-related E3 ubiquitin ligase via its association with Upf3 in yeast
inferredcites →https://doi.org/10.1261/rna.815108openalex-snapshot
Proximity of the poly(A)-binding protein to a premature termination codon inhibits mammalian nonsense-mediated mRNA decay
inferredcites →https://doi.org/10.1371/journal.pbio.0060092openalex-snapshot
Posttranscriptional Gene Regulation by Spatial Rearrangement of the 3′ Untranslated Region
inferredcites →https://doi.org/10.1371/journal.pbio.0060111openalex-snapshot
A Competition between Stimulators and Antagonists of Upf Complex Recruitment Governs Human Nonsense-Mediated mRNA Decay
inferredcites →https://doi.org/10.1371/journal.pone.0010169openalex-snapshot
Molecular Basis of eRF3 Recognition by the MLLE Domain of Poly(A)-Binding Protein
inferredcites →https://doi.org/10.1371/journal.pone.0011650openalex-snapshot
UPF2 Is a Critical Regulator of Liver Development, Function and Regeneration
inferredcites →https://doi.org/10.1371/journal.pone.0055684openalex-snapshot
The RNA Degradation Pathway Regulates the Function of GAS5 a Non-Coding RNA in Mammalian Cells
inferredcites →https://doi.org/10.1371/journal.pone.0104391openalex-snapshot
Eukaryotic Initiation Factor 4G Suppresses Nonsense-Mediated mRNA Decay by Two Genetically Separable Mechanisms
inferredcites →https://doi.org/10.15252/embj.201489947openalex-snapshot
Smg6/Est1 licenses embryonic stem cell differentiation via nonsense‐mediated mRNA decay
inferredcites →https://doi.org/10.15252/embr.201439696openalex-snapshot
The unfolded protein response is shaped by the NMD pathway
inferredcites →https://doi.org/10.3945/an.110.000240openalex-snapshot
Selenium Regulation of the Selenoprotein and Nonselenoprotein Transcriptomes in Rodents
inferredcites →https://doi.org/10.4161/rna.22360openalex-snapshot
Identification of hundreds of novel UPF1 target transcripts by direct determination of whole transcriptome stability
inferredcites →https://doi.org/10.4161/rna.34406openalex-snapshot
Proteins involved in the degradation of cytoplasmic mRNA in the major eukaryotic model systems
inferredcites →https://doi.org/10.5582/ddt.2012.v6.2.55openalex-snapshot
Up-frameshift protein 1 (UPF1): Multitalented entertainer in RNA decay
inferredcites →https://doi.org/10.7554/elife.06722openalex-snapshot
Quality control of transcription start site selection by nonsense-mediated-mRNA decay

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.3936776openalex-extracted
HTATSF1-Nucleated PARylation and Phosphorylation Cascade Dictates Homologous Recombination and Modulates Chemotherapeutic Response of Breast Carcinoma
inferred← citeshttps://doi.org/10.1001/jamaneurol.2018.2941openalex-snapshot
Identification of a Loss-of-Function Mutation in the Context of Glutaminase Deficiency and Neonatal Epileptic Encephalopathy
inferred← citeshttps://doi.org/10.1002/1873-3468.12639openalex-snapshot
The alternative life of RNA —sequencing meets single molecule approaches
inferred← citeshttps://doi.org/10.1002/1878-0261.13343openalex-snapshot
SMG1 , a nonsense‐mediated mRNA decay ( NMD ) regulator, as a candidate therapeutic target in multiple myeloma
inferred← citeshttps://doi.org/10.1002/9780470015902.a0005981.pub2openalex-snapshot
mRNA Turnover
inferred← citeshttps://doi.org/10.1002/9780470015902.a0022433.pub2openalex-snapshot
Nonsense Mutations Causing Inherited Diseases: Therapeutic Approaches
inferred← citeshttps://doi.org/10.1002/9781119860914.ch18openalex-snapshot
The Emerging Roles of LIS 1 Biomechanics in Cellular and Cortical Homeostasis
inferred← citeshttps://doi.org/10.1002/9781119860914.ch28openalex-snapshot
Posttranscriptional Control of Brain Development
inferred← citeshttps://doi.org/10.1002/9783527688104.ch7openalex-snapshot
Splicing and Alternative Splicing Impact on Gene Design
inferred← citeshttps://doi.org/10.1002/acr2.11770openalex-snapshot
Altered Protein Structures and Neoepitopes in Lupus Neutrophils From Dysregulated Splicing of Messenger RNA
inferred← citeshttps://doi.org/10.1002/advs.202417578openalex-snapshot
GbSER02 Interacts With GhVOZ1 to Promote Fiber Elongation by Modulating Gibberellin Synthesis in Cotton
inferred← citeshttps://doi.org/10.1002/advs.202519563openalex-snapshot
Selenoprotein H Functions as a PPARα Coactivator to Link Selenium Homeostasis to Hepatic Lipid Metabolism and Protect against Steatohepatitis
inferred← citeshttps://doi.org/10.1002/ajmg.a.37566openalex-snapshot
A de novo frameshift mutation in chromodomain helicase DNA‐binding domain 8 (CHD8): A case report and literature review
inferred← citeshttps://doi.org/10.1002/ajmg.a.61743openalex-snapshot
A homozygous variant in growth and differentiation factor 2 ( GDF2 ) may cause lymphatic dysplasia with hydrothorax and nonimmune hydrops fetalis
inferred← citeshttps://doi.org/10.1002/ajmg.a.64168openalex-snapshot
Growth Hormone Treatment in Patients With KBG Syndrome: Novel Insights, Challenges and Recommendations From Six New Patients and Literature Review
inferred← citeshttps://doi.org/10.1002/ajmg.b.32905openalex-snapshot
Functional characterization of the schizophrenia associated gene AS3MT identifies a role in neuronal development
inferred← citeshttps://doi.org/10.1002/bies.201600100openalex-snapshot
Exaptive origins of regulated mRNA decay in eukaryotes
inferred← citeshttps://doi.org/10.1002/bies.201700170openalex-snapshot
RNA Decay Factor UPF1 Promotes Protein Decay: A Hidden Talent
inferred← citeshttps://doi.org/10.1002/cbf.70119openalex-snapshot
mRNA Fate in Human Cells; Degradation and Subcellular Localisation
inferred← citeshttps://doi.org/10.1002/ccr3.5124openalex-snapshot
A novel nonsense variant in MED12 associated with malformations in a female fetus
inferred← citeshttps://doi.org/10.1002/dvdy.24579openalex-snapshot
Gonadal soma controls ovarian follicle proliferation through Gsdf in zebrafish
inferred← citeshttps://doi.org/10.1002/eji.202250037openalex-snapshot
IRF8 regulates efficacy of therapeutic anti‐CD20 monoclonal antibodies
inferred← citeshttps://doi.org/10.1002/eji.202250261openalex-snapshot
The G allele of SNP rs3922 reduces the binding affinity between IGF2BP3 and CXCR5 correlating with a lower antibody production
inferred← citeshttps://doi.org/10.1002/epi4.12353openalex-snapshot
A novel homozygous KCNQ3 loss‐of‐function variant causes non‐syndromic intellectual disability and neonatal‐onset pharmacodependent epilepsy
inferred← citeshttps://doi.org/10.1002/gcc.22541openalex-snapshot
Prognostic value of chromosomal imbalances, gene mutations, and BAP1 expression in uveal melanoma
inferred← citeshttps://doi.org/10.1002/gcc.22983openalex-snapshot
Loss of smarcad1a accelerates tumorigenesis of malignant peripheral nerve sheath tumors in zebrafish
inferred← citeshttps://doi.org/10.1002/hep4.1702openalex-snapshot
STE20‐Type Protein Kinase MST4 Controls NAFLD Progression by Regulating Lipid Droplet Dynamics and Metabolic Stress in Hepatocytes
inferred← citeshttps://doi.org/10.1002/humu.23186openalex-snapshot
Filamin B Loss-of-Function Mutation in Dimerization Domain Causes Autosomal-Recessive Spondylocarpotarsal Synostosis Syndrome with Rib Anomalies
inferred← citeshttps://doi.org/10.1002/humu.23392openalex-snapshot
Alu element insertion inPKLRgene as a novel cause of pyruvate kinase deficiency in Middle Eastern patients
inferred← citeshttps://doi.org/10.1002/humu.23563openalex-snapshot
Further delineation of Malan syndrome
inferred← citeshttps://doi.org/10.1002/humu.23706openalex-snapshot
Aberrant RNA splicing is the major pathogenic effect in a knock‐in mouse model of the dominantly inherited c.1430A>G humanRPE65mutation
inferred← citeshttps://doi.org/10.1002/humu.23821openalex-snapshot
First estimate of the scale of canonical 5′ splice site GT>GC variants capable of generating wild‐type transcripts
inferred← citeshttps://doi.org/10.1002/humu.23970openalex-snapshot
Further delineation of putative ACTB loss‐of‐function variants: A 4‐patient series
inferred← citeshttps://doi.org/10.1002/humu.24245openalex-snapshot
Further evidence for de novo variants in SYNCRIP as the cause of a neurodevelopmental disorder
inferred← citeshttps://doi.org/10.1002/imt2.70171openalex-snapshot
Deciphering transcriptome complexity via long‐read sequencing
inferred← citeshttps://doi.org/10.1002/iub.70018openalex-snapshot
Therapeutic Potential of Translational Readthrough at Disease‐Associated Premature Termination Codons From Tumor Suppressor Genes
inferred← citeshttps://doi.org/10.1002/jcla.23418openalex-snapshot
Identification of a nonsense mutation in TNNI3K associated with cardiac conduction disease
inferred← citeshttps://doi.org/10.1002/jcla.23968openalex-snapshot
Identification of a novel EXT2 frameshift mutation in a family with hereditary multiple exostoses by whole‐exome sequencing
inferred← citeshttps://doi.org/10.1002/jha2.70194openalex-snapshot
Novel Nonsense Mutation in SMARCD2 Gene Results in Dysplasia of All Myeloid Cell Lines
inferred← citeshttps://doi.org/10.1002/jimd.12807openalex-snapshot
Exploring RNA therapeutics for urea cycle disorders
inferred← citeshttps://doi.org/10.1002/jmv.71031openalex-snapshot
Epigenetic Regulation of the Epstein–Barr Virus Latent–Lytic Switch
inferred← citeshttps://doi.org/10.1002/mgg3.1410openalex-snapshot
A novel TSC1 frameshift mutation c.1550_1551del causes tuberous sclerosis complex by aberrant splicing and nonsense‐mediated mRNA degradation (NMD) simultaneously in a Chinese family
inferred← citeshttps://doi.org/10.1002/mgg3.323openalex-snapshot
Compound heterozygous CASQ 2 mutations and long‐term course of catecholaminergic polymorphic ventricular tachycardia
inferred← citeshttps://doi.org/10.1002/mgg3.70030openalex-snapshot
Pathogenicity of the LDLR c. 97C> T (p. Gln33Ter ) Mutation in Familial Hypercholesterolemia
inferred← citeshttps://doi.org/10.1002/mgg3.70261openalex-snapshot
Heart Transplant for Noncompaction Cardiomyopathy in NONO ‐Related Syndromic Intellectual Disability
inferred← citeshttps://doi.org/10.1002/pmic.201600123openalex-snapshot
Meet the neighbors: Mapping local protein interactomes by proximity‐dependent labeling with BioID
inferred← citeshttps://doi.org/10.1002/pmic.202300361openalex-snapshot
Regulation of non‐canonical proteins from diverse origins through the nonsense‐mediated mRNA decay pathway
inferred← citeshttps://doi.org/10.1002/pro.4624openalex-snapshot
A splicing variant of EDS1 from Vitis vinifera forms homodimers but no heterodimers with PAD4
inferred← citeshttps://doi.org/10.1002/pro.70155openalex-snapshot
A quantitative comparison of the deleteriousness of missense and nonsense mutations using the structurally resolved human protein interactome
inferred← citeshttps://doi.org/10.1002/ps.70398openalex-snapshot
The occurrence of intron retention on Bx‐pel‐2 gene enhanced the cell wall degrading ability of Bursaphelenchus xylophilus
inferred← citeshttps://doi.org/10.1002/wrna.1357openalex-snapshot
Nonsense‐mediated mRNA decay: novel mechanistic insights and biological impact
inferred← citeshttps://doi.org/10.1002/wrna.1411openalex-snapshot
The exon junction complex: a lifelong guardian of mRNA fate
inferred← citeshttps://doi.org/10.1002/wrna.1416openalex-snapshot
mRNA localization as a rheostat to regulate subcellular gene expression
inferred← citeshttps://doi.org/10.1002/wrna.1418openalex-snapshot
Microexons: discovery, regulation, and function
inferred← citeshttps://doi.org/10.1002/wrna.1449openalex-snapshot
Endonuclease Regnase‐1/ Monocyte chemotactic protein‐1‐induced protein‐1 (MCPIP1 ) in controlling immune responses and beyond
inferred← citeshttps://doi.org/10.1002/wrna.1519openalex-snapshot
The DDX5/Dbp2 subfamily of DEAD‐box RNA helicases
inferred← citeshttps://doi.org/10.1002/wrna.1522openalex-snapshot
On the edge of degradation: Autophagy regulation by RNA decay
inferred← citeshttps://doi.org/10.1002/wrna.1560openalex-snapshot
How to get away with nonsense: Mechanisms and consequences of escape from nonsense‐mediated RNA decay
inferred← citeshttps://doi.org/10.1002/wrna.1853openalex-snapshot
Rules and impacts of nonsense‐mediated mRNA decay in the degradation of long noncoding RNAs
inferred← citeshttps://doi.org/10.1007/16833_2024_404openalex-snapshot
Implementing CRISPR/Cas9 into the Study of Anticancer Drug Resistance
inferred← citeshttps://doi.org/10.1007/978-1-0716-2569-9_5openalex-snapshot
A CRISPR/Cas9-Based Toolkit to Test Gain- and Loss-of-Gene Function in Brain Organoids
inferred← citeshttps://doi.org/10.1007/978-1-0716-2788-4_4openalex-snapshot
Development of a Cellular Model Mimicking Specific HDAC Inhibitors
inferred← citeshttps://doi.org/10.1007/978-1-0716-4290-0_20openalex-snapshot
ncRNA Editing: Functional Characterization and Computational Resources
inferred← citeshttps://doi.org/10.1007/978-1-0716-4446-1_5openalex-snapshot
Prime Editing of Mouse Primary Neurons
inferred← citeshttps://doi.org/10.1007/978-1-4939-7540-2_14openalex-snapshot
Generation of Cell Lines Stably Expressing a Fluorescent Reporter of Nonsense-Mediated mRNA Decay Activity
inferred← citeshttps://doi.org/10.1007/978-1-4939-7540-2_16openalex-snapshot
Studying Nonsense-Mediated mRNA Decay in Mammalian Cells Using a Multicolored Bioluminescence-Based Reporter System
inferred← citeshttps://doi.org/10.1007/978-1-4939-8982-9_6openalex-snapshot
ncRNA Editing: Functional Characterization and Computational Resources
inferred← citeshttps://doi.org/10.1007/978-3-030-19966-1_3openalex-snapshot
Nonsense-Mediated mRNA Decay in Development, Stress and Cancer
inferred← citeshttps://doi.org/10.1007/978-3-030-71612-7_8openalex-snapshot
Regulation of RNA Stability Through RNA Modification
inferred← citeshttps://doi.org/10.1007/978-3-031-52197-3_8openalex-snapshot
Cystic Fibrosis Transmembrane Conductance Regulator (CFTR)-Targeted Therapeutics for Cystic Fibrosis
inferred← citeshttps://doi.org/10.1007/978-981-10-4310-9_9openalex-snapshot
Specific Increase of Protein Levels by Enhancing Translation Using Antisense Oligonucleotides Targeting Upstream Open Frames
inferred← citeshttps://doi.org/10.1007/978-981-13-2218-1_14openalex-snapshot
Modeling Hereditary Spastic Paraplegias in Fruit Flies: Potential of Its Genetic Paraphernalia
inferred← citeshttps://doi.org/10.1007/978-981-15-2445-5_13openalex-snapshot
Visualizing Codon Usage Within and Across Genomes: Concepts and Tools
inferred← citeshttps://doi.org/10.1007/s00018-021-03809-7openalex-snapshot
Nonsense suppression therapies in human genetic diseases
inferred← citeshttps://doi.org/10.1007/s00122-024-04626-9openalex-snapshot
Identification of a candidate gene for the I locus determining the dominant white bulb color in onion (Allium cepa L.)
inferred← citeshttps://doi.org/10.1007/s00294-016-0615-1openalex-snapshot
LncRNAs, lost in translation or licence to regulate?
inferred← citeshttps://doi.org/10.1007/s00299-025-03697-2openalex-snapshot
Alternative splicing of BrTFL2 resulted in early bolting in Chinese cabbage
inferred← citeshttps://doi.org/10.1007/s00415-017-8710-xopenalex-snapshot
Mutations outside the N-terminal part of RBCK1 may cause polyglucosan body myopathy with immunological dysfunction: expanding the genotype–phenotype spectrum
inferred← citeshttps://doi.org/10.1007/s00424-020-02404-2openalex-snapshot
Epileptic channelopathies caused by neuronal Kv7 (KCNQ) channel dysfunction
inferred← citeshttps://doi.org/10.1007/s00424-026-03221-9openalex-snapshot
Differential alternative splicing in skeletal muscle after 14 days immobilization-induced atrophy in young men
inferred← citeshttps://doi.org/10.1007/s00428-025-04227-xopenalex-snapshot
Correlation between TP53 mutational status and digital quantification of p53 immunohistochemistry in mantle cell lymphoma
inferred← citeshttps://doi.org/10.1007/s00436-022-07578-5openalex-snapshot
Acanthamoeba castellanii exhibits intron retention during encystment
inferred← citeshttps://doi.org/10.1007/s10048-024-00789-1openalex-snapshot
Three Iranian patients with rare subtypes of hereditary spastic paraplegia (HSP): SPG76, SPG56, and SPG69
inferred← citeshttps://doi.org/10.1007/s10384-020-00732-5openalex-snapshot
A founder Alu insertion in RP1 gene in Japanese patients with retinitis pigmentosa
inferred← citeshttps://doi.org/10.1007/s10620-018-5171-8openalex-snapshot
Dysregulated Up-Frameshift Protein 1 Promotes Ulcerative Colitis Pathogenesis Through the TNFR1-NF-κB/MAPKs Pathway
inferred← citeshttps://doi.org/10.1007/s10787-026-02282-7openalex-snapshot
In vitro ibuprofen has gene regulatory and anti-inflammatory properties in peripheral blood mononuclear cells of individuals with infection-provoked neurodevelopmental disorders
inferred← citeshttps://doi.org/10.1007/s11033-022-07211-9openalex-snapshot
The edited UPF1 is correlated with elevated asparagine synthetase in pancreatic ductal adenocarcinomas
inferred← citeshttps://doi.org/10.1007/s11103-026-01741-7openalex-snapshot
FLC genes control flowering time to varying degrees in a Brassica napus spring cultivar
inferred← citeshttps://doi.org/10.1007/s12033-024-01062-4openalex-snapshot
Messenger RNA Surveillance: Current Understanding, Regulatory Mechanisms, and Future Implications
inferred← citeshttps://doi.org/10.1007/s12041-019-1055-8openalex-snapshot
Spectrum of X-linked intellectual disabilities and psychiatric symptoms in a family harbouring a Xp22.12 microduplication encompassing the RPS6KA3 gene
inferred← citeshttps://doi.org/10.1007/s12041-019-1057-6openalex-snapshot
Novel mutation in Cul7 gene in a family diagnosed with 3M syndrome
inferred← citeshttps://doi.org/10.1007/s12264-020-00567-7openalex-snapshot
Role of the C9ORF72 Gene in the Pathogenesis of Amyotrophic Lateral Sclerosis and Frontotemporal Dementia
inferred← citeshttps://doi.org/10.1007/s13258-024-01595-7openalex-snapshot
Potential role of ARG1 c.57G > A variant in Argininemia
inferred← citeshttps://doi.org/10.1016/b978-0-12-803395-1.00009-5openalex-snapshot
Crosstalk Between Non-Coding RNAs and the Epigenome in Development
inferred← citeshttps://doi.org/10.1016/b978-0-12-809633-8.20223-9openalex-snapshot
Genome Informatics
inferred← citeshttps://doi.org/10.1016/b978-0-12-814405-3.00028-xopenalex-snapshot
Posttranscriptional and translational control of neurogenesis
inferred← citeshttps://doi.org/10.1016/b978-0-12-814841-9.00061-0openalex-snapshot
Osteogenesis imperfecta
inferred← citeshttps://doi.org/10.1016/bs.mie.2016.02.008openalex-snapshot
Analysis of Nonsense-Mediated mRNA Decay at the Single-Cell Level Using Two Fluorescent Proteins
inferred← citeshttps://doi.org/10.1016/bs.mie.2017.12.006openalex-snapshot
Cellular Assays for Studying the Fe–S Cluster Containing Base Excision Repair Glycosylase MUTYH and Homologs
inferred← citeshttps://doi.org/10.1016/j.ajhg.2017.07.010openalex-snapshot
Homozygous Truncating Variants in TBC1D23 Cause Pontocerebellar Hypoplasia and Alter Cortical Development
inferred← citeshttps://doi.org/10.1016/j.ajhg.2018.03.004openalex-snapshot
Truncating Variants in NAA15 Are Associated with Variable Levels of Intellectual Disability, Autism Spectrum Disorder, and Congenital Anomalies
inferred← citeshttps://doi.org/10.1016/j.ajhg.2018.06.009openalex-snapshot
Identifying Genes Whose Mutant Transcripts Cause Dominant Disease Traits by Potential Gain-of-Function Alleles
inferred← citeshttps://doi.org/10.1016/j.ajhg.2019.09.005openalex-snapshot
De Novo Pathogenic Variants in N-cadherin Cause a Syndromic Neurodevelopmental Disorder with Corpus Callosum, Axon, Cardiac, Ocular, and Genital Defects
inferred← citeshttps://doi.org/10.1016/j.ajhg.2020.07.014openalex-snapshot
Promoter CpG Density Predicts Downstream Gene Loss-of-Function Intolerance
inferred← citeshttps://doi.org/10.1016/j.ajhg.2025.10.002openalex-snapshot
Origins and implications of intron retention quantitative trait loci in human tissues
inferred← citeshttps://doi.org/10.1016/j.ajhg.2026.09.005openalex-snapshot
Monoallelic variants in BRSK1 are associated with a neurodevelopmental disorder with or without epilepsy
inferred← citeshttps://doi.org/10.1016/j.aquatox.2026.107709openalex-snapshot
Zebrafish Abcg2a mutant line as an in vivo model for evaluation of the interaction of Abcg2a with drugs and contaminants
inferred← citeshttps://doi.org/10.1016/j.arr.2020.101172openalex-snapshot
Insights into disease mechanisms and potential therapeutics for C9orf72-related amyotrophic lateral sclerosis/frontotemporal dementia
inferred← citeshttps://doi.org/10.1016/j.bbadis.2024.167444openalex-snapshot
G6PD deficiency mediated impairment of iNOS and lysosomal acidification affecting phagocytotic clearance in microglia in response to SARS-CoV-2
inferred← citeshttps://doi.org/10.1016/j.bbagen.2017.06.011openalex-snapshot
RNA localization: Making its way to the center stage
inferred← citeshttps://doi.org/10.1016/j.bbrc.2021.09.045openalex-snapshot
Difference in an intermolecular disulfide-bond between two highly homologous serum proteins Leg1a and Leg1b implicates their functional differentiation
inferred← citeshttps://doi.org/10.1016/j.bbrc.2023.05.001openalex-snapshot
UPF1 regulates FOXO1 protein expression by promoting PBK transcription in non-small cell lung cancer
inferred← citeshttps://doi.org/10.1016/j.bbrc.2023.149182openalex-snapshot
Hhex and Prox1a synergistically dictate the hepatoblast to hepatocyte differentiation in zebrafish
inferred← citeshttps://doi.org/10.1016/j.biocel.2017.05.013openalex-snapshot
Expression and alternative splicing of the cyclin-dependent kinase inhibitor-3 gene in human cancer
inferred← citeshttps://doi.org/10.1016/j.biocel.2017.07.013openalex-snapshot
The role of alternative splicing coupled to nonsense-mediated mRNA decay in human disease
inferred← citeshttps://doi.org/10.1016/j.biocel.2022.106272openalex-snapshot
Structural characterization and expression analysis of novel MAPK1 transcript variants with the development of a multiplexed targeted nanopore sequencing approach
inferred← citeshttps://doi.org/10.1016/j.biocel.2026.106961openalex-snapshot
Time-resolved proteomics reveals five modules of stress granule disassembly and identifies SYNCRIP as a late-phase clearance factor
inferred← citeshttps://doi.org/10.1016/j.biochi.2024.04.006openalex-snapshot
Advances in nuclear proteostasis of metazoans
inferred← citeshttps://doi.org/10.1016/j.bone.2018.11.006openalex-snapshot
Lamin B receptor-related disorder is associated with a spectrum of skeletal dysplasia phenotypes
inferred← citeshttps://doi.org/10.1016/j.bpj.2020.02.022openalex-snapshot
Exon Definition Facilitates Reliable Control of Alternative Splicing in the RON Proto-Oncogene
inferred← citeshttps://doi.org/10.1016/j.canlet.2022.01.010openalex-snapshot
Disrupting PHF8-TOPBP1 connection elicits a breast tumor-specific vulnerability to chemotherapeutics
inferred← citeshttps://doi.org/10.1016/j.ccell.2018.01.012openalex-snapshot
Genome-wide CRISPR-Cas9 Screen Identifies Leukemia-Specific Dependence on a Pre-mRNA Metabolic Pathway Regulated by DCPS
inferred← citeshttps://doi.org/10.1016/j.ccell.2026.07.017openalex-snapshot
Proteo-genomics-guided interpretation of somatic mutations in cancer genomes
inferred← citeshttps://doi.org/10.1016/j.cell.2016.02.046openalex-snapshot
The Antagonistic Gene Paralogs Upf3a and Upf3b Govern Nonsense-Mediated RNA Decay
inferred← citeshttps://doi.org/10.1016/j.cell.2016.05.053openalex-snapshot
Leveraging Rules of Nonsense-Mediated mRNA Decay for Genome Engineering and Personalized Medicine
inferred← citeshttps://doi.org/10.1016/j.cell.2019.05.001openalex-snapshot
Multi-Color Single-Molecule Imaging Uncovers Extensive Heterogeneity in mRNA Decoding
inferred← citeshttps://doi.org/10.1016/j.celrep.2016.09.092openalex-snapshot
Highly Efficient Genome Editing of Murine and Human Hematopoietic Progenitor Cells by CRISPR/Cas9
inferred← citeshttps://doi.org/10.1016/j.celrep.2016.10.018openalex-snapshot
Role for the IFT-A Complex in Selective Transport to the Primary Cilium
inferred← citeshttps://doi.org/10.1016/j.celrep.2017.10.095openalex-snapshot
Widespread Translational Remodeling during Human Neuronal Differentiation
inferred← citeshttps://doi.org/10.1016/j.celrep.2018.04.039openalex-snapshot
Mechanism of Nonsense-Mediated mRNA Decay Stimulation by Splicing Factor SRSF1
inferred← citeshttps://doi.org/10.1016/j.celrep.2023.112977openalex-snapshot
Multifaceted contributions of Dicer2 to arbovirus transmission by Aedes aegypti
inferred← citeshttps://doi.org/10.1016/j.celrep.2023.113041openalex-snapshot
PUF60 promotes cell cycle and lung cancer progression by regulating alternative splicing of CDC25C
inferred← citeshttps://doi.org/10.1016/j.celrep.2023.113307openalex-snapshot
Pharmacological depletion of RNA splicing factor RBM39 by indisulam synergizes with PARP inhibitors in high-grade serous ovarian carcinoma
inferred← citeshttps://doi.org/10.1016/j.celrep.2024.114074openalex-snapshot
UPF1 regulates mRNA stability by sensing poorly translated coding sequences
inferred← citeshttps://doi.org/10.1016/j.celrep.2026.117027openalex-snapshot
Nonsense-mediated mRNA decay orchestrates neuronal migration and cortical lamination while modulating Reelin and ciliary gene regulatory networks
inferred← citeshttps://doi.org/10.1016/j.conb.2017.05.012openalex-snapshot
Beyond proteome diversity: alternative splicing as a regulator of neuronal transcript dynamics
inferred← citeshttps://doi.org/10.1016/j.coph.2022.102201openalex-snapshot
Precision medicine for rare diseases: The times they are A-Changin'
inferred← citeshttps://doi.org/10.1016/j.csbj.2021.09.020openalex-snapshot
A rapid CRISPR competitive assay for in vitro and in vivo discovery of potential drug targets affecting the hematopoietic system
inferred← citeshttps://doi.org/10.1016/j.csbj.2026.01.002openalex-snapshot
Empirical optimization of dual-sgRNA design for in vivo CRISPR/Cas9-mediated exon deletion in mice
inferred← citeshttps://doi.org/10.1016/j.cub.2018.10.006openalex-snapshot
Distinct Roles of RZZ and Bub1-KNL1 in Mitotic Checkpoint Signaling and Kinetochore Expansion
inferred← citeshttps://doi.org/10.1016/j.cub.2021.04.052openalex-snapshot
RNA degradation is required for the germ-cell to maternal transition in Drosophila
inferred← citeshttps://doi.org/10.1016/j.devcel.2018.01.022openalex-snapshot
Innate Immune Response and Off-Target Mis-splicing Are Common Morpholino-Induced Side Effects in Xenopus
inferred← citeshttps://doi.org/10.1016/j.ebiom.2020.102990openalex-snapshot
Specific TP53 subtype as biomarker for immune checkpoint inhibitors in lung adenocarcinoma
inferred← citeshttps://doi.org/10.1016/j.ejcb.2025.151500openalex-snapshot
Genetic compensation highlights the importance of neural cell adhesion molecule Ncam1 paralogs in balancing signaling pathways during zebrafish lateral line development
inferred← citeshttps://doi.org/10.1016/j.ejmech.2020.112436openalex-snapshot
Pharmacological approaches for targeting cystic fibrosis nonsense mutations
inferred← citeshttps://doi.org/10.1016/j.ejmech.2020.112989openalex-snapshot
How to determine the mechanism of action of CFTR modulator compounds: A gateway to theranostics
inferred← citeshttps://doi.org/10.1016/j.ejmg.2022.104423openalex-snapshot
A de novo truncating variant in CSDE1 in an adult-onset neuropsychiatric phenotype without intellectual disability
inferred← citeshttps://doi.org/10.1016/j.exphem.2023.11.007openalex-snapshot
Understanding genetic heterogeneity in gene-edited hematopoietic stem cell products
inferred← citeshttps://doi.org/10.1016/j.fsi.2019.08.058openalex-snapshot
Effect of CRISPR/Cas9-mediated knockout of either Mx1 or ISG15 gene in EPC cells on resistance against VHSV infection
inferred← citeshttps://doi.org/10.1016/j.gde.2017.10.007openalex-snapshot
Nonsense-mediated mRNA Decay and Cancer
inferred← citeshttps://doi.org/10.1016/j.gendis.2026.102037openalex-snapshot
Post-transcriptional regulation in intervertebral disc degeneration
inferred← citeshttps://doi.org/10.1016/j.gene.2017.10.048openalex-snapshot
The SMN1 common variant c.22 dupA in Chinese patients causes spinal muscular atrophy by nonsense-mediated mRNA decay in humans
inferred← citeshttps://doi.org/10.1016/j.gene.2019.03.031openalex-snapshot
MicroRNA 4651 regulates nonsense-mediated mRNA decay by targeting SMG9 mRNA
inferred← citeshttps://doi.org/10.1016/j.gene.2024.148856openalex-snapshot
Unraveling novel mRNA transcripts of the human DNA N-glycosylase 1 (NTHL1) gene with the implementation of an innovative targeted DNA-seq assay
inferred← citeshttps://doi.org/10.1016/j.gim.2021.09.001openalex-snapshot
Standardized practices for RNA diagnostics using clinically accessible specimens reclassifies 75% of putative splicing variants
inferred← citeshttps://doi.org/10.1016/j.hrthm.2023.05.006openalex-snapshot
Multicenter clinical and functional evidence reclassifies a recurrent noncanonical filamin C splice-altering variant
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2025.140629openalex-snapshot
Single-cell transcriptional footprint for pseudogene SsCLEC9A is associated with antigen processing and presentation in Sus scrofa
inferred← citeshttps://doi.org/10.1016/j.immuni.2026.02.005openalex-snapshot
Nonsense-mediated mRNA decay inhibition reshapes the cancer immunopeptidome
inferred← citeshttps://doi.org/10.1016/j.isci.2019.06.016openalex-snapshot
MOV10L1 Binds RNA G-Quadruplex in a Structure-Specific Manner and Resolves It More Efficiently Than MOV10
inferred← citeshttps://doi.org/10.1016/j.isci.2022.105543openalex-snapshot
Stress-induced transcriptional readthrough into neighboring genes is linked to intron retention
inferred← citeshttps://doi.org/10.1016/j.isci.2023.106229openalex-snapshot
ILF3 prion-like domain regulates gene expression and fear memory under chronic stress
inferred← citeshttps://doi.org/10.1016/j.isci.2025.114597openalex-snapshot
Pharmacological perturbation of splicing elicits SMG1 reduction: Implications for cancer therapy
inferred← citeshttps://doi.org/10.1016/j.jaci.2023.04.014openalex-snapshot
Comparison of disease phenotypes and mechanistic insight on causal variants in patients with DADA2
inferred← citeshttps://doi.org/10.1016/j.jare.2023.11.017openalex-snapshot
Differences in alternative splicing and their potential underlying factors between animals and plants
inferred← citeshttps://doi.org/10.1016/j.jbc.2022.102592openalex-snapshot
Features and factors that dictate if terminating ribosomes cause or counteract nonsense-mediated mRNA decay
inferred← citeshttps://doi.org/10.1016/j.jbc.2024.107377openalex-snapshot
CK2–HTATSF1–TOPBP1 signaling axis modulates tumor chemotherapy response
inferred← citeshttps://doi.org/10.1016/j.jgg.2019.07.001openalex-snapshot
Gene redundancy and gene compensation: An updated view
inferred← citeshttps://doi.org/10.1016/j.jgg.2022.11.006openalex-snapshot
Cdx1b protects intestinal cell fate by repressing signaling networks for liver specification
inferred← citeshttps://doi.org/10.1016/j.jmb.2018.05.009openalex-snapshot
Nuclear mRNA Surveillance Mechanisms: Function and Links to Human Disease
inferred← citeshttps://doi.org/10.1016/j.jmb.2019.07.005openalex-snapshot
A Nuclear Zip Code in SKS1 mRNA Promotes Its Slow Export, Nuclear Retention, and Degradation by the Nuclear Exosome/DRN in Saccharomyces cerevisiae
inferred← citeshttps://doi.org/10.1016/j.jmb.2023.167956openalex-snapshot
CASC3 Biomolecular Condensates Restrict Turnip Crinkle Virus by Limiting Host Factor Availability
inferred← citeshttps://doi.org/10.1016/j.jmb.2026.169752openalex-snapshot
Standing on the Shoulders of Giant Ribosomes: UPF1-dependent Surveillance of Translation Dynamics to Proteostasis
inferred← citeshttps://doi.org/10.1016/j.jmb.2026.169764openalex-snapshot
Regulation of Eukaryotic Gene Expression Through Functional Coupling Between Alternative Splicing and Nonsense-mediated Decay
inferred← citeshttps://doi.org/10.1016/j.jmb.2026.169918openalex-snapshot
UPF3A and UPF3B Shape the Transcriptome Cooperatively Yet Oppose Cell Function
inferred← citeshttps://doi.org/10.1016/j.jss.2023.09.046openalex-snapshot
Roles for Bile Acid Signaling and Nonsense-Mediated Ribonucleic Acid Decay in Small Bowel Resection-Associated Liver Injury
inferred← citeshttps://doi.org/10.1016/j.legalmed.2021.101967openalex-snapshot
Sudden death due to a novel nonsense mutation in Marfan syndrome
inferred← citeshttps://doi.org/10.1016/j.lfs.2023.122378openalex-snapshot
Improved classification and pathogenicity assessment by comprehensive functional studies in a large data set of KCNQ2 variants
inferred← citeshttps://doi.org/10.1016/j.lfs.2025.124021openalex-snapshot
Protein kinase D is essential for embryonic survival through functionally redundant subtypes
inferred← citeshttps://doi.org/10.1016/j.mam.2025.101443openalex-snapshot
The potential use of anti-codon engineered tRNAs (ACE-tRNAs) to treat nonsense variants causing inherited retinal diseases
inferred← citeshttps://doi.org/10.1016/j.margen.2019.05.007openalex-snapshot
Transcriptional profiles of early stage red sea urchins (Mesocentrotus franciscanus) reveal differential regulation of gene expression across development
inferred← citeshttps://doi.org/10.1016/j.mce.2024.112237openalex-snapshot
Heterozygous ZNHIT3 variants within the 17q12 recurrent deletion region are associated with Mayer-Rokitansky-Kuster Hauser (MRKH) syndrome
inferred← citeshttps://doi.org/10.1016/j.mib.2022.102209openalex-snapshot
Emergence and adaptation of the cellular machinery directing antigenic variation in the African trypanosome
inferred← citeshttps://doi.org/10.1016/j.mocell.2024.100130openalex-snapshot
Transcriptome-wide analysis for glucocorticoid receptor-mediated mRNA decay reveals various classes of target transcripts
inferred← citeshttps://doi.org/10.1016/j.modpat.2026.100994openalex-snapshot
CDKN2A Deletions But Not Point Mutations May Explain Discordant Phenotype of Human Papilloma Virus (HPV) DNA–positive and p16-Negative HPV-Associated Squamous Cell Carcinoma
inferred← citeshttps://doi.org/10.1016/j.modpat.2026.101089openalex-snapshot
Immunoglobulin Light Chain mRNA In Situ Hybridization Refines Classification Across the NLPHL–cHL Spectrum
inferred← citeshttps://doi.org/10.1016/j.molcel.2016.11.032openalex-snapshot
Fluorescence Amplification Method for Forward Genetic Discovery of Factors in Human mRNA Degradation
inferred← citeshttps://doi.org/10.1016/j.molcel.2017.05.034openalex-snapshot
The RNA Surveillance Factor UPF1 Represses Myogenesis via Its E3 Ubiquitin Ligase Activity
inferred← citeshttps://doi.org/10.1016/j.molcel.2017.08.008openalex-snapshot
CRISPR-Mediated Base Editing Enables Efficient Disruption of Eukaryotic Genes through Induction of STOP Codons
inferred← citeshttps://doi.org/10.1016/j.molcel.2019.05.008openalex-snapshot
Single-Molecule Imaging Uncovers Rules Governing Nonsense-Mediated mRNA Decay
inferred← citeshttps://doi.org/10.1016/j.molcel.2024.07.019openalex-snapshot
Molecular impact of mutations in RNA splicing factors in cancer
inferred← citeshttps://doi.org/10.1016/j.molcel.2025.04.022openalex-snapshot
Ribosomes modulate transcriptome abundance via generalized frameshift and out-of-frame mRNA decay
inferred← citeshttps://doi.org/10.1016/j.molmed.2026.09.001openalex-snapshot
The splicing axis of aging: mechanisms and therapeutic opportunities
inferred← citeshttps://doi.org/10.1016/j.molmet.2020.01.010openalex-snapshot
Antisense oligonucleotide treatment produces a type I interferon response that protects against diet-induced obesity
inferred← citeshttps://doi.org/10.1016/j.molmet.2021.101218openalex-snapshot
CRISPR knockdown of Kcnq3 attenuates the M-current and increases excitability of NPY/AgRP neurons to alter energy balance
inferred← citeshttps://doi.org/10.1016/j.nbd.2024.106474openalex-snapshot
Engrailed 1 deficiency induces changes in ciliogenesis during human neuronal differentiation
inferred← citeshttps://doi.org/10.1016/j.neuron.2020.06.036openalex-snapshot
Developmental Attenuation of Neuronal Apoptosis by Neural-Specific Splicing of Bak1 Microexon
inferred← citeshttps://doi.org/10.1016/j.neuron.2024.04.006openalex-snapshot
Epistatic interactions between NMD and TRP53 control progenitor cell maintenance and brain size
inferred← citeshttps://doi.org/10.1016/j.neuroscience.2022.04.017openalex-snapshot
Tau-Induced Elevation of the Activity-Regulated Cytoskeleton Associated Protein Arc1 Causally Mediates Neurodegeneration in the Adult Drosophila Brain
inferred← citeshttps://doi.org/10.1016/j.niox.2019.04.008openalex-snapshot
Regulation of human inducible nitric oxide synthase expression by an upstream open reading frame
inferred← citeshttps://doi.org/10.1016/j.omtm.2021.03.008openalex-snapshot
Generation of macrophages with altered viral sensitivity from genome-edited rhesus macaque iPSCs to model human disease
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