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Crystal structure of a camel single-domain VH antibody fragment in complex with lysozyme

https://doi.org/10.1038/nsb0996-803
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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The outline structure of the T‐cell alpha beta receptor.
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Immunoglobulin VH clan and family identity predicts variable domain structure and may influence antigen binding.
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Length distribution of CDRH3 in antibodies
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Design of interchain disulfide bonds in the framework region of the Fv fragment of the monoclonal antibody B3
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Structural Patterns at Residue Positions 9, 18, 67 and 82 in the VH Framework Regions of Human and Murine Immunoglobulins
inferredcites →https://doi.org/10.1006/jmbi.1996.0373openalex-snapshot
Rearrangement of the Former VL Interface in the Solution Structure of a Camelised, Single Antibody VH Domain
inferredcites →https://doi.org/10.1016/0003-2697(84)90805-4openalex-snapshot
Sequences of proteins of immunological interest
inferredcites →https://doi.org/10.1016/0014-5793(94)80432-xopenalex-snapshot
‘Camelising’ human antibody fragments: NMR studies on VH domains
inferredcites →https://doi.org/10.1016/0022-1759(85)90044-4openalex-snapshot
Measurements of the true affinity constant in solution of antigen-antibody complexes by enzyme-linked immunosorbent assay
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The interpretation of protein structures: Estimation of static accessibility
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Domain association in immunoglobulin molecules
inferredcites →https://doi.org/10.1016/0022-2836(92)90223-7openalex-snapshot
The repertoire of human germline vH sequences reveals about fifty groups of VH segments with different hypervariable loops
inferredcites →https://doi.org/10.1016/0022-2836(92)90224-8openalex-snapshot
Structural repertoire of the human VH segments
inferredcites →https://doi.org/10.1016/0022-2836(92)90500-jopenalex-snapshot
Three-dimensional structure of an Fv from a human IgM immunoglobulin
inferredcites →https://doi.org/10.1016/0022-2836(94)90046-9openalex-snapshot
Three-dimensional structures of the free and the antigen-complexed Fab from monoclonal anti-lysozyme antibody D44.1
inferredcites →https://doi.org/10.1016/0161-5890(91)90040-qopenalex-snapshot
The minimal antigen-binding fragment of antibodies—Fv fragment
inferredcites →https://doi.org/10.1016/0161-5890(91)90062-oopenalex-snapshot
Protein antigenicity: A thermodynamic approach
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Anatomy of the antibody molecule
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Bacterial expression of immunoglobulin fragments
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Antibody engineering
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Major antigen-induced domain rearrangements in an antibody
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Framework residue 71 is a major determinant of the position and conformation of the second hypervariable region in the VH domains of immunoglobulins
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Antibody-antigen interactions
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Conformations of immunoglobulin hypervariable regions
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Man-made antibodies
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Free R value: a novel statistical quantity for assessing the accuracy of crystal structures
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Naturally occurring antibodies devoid of light chains
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Molecular basis of antigen mimicry by an anti-idiotope
inferredcites →https://doi.org/10.1038/nbt0595-475openalex-snapshot
Antibody VH Domains as Small Recognition Units
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“Baculophage:” A new tool for protein display
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Turning lysozyme upside down
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Structural conservation of hypervariable regions in immunoglobulins evolution
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Three-dimensional structure of an antibody-antigen complex.
inferredcites →https://doi.org/10.1073/pnas.86.15.5938openalex-snapshot
Structure of an antibody-antigen complex: crystal structure of the HyHEL-10 Fab-lysozyme complex.
inferredcites →https://doi.org/10.1073/pnas.90.16.7711openalex-snapshot
Three-dimensional structure of a heteroclitic antigen-antibody cross-reaction complex.
inferredcites →https://doi.org/10.1073/pnas.91.3.1089openalex-snapshot
Bound water molecules and conformational stabilization help mediate an antigen-antibody association.
inferredcites →https://doi.org/10.1073/pnas.93.1.7openalex-snapshot
Interactions of protein antigens with antibodies.
inferredcites →https://doi.org/10.1074/jbc.270.30.18067openalex-snapshot
Crystal Structure of a Cross-reaction Complex between Fab F9.13.7 and Guinea Fowl Lysozyme
inferredcites →https://doi.org/10.1093/nar/19.15.4133openalex-snapshot
Multi-subunit proteins on the surface of filamentous phage: methodologies for displaying antibody (Fab) heavy and light chains
inferredcites →https://doi.org/10.1093/protein/7.9.1129openalex-snapshot
Sequence and structure of V H domain from naturally occurring camel heavy chain immunoglobulins lacking light chains
inferredcites →https://doi.org/10.1096/fasebj.9.1.7821765openalex-snapshot
Structural features of the reactions between antibodies and protein antigens
inferredcites →https://doi.org/10.1107/s002188988708662xopenalex-snapshot
Crystal orientation and X-ray pattern prediction routines for area-detector diffractometer systems in macromolecular crystallography
inferredcites →https://doi.org/10.1107/s0021889891004399openalex-snapshot
MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures
inferredcites →https://doi.org/10.1107/s0021889892009944openalex-snapshot
PROCHECK: a program to check the stereochemical quality of protein structures
inferredcites →https://doi.org/10.1107/s0108767390010224openalex-snapshot
Improved methods for building protein models in electron density maps and the location of errors in these models
inferredcites →https://doi.org/10.1107/s0907444993013290openalex-snapshot
X-ray structure of a monoclinic form of hen egg-white lysozyme crystallized at 313 K. Comparison of two independent molecules
inferredcites →https://doi.org/10.1107/s0907444994006396openalex-snapshot
Raster3D Version 2.0. A program for photorealistic molecular graphics
inferredcites →https://doi.org/10.1107/s0907444995014855openalex-snapshot
Refined Structure of the Monoclonal Antibody HyHEL-5 with its Antigen Hen Egg-White Lysozyme
inferredcites →https://doi.org/10.1126/science.2426778openalex-snapshot
Three-Dimensional Structure of an Antigen-Antibody Complex at 2.8 Å Resolution
inferredcites →https://doi.org/10.1126/science.3140379openalex-snapshot
Single-Chain Antigen-Binding Proteins
inferredcites →https://doi.org/10.1126/science.3285470openalex-snapshot
Assembly of a Functional Immunoglobulin F v Fragment in Escherichia coli
inferredcites →https://doi.org/10.1126/science.7511253openalex-snapshot
Crystal Structure of the Principal Neutralization Site of HIV-1
inferredcites →https://doi.org/10.1146/annurev.bi.59.070190.002255openalex-snapshot
ANTIBODY-ANTIGEN COMPLEXES
inferredcites →https://doi.org/10.1146/annurev.biochem.59.1.439openalex-snapshot
Antibody-Antigen Complexes
inferredcites →https://doi.org/10.1146/annurev.immunol.12.1.433openalex-snapshot
Making Antibodies by Phage Display Technology
inferredcites →https://doi.org/10.1146/annurev.iy.12.040194.002245openalex-snapshot
Making Antibodies by Phage Display Technology

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Animal and Human Immunoglobulins
inferred← citeshttps://doi.org/10.1016/b978-012517970-6/50004-7openalex-snapshot
Antigen-Combining Site
inferred← citeshttps://doi.org/10.1016/b978-012546401-7/50014-7openalex-snapshot
IMMUNOLOGY OF CAMELS AND LLAMAS
inferred← citeshttps://doi.org/10.1016/b978-044453125-4.50014-0openalex-snapshot
SINGLE-DOMAIN ANTIBODIES: RUGGED RECOGNITION ELEMENTS FOR TOMORROW'S BIOSENSORS
inferred← citeshttps://doi.org/10.1016/b978-1-907568-37-4.50029-4openalex-snapshot
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The Global Sequence Signature algorithm unveils a structural network surrounding heavy chain CDR3 loop in Camelidae variable domains
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Disposable amperometric magnetoimmunosensors using nanobodies as biorecognition element. Determination of fibrinogen in plasma
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Harnessing sortase A transpeptidation for advanced targeted therapeutics and vaccine engineering
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Structural Repertoire of HIV-1-Neutralizing Antibodies Targeting the CD4 Supersite in 14 Donors
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Adaptive multi-epitope targeting and avidity-enhanced nanobody platform for ultrapotent, durable antiviral therapy
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Integrative proteomics identifies thousands of distinct, multi-epitope, and high-affinity nanobodies
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Specificity and Affinity of Natural Product Cyclopentapeptide Inhibitors against A. fumigatus, Human, and Bacterial Chitinases
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Use of camel single-domain antibodies for the diagnosis and treatment of zoonotic diseases
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Distinct antibody species: structural differences creating therapeutic opportunities
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The urodele amphibian Pleurodeles waltl has a diverse repertoire of immunoglobulin heavy chains with polyreactive and species-specific features
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Nanobodies as molecular imaging probes
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Diagnostic and therapeutic potential of shark variable new antigen receptor (VNAR) single domain antibody
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Infectious disease antibodies for biomedical applications: A mini review of immune antibody phage library repertoire
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A review of plant-based expression systems as a platform for single-domain recombinant antibody production
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Selection of similar single domain antibodies from two immune VHH libraries obtained from two alpacas by using different selection methods
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Immunodominant-Peptide Recognition: Beta Testing TCRαβ
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Conformationally engineering flexible peptides on silver nanoparticles
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50 Years of structural immunology
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HSP-1-specific nanobodies alter chaperone function in vitro and in vivo
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Shark Attack: High affinity binding proteins derived from shark vNAR domains by stepwise in vitro affinity maturation
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Characterization of folding-sensitive nanobodies as tools to study the expression and quality of protein particle immunogens
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Bispecific nanobodies – promising engineered candidates with high therapeutic efficiency
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Targeting tumors with nanobodies for cancer imaging and therapy
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Affinity maturation of a VHH by mutational hotspot randomization
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Crystal Structure of HEL4, a Soluble, Refoldable Human VH Single Domain with a Germ-line Scaffold
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Antigen Binding and Solubility Effects upon the Veneering of a Camel VHH in Framework-2 to Mimic a VH
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Identification of a Universal VHH Framework to Graft Non-canonical Antigen-binding Loops of Camel Single-domain Antibodies
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Maturation of Shark Single-domain (IgNAR) Antibodies: Evidence for Induced-fit Binding
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Evolution of an Interloop Disulfide Bond in High-Affinity Antibody Mimics Based on Fibronectin Type III Domain and Selected by Yeast Surface Display: Molecular Convergence with Single-Domain Camelid and Shark Antibodies
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Teaching an Old Scaffold New Tricks: Monobodies Constructed Using Alternative Surfaces of the FN3 Scaffold
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Design of Synthetic Autonomous VH Domain Libraries and Structural Analysis of a VH Domain Bound to Vascular Endothelial Growth Factor
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Structural Basis of Epitope Recognition by Heavy-Chain Camelid Antibodies
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Intracellular Neutralization of Ricin Toxin by Single-domain Antibodies Targeting the Active Site
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Using nanobodies for breast cancer treatment
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Research strategies to improve snakebite treatment: Challenges and progress
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Nanobody-aided structure determination of the EpsI:EpsJ pseudopilin heterodimer from Vibrio vulnificus
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A novel designed single domain antibody on 3-D structure of ricin A chain remarkably blocked ricin-induced cytotoxicity
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Single-domain antibodies recognize selectively small oligomeric forms of amyloid β, prevent Aβ-induced neurotoxicity and inhibit fibril formation
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Alternative molecular formats and therapeutic applications for bispecific antibodies
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Alternative adaptive immunity strategies: coelacanth, cod and shark immunity
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A nanobody that recognizes a 14-residue peptide epitope in the E2 ubiquitin-conjugating enzyme UBC6e modulates its activity
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Anti-SARS-CoV-1 and −2 nanobody engineering towards avidity-inspired therapeutics
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Diverse human VH antibody fragments with bio-therapeutic properties from the Crescendo Mouse
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Nanobody-Enhanced Targeting of AAV Gene Therapy Vectors
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Flexibility and small pockets at protein–protein interfaces: New insights into druggability
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Antibody-mediated purification of co-expressed antigen–antibody complexes
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High yield purification of nanobodies from the periplasm of E. coli as fusions with the maltose binding protein
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Engineering and characterization of GFP-targeting nanobody: Expression, purification, and post-translational modification analysis
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A kaleidoscope of hosts: Expression systems of recombinant antibody reagents for immunological assays
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Nanobodies® † †Nanobody is a registered trademark of Ablynx NV. as inhaled biotherapeutics for lung diseases
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A stable cytosolic expression of VH antibody fragment directed against PVY NIa protein in transgenic potato plant confers partial protection against the virus
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Camelid nanobodies: killing two birds with one stone
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Deep sequencing in library selection projects: what insight does it bring?
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Camelid and shark single domain antibodies: structural features and therapeutic potential
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Nanobodies to study protein conformational states
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Immunochemical analysis of IgG subclasses and IgM in South American camelids
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Structure of an IgNAR-AMA1 Complex: Targeting a Conserved Hydrophobic Cleft Broadens Malarial Strain Recognition
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Molecular Interactions between a Recombinant IgE Antibody and the β-Lactoglobulin Allergen
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Chaperone-Assisted Crystallography with DARPins
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Structures of Adnectin/Protein Complexes Reveal an Expanded Binding Footprint
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Structural Evaluation of EGFR Inhibition Mechanisms for Nanobodies/VHH Domains
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HDX-MS-optimized approach to characterize nanobodies as tools for biochemical and structural studies of class IB phosphoinositide 3-kinases
inferred← citeshttps://doi.org/10.1016/j.str.2021.11.006openalex-snapshot
Llamanade: An open-source computational pipeline for robust nanobody humanization
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Nanobodies restore stability to cancer-associated mutants of tumor suppressor protein p16INK4a
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Modulating ion channels with nanobodies
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Domain antibodies: proteins for therapy
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Toward aggregation-resistant antibodies by design
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Design principles for engineering light-controlled antibodies
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Isolation, characterization and pentamerization of α-cobrotoxin specific single-domain antibodies from a naïve phage display library: Preliminary findings for antivenom development
inferred← citeshttps://doi.org/10.1016/j.toxicon.2026.109092openalex-snapshot
Humanized synthetic nanobody library for antivenom development
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Minimalist nanobody architecture: A double-edged sword for immunological analysis
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Development of GEM-PA-nanotrap for purification of foot-and-mouth disease virus
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Development of ELISAs for the measurement of IgM and IgG subclasses in sera from llamas (Lama glama) and assessment of the humoral immune response against different antigens
inferred← citeshttps://doi.org/10.1016/j.vetimm.2008.10.299openalex-snapshot
Camelid immunoglobulins and nanobody technology
inferred← citeshttps://doi.org/10.1016/j.vetimm.2014.03.004openalex-snapshot
Selection and identification of single-domain antibody fragment against capsid protein of porcine circovirus type 2 (PCV2) from C. bactrianus
inferred← citeshttps://doi.org/10.1016/j.vetmic.2006.10.029openalex-snapshot
Passive immunization of guinea pigs with llama single-domain antibody fragments against foot-and-mouth disease
inferred← citeshttps://doi.org/10.1016/j.virs.2022.02.010openalex-snapshot
Characterization of human IgM and IgG repertoires in individuals with chronic HIV-1 infection
inferred← citeshttps://doi.org/10.1016/j.yjsbx.2026.100166openalex-snapshot
Convergent strategies for nanobody-mediated inhibition of an epoxide hydrolase
inferred← citeshttps://doi.org/10.1016/s0006-3495(03)75032-2openalex-snapshot
Structural Modeling Extends QSAR Analysis of Antibody-Lysozyme Interactions to 3D-QSAR
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