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De novo transcriptome sequencing and gene expression profiling of spinach (Spinacia oleracea L.) leaves under heat stress

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Heat stress response in plants: a complex game with chaperones and more than twenty heat stress transcription factors
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Functional analysis of an Arabidopsis transcription factor WRKY25 in heat stress
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Programmed-cell-death hallmarks in incompatible pollen and papillar stigma cells of Olea europaea L. under free pollination
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Stress and developmental responses of terpenoid biosynthetic genes in Cistus creticus subsp. creticus
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Comprehensive analysis of rice DREB2-type genes that encode transcription factors involved in the expression of abiotic stress-responsive genes
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Heat shock factors in rice (Oryza sativa L.): genome-wide expression analysis during reproductive development and abiotic stress
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Functional Characterization of Arabidopsis thaliana WRKY39 in Heat Stress
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Expression of dehydrins under heat stress and their relationship with water relations of sugarcane leaves
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Identification of a C2H2-type zinc finger gene family from Eucalyptus grandis and its response to various abiotic stresses
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Heat stress-induced H2O2 is required for effective expression of heat shock genes in Arabidopsis
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Transcript profiling during salt stress of young cotton (Gossypium hirsutum) seedlings via Solexa sequencing
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MYB transcription factor genes as regulators for plant responses: an overview
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Heat tolerance in plants: An overview
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Over-expression of mitochondrial heat shock protein 70 suppresses programmed cell death in rice
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Genome-wide analysis of the mitogen-activated protein kinase gene family in Solanum lycopersicum
inferredcites →https://doi.org/10.1016/j.gene.2013.08.048openalex-snapshot
Transcriptome profile reveals heat response mechanism at molecular and metabolic levels in rice flag leaf
inferredcites →https://doi.org/10.1016/j.plaphy.2010.08.016openalex-snapshot
Reactive oxygen species and antioxidant machinery in abiotic stress tolerance in crop plants
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Ecotypic variation in chloroplast small heat-shock proteins and related thermotolerance in Chenopodium album
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Role of plant heat-shock proteins and molecular chaperones in the abiotic stress response
inferredcites →https://doi.org/10.1016/j.tplants.2010.06.005openalex-snapshot
MYB transcription factors in Arabidopsis
inferredcites →https://doi.org/10.1016/j.ygeno.2008.07.001openalex-snapshot
Applications of next-generation sequencing technologies in functional genomics
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Identification of differentially expressed genes in cucumber (Cucumis sativus L.) root under waterlogging stress by digital gene expression profile
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Mitochondrial small heat‐shock protein enhances thermotolerance in tobacco plants
inferredcites →https://doi.org/10.1016/s1360-1385(01)02223-3openalex-snapshot
bZIP transcription factors in Arabidopsis
inferredcites →https://doi.org/10.1016/s1360-1385(98)01200-xopenalex-snapshot
Carotenoids as membrane stabilizers in chloroplasts
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Full-length transcriptome assembly from RNA-Seq data without a reference genome
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The developmental dynamics of the maize leaf transcriptome
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Next generation sequencing has lower sequence coverage and poorer SNP-detection capability in the regulatory regions
inferredcites →https://doi.org/10.1038/srep08259openalex-snapshot
De novo assembly, transcriptome characterization, lignin accumulation and anatomic characteristics: novel insights into lignin biosynthesis during celery leaf development
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Landscape of the lipidome and transcriptome under heat stress in Arabidopsis thaliana
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LEA proteins prevent protein aggregation due to water stress
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Dual function of an Arabidopsis transcription factor DREB2A in water-stress-responsive and heat-stress-responsive gene expression
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edgeR : a Bioconductor package for differential expression analysis of digital gene expression data
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Transcriptional profiling of maturing tomato (Solanum lycopersicum L.) microspores reveals the involvement of heat shock proteins, ROS scavengers, hormones, and sugars in the heat stress response
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A new mathematical model for relative quantification in real-time RT-PCR
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Calmodulin Is Involved in Heat Shock Signal Transduction in Wheat
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A Heat-Inducible Transcription Factor, HsfA2, Is Required for Extension of Acquired Thermotolerance in Arabidopsis
inferredcites →https://doi.org/10.1104/pp.108.133744openalex-snapshot
Molecular and Genetic Evidence for the Key Role of AtCaM3 in Heat-Shock Signal Transduction in Arabidopsis
inferredcites →https://doi.org/10.1104/pp.116.1.439openalex-snapshot
The Small, Methionine-Rich Chloroplast Heat-Shock Protein Protects Photosystem II Electron Transport during Heat Stress1
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Isolation and Functional Analysis of Arabidopsis Stress-Inducible NAC Transcription Factors That Bind to a Drought-Responsivecis-Element in theearly responsive to dehydration stress 1Promoter[W]
inferredcites →https://doi.org/10.1111/j.1365-3040.2007.01754.xopenalex-snapshot
A heat‐activated MAP kinase (HAMK) as a mediator of heat shock response in tobacco cells
inferredcites →https://doi.org/10.1111/j.1365-3040.2011.02278.xopenalex-snapshot
The role of class A1 heat shock factors (HSFA1s) in response to heat and other stresses in Arabidopsis
inferredcites →https://doi.org/10.1111/j.1365-3040.2012.02525.xopenalex-snapshot
The wheat chloroplastic small heat shock protein (sHSP26) is involved in seed maturation and germination and imparts tolerance to heat stress
inferredcites →https://doi.org/10.1111/j.1365-313x.2004.02272.xopenalex-snapshot
Identification of novel heat shock factor‐dependent genes and biochemical pathways in Arabidopsis thaliana
inferredcites →https://doi.org/10.1111/j.1365-313x.2006.02873.xopenalex-snapshot
An Arabidopsis chloroplast‐targeted Hsp101 homologue, APG6, has an essential role in chloroplast development as well as heat‐stress response
inferredcites →https://doi.org/10.1111/j.1365-313x.2006.02889.xopenalex-snapshot
Arabidopsis heat shock transcription factor A2 as a key regulator in response to several types of environmental stress
inferredcites →https://doi.org/10.1111/j.1399-3054.2008.01090.xopenalex-snapshot
Reactive oxygen signaling and abiotic stress
inferredcites →https://doi.org/10.1111/j.1744-7909.2008.00735.xopenalex-snapshot
Identification and Characterization of Proteins Associated with Plant Tolerance to Heat Stress
inferredcites →https://doi.org/10.1186/1471-2164-10-347openalex-snapshot
Comparison of next generation sequencing technologies for transcriptome characterization
inferredcites →https://doi.org/10.1186/1471-2164-12-384openalex-snapshot
Temperature stress differentially modulates transcription in meiotic anthers of heat-tolerant and heat-sensitive tomato plants
inferredcites →https://doi.org/10.1186/1471-2164-13-266openalex-snapshot
De novo sequencing and analysis of root transcriptome using 454 pyrosequencing to discover putative genes associated with drought tolerance in Ammopiptanthus mongolicus
inferredcites →https://doi.org/10.1186/1471-2164-9-432openalex-snapshot
Heat stress-responsive transcriptome analysis in heat susceptible and tolerant wheat (Triticum aestivum L.) by using Wheat Genome Array
inferredcites →https://doi.org/10.1186/1471-2229-10-234openalex-snapshot
Whole genome wide expression profiles of Vitis amurensisgrape responding to downy mildew by using Solexa sequencing technology
inferredcites →https://doi.org/10.1186/1471-2229-12-174openalex-snapshot
Transcriptomic analysis of grape (Vitis vinifera L.) leaves during and after recovery from heat stress
inferredcites →https://doi.org/10.1186/gb-2009-10-3-r25openalex-snapshot
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
inferredcites →https://doi.org/10.1371/journal.pone.0047810openalex-snapshot
Identification of Differentially-Expressed Genes Associated with Pistil Abortion in Japanese Apricot by Genome-Wide Transcriptional Analysis
inferredcites →https://doi.org/10.1371/journal.pone.0049652openalex-snapshot
Expression Profile in Rice Panicle: Insights into Heat Response Mechanism at Reproductive Stage
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Structure and functions of plant calcium-dependent protein kinases.
inferredcites →https://doi.org/10.3389/fpls.2013.00273openalex-snapshot
Plant tolerance to high temperature in a changing environment: scientific fundamentals and production of heat stress-tolerant crops
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Designing a transcriptome next‐generation sequencing project for a nonmodel plant species1
inferredcites →https://doi.org/10.5547/issn0195-6574-ej-vol13-no1-4openalex-snapshot
CETA: A Model for Carbon Emissions Trajectory Assessment

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Optimization of Agrobacterium-mediated transient expression of heterologous genes in spinach
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Additional file 1 of Genome-wide identification and expression analysis reveals spinach brassinosteroid-signaling kinase (BSK) gene family functions in temperature stress response
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Additional file 2 of Genome-wide identification and expression analysis reveals spinach brassinosteroid-signaling kinase (BSK) gene family functions in temperature stress response
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Additional file 3 of Genome-wide identification and expression analysis reveals spinach brassinosteroid-signaling kinase (BSK) gene family functions in temperature stress response
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Additional file 4 of Genome-wide identification and expression analysis reveals spinach brassinosteroid-signaling kinase (BSK) gene family functions in temperature stress response
inferred← citeshttps://doi.org/10.6084/m9.figshare.20106597openalex-snapshot
Additional file 5 of Genome-wide identification and expression analysis reveals spinach brassinosteroid-signaling kinase (BSK) gene family functions in temperature stress response
inferred← citeshttps://doi.org/10.6084/m9.figshare.20106600openalex-snapshot
Additional file 6 of Genome-wide identification and expression analysis reveals spinach brassinosteroid-signaling kinase (BSK) gene family functions in temperature stress response
inferred← citeshttps://doi.org/10.6084/m9.figshare.20106603openalex-snapshot
Additional file 7 of Genome-wide identification and expression analysis reveals spinach brassinosteroid-signaling kinase (BSK) gene family functions in temperature stress response
inferred← citeshttps://doi.org/10.6084/m9.figshare.26742389openalex-snapshot
Additional file 1 of A high-efficiency transient expression system mediated by Agrobacterium tumefaciens in Spinacia oleracea leaves
inferred← citeshttps://doi.org/10.6084/m9.figshare.26742392openalex-snapshot
Additional file 2 of A high-efficiency transient expression system mediated by Agrobacterium tumefaciens in Spinacia oleracea leaves
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