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Genetic data from algae sedimentary DNA reflect the influence of environment over geography

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Outgoing claims: the papers this work cites, builds on, or argues with.

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Historical genetics on a sediment core from a Kenyan lake: intraspecific genotype turnover in a tropical rotifer is related to past environmental changes
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A combined paleolimnological/genetic analysis of diatoms reveals divergent evolutionary lineages of Staurosira and Staurosirella (Bacillariophyta) in Siberian lake sediments along a latitudinal transect
inferredcites →https://doi.org/10.1016/j.cub.2007.04.033openalex-snapshot
Coupling Genetic and Ecological-Niche Models to Examine How Past Population Distributions Contribute to Divergence
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Combined DNA and lipid analyses of sediments reveal changes in Holocene haptophyte and diatom populations in an Antarctic lake
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Environmental variability in northeastern Siberia during the last ~ 13,300 yr inferred from lake diatoms and sediment–geochemical parameters
inferredcites →https://doi.org/10.1016/j.palaeo.2013.06.033openalex-snapshot
A pollen-climate transfer function from the tundra and taiga vegetation in Arctic Siberia and its applicability to a Holocene record
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An Assessment of Potential Diatom “Barcode” Genes (cox1, rbcL, 18S and ITS rDNA) and their Effectiveness in Determining Relationships in Sellaphora (Bacillariophyta)
inferredcites →https://doi.org/10.1016/j.protis.2007.09.004openalex-snapshot
Global Diversity and Biogeography of Skeletonema Species (Bacillariophyta)
inferredcites →https://doi.org/10.1016/j.protis.2009.02.001openalex-snapshot
Highly Differentiated Populations of the Freshwater Diatom Sellaphora capitata Suggest Limited Dispersal and Opportunities for Allopatric Speciation
inferredcites →https://doi.org/10.1016/j.protis.2012.04.001openalex-snapshot
Molecular Evidence for Distinct Antarctic Lineages in the Cosmopolitan Terrestrial Diatoms Pinnularia borealis and Hantzschia amphioxys
inferredcites →https://doi.org/10.1016/j.protis.2013.07.005openalex-snapshot
First Evidence of the Existence of Semi-Cryptic Species and of a Phylogeographic Structure in the Gomphonema parvulum (Kützing) Kützing Complex (Bacillariophyta)
inferredcites →https://doi.org/10.1016/j.quascirev.2012.03.004openalex-snapshot
Aquatic ecosystem responses to Holocene climate change and biome development in boreal, central Asia
inferredcites →https://doi.org/10.1016/j.quascirev.2012.06.020openalex-snapshot
Present-day variability and Holocene dynamics of permafrost-affected lakes in central Yakutia (Eastern Siberia) inferred from diatom records
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Ecotone: speciation-prone
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Large-scale processes and the Asian bias in species diversity of temperate plants
inferredcites →https://doi.org/10.1038/ncomms3408openalex-snapshot
Siberian larch forests and the ion content of thaw lakes form a geochemically functional entity
inferredcites →https://doi.org/10.1038/nrmicro1341openalex-snapshot
Microbial biogeography: putting microorganisms on the map
inferredcites →https://doi.org/10.1038/nrmicro2795openalex-snapshot
Beyond biogeographic patterns: processes shaping the microbial landscape
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Patterns in the distribution, composition and diversity of diatom assemblages in relation to ecoclimatic factors in Arctic Lapland
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Effect of PCR template concentration on the composition and distribution of total community 16S rDNA clone libraries
inferredcites →https://doi.org/10.1073/pnas.1001380107openalex-snapshot
Limits to gene flow in a cosmopolitan marine planktonic diatom
inferredcites →https://doi.org/10.1073/pnas.1013528108openalex-snapshot
Hundred years of genetic structure in a sediment revived diatom population
inferredcites →https://doi.org/10.1073/pnas.1219283110openalex-snapshot
Evolution of the plankton paleome in the Black Sea from the Deglacial to Anthropocene
inferredcites →https://doi.org/10.1073/pnas.96.6.2864openalex-snapshot
Molecular evidence of cryptic speciation in planktonic foraminifers and their relation to oceanic provinces
inferredcites →https://doi.org/10.1086/675079openalex-snapshot
A next-generation sequencing approach to river biomonitoring using benthic diatoms
inferredcites →https://doi.org/10.1093/nar/gkl938openalex-snapshot
Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding
inferredcites →https://doi.org/10.1098/rstb.2007.2200openalex-snapshot
Climate change and the northern Russian treeline zone
inferredcites →https://doi.org/10.1111/1755-0998.12105openalex-snapshot
Next‐generation sequencing to inventory taxonomic diversity in eukaryotic communities: a test for freshwater diatoms
inferredcites →https://doi.org/10.1111/gcb.12406openalex-snapshot
Tall shrub and tree expansion in Siberian tundra ecotones since the 1960s
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Differentiation of tundra/taiga and boreal coniferous forest wolves: genetics, coat colour and association with migratory caribou
inferredcites →https://doi.org/10.1111/j.1365-294x.2010.04684.xopenalex-snapshot
Genomic signals of diversification along ecological gradients in a tropical lizard
inferredcites →https://doi.org/10.1111/j.1365-294x.2010.04813.xopenalex-snapshot
Complex phylogeographic patterns in the freshwater alga Synura provide new insights into ubiquity vs. endemism in microbial eukaryotes
inferredcites →https://doi.org/10.1111/j.1365-294x.2011.05278.xopenalex-snapshot
Islands in the ice: detecting past vegetation on Greenlandic nunataks using historical records and sedimentary ancient DNA Meta‐barcoding
inferredcites →https://doi.org/10.1111/j.1365-294x.2011.05412.xopenalex-snapshot
Hidden diversity in diatoms of Kenyan Lake Naivasha: a genetic approach detects temporal variation
inferredcites →https://doi.org/10.1111/j.1365-294x.2012.05542.xopenalex-snapshot
Environmental DNA
inferredcites →https://doi.org/10.1111/j.1365-294x.2012.05659.xopenalex-snapshot
Different biogeographic patterns of prokaryotes and microbial eukaryotes in epilithic biofilms
inferredcites →https://doi.org/10.1111/j.1466-8238.2011.00742.xopenalex-snapshot
Phylogenetic turnover in tropical tree communities: impact of environmental filtering, biogeography and mesoclimatic niche conservatism
inferredcites →https://doi.org/10.1111/j.1529-8817.2007.00454.xopenalex-snapshot
A MOLECULAR SYSTEMATIC APPROACH TO EXPLORE DIVERSITY WITHIN THE SELLAPHORA PUPULA SPECIES COMPLEX (BACILLARIOPHYTA)1
inferredcites →https://doi.org/10.1126/science.1236404openalex-snapshot
Temperature Drives the Continental-Scale Distribution of Key Microbes in Topsoil Communities
inferredcites →https://doi.org/10.1139/z91-013openalex-snapshot
Preservation of avian blood and tissue samples for DNA analyses
inferredcites →https://doi.org/10.1186/1471-2164-11-434openalex-snapshot
An In silico approach for the evaluation of DNA barcodes
inferredcites →https://doi.org/10.1186/jbiol60openalex-snapshot
Cryptic biodiversity in a changing world
inferredcites →https://doi.org/10.1191/095968399675614733openalex-snapshot
Past environmental and climatic changes related to tree-line shifts inferred from fossil diatoms from a lake near the Lena River Delta, Siberia
inferredcites →https://doi.org/10.1214/ba/1339616472openalex-snapshot
Flexible paleoclimate age-depth models using an autoregressive gamma process
inferredcites →https://doi.org/10.1371/journal.pone.0021264openalex-snapshot
Phylogenetic Beta Diversity Metrics, Trait Evolution and Inferring the Functional Beta Diversity of Communities
inferredcites →https://doi.org/10.1371/journal.pone.0086885openalex-snapshot
Does the Cosmopolitan Diatom Gomphonema parvulum (Kützing) Kützing Have a Biogeography?
inferredcites →https://doi.org/10.1890/06-1564.1openalex-snapshot
HISTORICAL PROCESSES CONSTRAIN PATTERNS IN GLOBAL DIATOM DIVERSITY
inferredcites →https://doi.org/10.2458/azu_js_rc.55.16947openalex-snapshot
IntCal13 and Marine13 Radiocarbon Age Calibration Curves 0–50,000 Years cal BP
inferredcites →https://doi.org/10.3732/ajb.1300306openalex-snapshot
Cryptic diversity in a cosmopolitan diatom known as Asterionellopsis glacialis (Fragilariaceae): Implications for ecology, biogeography, and taxonomy
inferredcites →https://doi.org/10.5194/cp-10-1017-2014openalex-snapshot
Late Pliocene and Early Pleistocene vegetation history of northeastern Russian Arctic inferred from the Lake El'gygytgyn pollen record
inferredcites →https://doi.org/10.5507/fot.2013.012openalex-snapshot
Molecular species discovery in the diatom Sellaphora and its congruence with mating trials.

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.3897/mbmg.10.183921zenodo-depositor-declared
Evaluation of two overlapping rbcL amplicons for routine diatom DNA biomonitoring
inferred← citeshttps://doi.org/10.1002/ece3.7183openalex-snapshot
Holocene chloroplast genetic variation of shrubs (Alnus alnobetula, Betula nana, Salix sp.) at the siberian tundra‐taiga ecotone inferred from modern chloroplast genome assembly and sedimentary ancient DNA analyses
inferred← citeshttps://doi.org/10.1002/edn3.547openalex-snapshot
Recovering short DNA fragments from minerals and marine sediments: A comparative study evaluating lysis and isolation approaches
inferred← citeshttps://doi.org/10.1007/13836_2018_38openalex-snapshot
Reconstructing Past Vegetation Communities Using Ancient DNA from Lake Sediments
inferred← citeshttps://doi.org/10.1007/978-3-030-92499-7_4openalex-snapshot
Ancient Diatom DNA
inferred← citeshttps://doi.org/10.1007/978-3-031-43799-1_4openalex-snapshot
Bacterial and Archaeal DNA from Lake Sediments
inferred← citeshttps://doi.org/10.1007/978-3-031-43799-1_6openalex-snapshot
Protist DNA from Lake Sediments
inferred← citeshttps://doi.org/10.1007/978-3-031-43799-1_7openalex-snapshot
Diatom DNA from Lake Sediments
inferred← citeshttps://doi.org/10.1007/978-981-19-5920-2_4openalex-snapshot
Alpine Lake Environments and Psychrophile Diatoms Around the World with a Particular Emphasis on Turkish Glacial Lakes
inferred← citeshttps://doi.org/10.1007/s10933-016-9926-yopenalex-snapshot
Sedimentary DNA versus morphology in the analysis of diatom-environment relationships
inferred← citeshttps://doi.org/10.1007/s10933-017-0005-9openalex-snapshot
To what extent is the DNA of microbial eukaryotes modified during burying into lake sediments? A repeat-coring approach on annually laminated sediments
inferred← citeshttps://doi.org/10.1007/s10933-017-9958-yopenalex-snapshot
DNA-based methods in paleolimnology: new opportunities for investigating long-term dynamics of lacustrine biodiversity
inferred← citeshttps://doi.org/10.1007/s10933-020-00133-1openalex-snapshot
Genetic and morphologic determination of diatom community composition in surface sediments from glacial and thermokarst lakes in the Siberian Arctic
inferred← citeshttps://doi.org/10.1016/bs.abr.2017.06.002openalex-snapshot
Let There Be Light: A Contemporary Primer on Primary Plastid Endosymbiosis
inferred← citeshttps://doi.org/10.1016/j.ecolind.2023.111356openalex-snapshot
Conventional net tow versus environmental DNA for metabarcoding-based analysis of plankton-environment interactions in polluted aquatic ecosystems
inferred← citeshttps://doi.org/10.1016/j.gca.2024.12.002openalex-snapshot
Taxon-specific hydrogen isotope signals in cultures and mesocosms facilitate ecosystem and hydroclimate reconstruction
inferred← citeshttps://doi.org/10.1016/j.quascirev.2022.107758openalex-snapshot
Long-term fungus–plant covariation from multi-site sedimentary ancient DNA metabarcoding
inferred← citeshttps://doi.org/10.1016/j.tree.2018.09.003openalex-snapshot
Environmental DNA Time Series in Ecology
inferred← citeshttps://doi.org/10.1029/2022jg006825openalex-snapshot
Reconstruction of the Eukaryotic Communities in Beppu Bay Over the Past 50 Years Based on Sedimentary DNA Barcoding
inferred← citeshttps://doi.org/10.1038/s41598-018-35550-wopenalex-snapshot
Temporal and spatial patterns of mitochondrial haplotype and species distributions in Siberian larches inferred from ancient environmental DNA and modeling
inferred← citeshttps://doi.org/10.1080/23818107.2020.1765865openalex-snapshot
Two new Punctastriata (Bacillariophyta) species from subalpine French lakes
inferred← citeshttps://doi.org/10.1101/2021.11.05.465756openalex-snapshot
Long-term fungus-plant co-variation from multi-site sedimentary ancient DNA metabarcoding in Siberia
inferred← citeshttps://doi.org/10.1111/fwb.14027openalex-snapshot
Investigating the effects of anthropogenic stressors on lake biota using sedimentary DNA
inferred← citeshttps://doi.org/10.1111/jbi.13786openalex-snapshot
Phylogenetic diversity and environment form assembly rules for Arctic diatom genera—A study on recent and ancient sedimentary DNA
inferred← citeshttps://doi.org/10.1111/mec.13893openalex-snapshot
Long‐term dynamics in microbial eukaryotes communities: a palaeolimnological view based on sedimentary DNA
inferred← citeshttps://doi.org/10.1111/nph.14470openalex-snapshot
Ancient plant DNA in lake sediments
inferred← citeshttps://doi.org/10.1128/aem.02174-16openalex-snapshot
Sedimentary DNA Reveals Cyanobacterial Community Diversity over 200 Years in Two Perialpine Lakes
inferred← citeshttps://doi.org/10.1144/sp511-2020-47openalex-snapshot
Palaeomycology: a modern mycological view of fungal palynomorphs
inferred← citeshttps://doi.org/10.1371/journal.pone.0230284openalex-snapshot
Lake-depth related pattern of genetic and morphological diatom diversity in boreal Lake Bolshoe Toko, Eastern Siberia
inferred← citeshttps://doi.org/10.31223/x56x1zopenalex-snapshot
Chapter 4. Bacterial and archaeal DNA from lake sediments
inferred← citeshttps://doi.org/10.3389/feart.2024.1354284openalex-snapshot
Late Glacial and Holocene vegetation and lake changes in SW Yakutia, Siberia, inferred from sedaDNA, pollen, and XRF data
inferred← citeshttps://doi.org/10.3390/quat4010006openalex-snapshot
Lake Sedimentary DNA Research on Past Terrestrial and Aquatic Biodiversity: Overview and Recommendations
inferred← citeshttps://doi.org/10.5194/os-16-1017-2020openalex-snapshot
Changes in the composition of marine and sea-ice diatoms derived from sedimentary ancient DNA of the eastern Fram Strait over the past 30 000 years
inferred← citeshttps://doi.org/10.7554/elife.75163openalex-snapshot
Regional opportunities for tundra conservation in the next 1000 years
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