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Inhabitancy of active Nitrosopumilus-like ammonia-oxidizing archaea and Nitrospira nitrite-oxidizing bacteria in the sponge Theonella swinhoei

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/bf01925581openalex-snapshot
Two classes of metabolites fromTheonella swinhoei are localized in distinct populations of bacterial symbionts
inferredcites →https://doi.org/10.1007/s00248-010-9662-1openalex-snapshot
Effects of Sponge Bleaching on Ammonia-Oxidizing Archaea: Distribution and Relative Expression of Ammonia Monooxygenase Genes Associated with the Barrel Sponge Xestospongia muta
inferredcites →https://doi.org/10.1007/s00248-015-0632-5openalex-snapshot
Composition and Predictive Functional Analysis of Bacterial Communities in Seawater, Sediment and Sponges in the Spermonde Archipelago, Indonesia
inferredcites →https://doi.org/10.1016/j.margen.2014.08.007openalex-snapshot
Diversity and activity of marine bacterioplankton during a diatom bloom in the North Sea assessed by total RNA and pyrotag sequencing
inferredcites →https://doi.org/10.1016/j.mimet.2010.10.001openalex-snapshot
Novel primers for 16S rRNA-based archaeal community analyses in environmental samples
inferredcites →https://doi.org/10.1038/ismej.2008.72openalex-snapshot
Presence and activity of anaerobic ammonium-oxidizing bacteria at deep-sea hydrothermal vents
inferredcites →https://doi.org/10.1038/ismej.2009.143openalex-snapshot
Activity profiles for marine sponge-associated bacteria obtained by 16S rRNA vs 16S rRNA gene comparisons
inferredcites →https://doi.org/10.1038/ismej.2009.84openalex-snapshot
Diversity of aerobic and anaerobic ammonia-oxidizing bacteria in marine sponges
inferredcites →https://doi.org/10.1038/ismej.2011.178openalex-snapshot
Nitrite oxidation in the Namibian oxygen minimum zone
inferredcites →https://doi.org/10.1038/ismej.2012.165openalex-snapshot
Marine microbial symbiosis heats up: the phylogenetic and functional response of a sponge holobiont to thermal stress
inferredcites →https://doi.org/10.1038/ismej.2013.102openalex-snapshot
Evaluating rRNA as an indicator of microbial activity in environmental communities: limitations and uses
inferredcites →https://doi.org/10.1038/ismej.2013.227openalex-snapshot
Host-specificity among abundant and rare taxa in the sponge microbiome
inferredcites →https://doi.org/10.1038/nature12959openalex-snapshot
An environmental bacterial taxon with a large and distinct metabolic repertoire
inferredcites →https://doi.org/10.1038/nrg3367openalex-snapshot
Sequence assembly demystified
inferredcites →https://doi.org/10.1038/nrmicro2839openalex-snapshot
Genomic insights into the marine sponge microbiome
inferredcites →https://doi.org/10.1038/srep03895openalex-snapshot
Metabolic profiles of prokaryotic and eukaryotic communities in deep-sea sponge Neamphius huxleyi indicated by metagenomics
inferredcites →https://doi.org/10.1038/srep18071openalex-snapshot
Sedimentary archaeal amoA gene abundance reflects historic nutrient level and salinity fluctuations in Qinghai Lake, Tibetan Plateau
inferredcites →https://doi.org/10.1073/pnas.0506625102openalex-snapshot
Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
inferredcites →https://doi.org/10.1073/pnas.0608549103openalex-snapshot
Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum
inferredcites →https://doi.org/10.1093/femsec/fiv043openalex-snapshot
Potential metabolic strategies of widely distributed holobionts in the oceanic archipelago of St Peter and St Paul (Brazil)
inferredcites →https://doi.org/10.1093/molbev/mst012openalex-snapshot
Building Phylogenetic Trees from Molecular Data with MEGA
inferredcites →https://doi.org/10.1093/nar/gkg524openalex-snapshot
CODEHOP (COnsensus-DEgenerate Hybrid Oligonucleotide Primer) PCR primer design
inferredcites →https://doi.org/10.1111/1462-2920.12010openalex-snapshot
Thermal stress responses in the bacterial biosphere of the G reat B arrier R eef sponge, R hopaloeides odorabile
inferredcites →https://doi.org/10.1111/1462-2920.12300openalex-snapshot
NxrB encoding the beta subunit of nitrite oxidoreductase as functional and phylogenetic marker for nitrite‐oxidizing N itrospira
inferredcites →https://doi.org/10.1111/1462-2920.12533openalex-snapshot
Revealing microbial functional activities in the R ed S ea sponge S tylissa carteri by metatranscriptomics
inferredcites →https://doi.org/10.1111/1462-2920.12827openalex-snapshot
Similar sponge‐associated bacteria can be acquired via both vertical and horizontal transmission
inferredcites →https://doi.org/10.1111/1758-2229.12272openalex-snapshot
Shifts in the meso‐ and bathypelagic archaea communities composition during recovery and short‐term handling of decompressed deep‐sea samples
inferredcites →https://doi.org/10.1111/brv.12090openalex-snapshot
Giving the early fossil record of sponges a squeeze
inferredcites →https://doi.org/10.1111/j.1365-294x.2008.03808.xopenalex-snapshot
Cryptic diversity of the symbiotic cyanobacterium Synechococcus spongiarum among sponge hosts
inferredcites →https://doi.org/10.1111/j.1462-2920.2007.01515.xopenalex-snapshot
Diversity and mode of transmission of ammonia‐oxidizing archaea in marine sponges
inferredcites →https://doi.org/10.1111/j.1462-2920.2008.01582.xopenalex-snapshot
Physiology, phylogeny and in situ evidence for bacterial and archaeal nitrifiers in the marine sponge Aplysina aerophoba
inferredcites →https://doi.org/10.1111/j.1462-2920.2008.01600.xopenalex-snapshot
Community composition of ammonia‐oxidizing bacteria and archaea in soils under stands of red alder and Douglas fir in Oregon
inferredcites →https://doi.org/10.1111/j.1462-2920.2008.01704.xopenalex-snapshot
Diversity and expression of nitrogen fixation genes in bacterial symbionts of marine sponges
inferredcites →https://doi.org/10.1111/j.1462-2920.2011.02661.xopenalex-snapshot
Ammonia‐oxidizing archaea as main drivers of nitrification in cold‐water sponges
inferredcites →https://doi.org/10.1111/j.1462-2920.2012.02714.xopenalex-snapshot
Metatranscriptomics of the marine sponge Geodia barretti : tackling phylogeny and function of its microbial community
inferredcites →https://doi.org/10.1111/j.1574-6941.2007.00416.xopenalex-snapshot
Development and application of a PCR-denaturing gradient gel electrophoresis tool to study the diversity of Nitrobacter-like nxrA sequences in soil
inferredcites →https://doi.org/10.1111/mec.13024openalex-snapshot
The putative functional ecology and distribution of archaeal communities in sponges, sediment and seawater in a coral reef environment
inferredcites →https://doi.org/10.1128/aem.00062-07openalex-snapshot
Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
inferredcites →https://doi.org/10.1128/aem.00320-10openalex-snapshot
Enrichment and Physiological Characterization of a Novel Nitrospira -Like Bacterium Obtained from a Marine Sponge
inferredcites →https://doi.org/10.1128/aem.01299-12openalex-snapshot
Capturing Greater 16S rRNA Gene Sequence Diversity within the Domain Bacteria
inferredcites →https://doi.org/10.1128/aem.01541-09openalex-snapshot
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
inferredcites →https://doi.org/10.1128/aem.06516-11openalex-snapshot
DECIPHER, a Search-Based Approach to Chimera Identification for 16S rRNA Sequences
inferredcites →https://doi.org/10.1128/aem.59.5.1354-1360.1993openalex-snapshot
Use of rRNA fluorescence in situ hybridization for measuring the activity of single cells in young and established biofilms
inferredcites →https://doi.org/10.1128/aem.63.12.4704-4712.1997openalex-snapshot
The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations
inferredcites →https://doi.org/10.1128/aem.66.12.5368-5382.2000openalex-snapshot
Phylogeny of All Recognized Species of Ammonia Oxidizers Based on Comparative 16S rRNA and amoA Sequence Analysis: Implications for Molecular Diversity Surveys
inferredcites →https://doi.org/10.1128/aem.68.9.4431-4440.2002openalex-snapshot
Molecular Evidence for a Uniform Microbial Community in Sponges from Different Oceans
inferredcites →https://doi.org/10.1128/aem.71.3.1501-1506.2005openalex-snapshot
Introducing DOTUR, a Computer Program for Defining Operational Taxonomic Units and Estimating Species Richness
inferredcites →https://doi.org/10.1128/mbio.02288-14openalex-snapshot
High-Throughput Metagenomic Technologies for Complex Microbial Community Analysis: Open and Closed Formats
inferredcites →https://doi.org/10.1146/annurev-marine-120709-142819openalex-snapshot
Nitrogen Cycle of the Open Ocean: From Genes to Ecosystems
inferredcites →https://doi.org/10.1146/annurev.micro.55.1.485openalex-snapshot
Ammonia-Oxidizing Bacteria: A Model for Molecular Microbial Ecology
inferredcites →https://doi.org/10.1371/journal.pone.0017699openalex-snapshot
New Approach Using the Real-Time PCR Method for Estimation of the Toxic Marine Dinoflagellate Ostreopsis cf. ovata in Marine Environment
inferredcites →https://doi.org/10.1371/journal.pone.0064848openalex-snapshot
Phylogenetically Diverse ureC Genes and Their Expression Suggest the Urea Utilization by Bacterial Symbionts in Marine Sponge Xestospongia testudinaria
inferredcites →https://doi.org/10.1371/journal.pone.0138837openalex-snapshot
Characterization of Bacterial, Archaeal and Eukaryote Symbionts from Antarctic Sponges Reveals a High Diversity at a Three-Domain Level and a Particular Signature for This Ecosystem
inferredcites →https://doi.org/10.2166/wst.2000.0018openalex-snapshot
Effect of long-term idle periods on the performance of sequencing batch reactors
inferredcites →https://doi.org/10.25365/thesis.29326openalex-snapshot
Exploring the distribution and activity of novel nitrite oxidizers in their natural and environmental habitats
inferredcites →https://doi.org/10.3354/meps156097openalex-snapshot
Sponge-mediated nitrification in tropical benthic communities
inferredcites →https://doi.org/10.3389/fmicb.2015.00364openalex-snapshot
Transcriptional activity of the giant barrel sponge, Xestospongia muta Holobiont: molecular evidence for metabolic interchange
inferredcites →https://doi.org/10.4319/lo.2012.57.3.0711openalex-snapshot
Quantification of ammonia oxidation rates and ammonia‐oxidizing archaea and bacteria at high resolution in the Gulf of California and eastern tropical North Pacific Ocean
inferredcites →https://doi.org/10.7717/peerj.631openalex-snapshot
The role of macrobiota in structuring microbial communities along rocky shores

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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inferred← citeshttps://doi.org/10.1016/j.envpol.2017.08.003openalex-snapshot
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inferred← citeshttps://doi.org/10.1038/s41598-019-49651-7openalex-snapshot
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inferred← citeshttps://doi.org/10.1038/s41598-020-57464-2openalex-snapshot
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