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Metabolite Analysis and Histology on the Exact Same Tissue: Comprehensive Metabolomic Profiling and Metabolic Classification of Prostate Cancer

https://doi.org/10.1038/srep32272
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/ijc.28303openalex-snapshot
Tissue metabolite profiling identifies differentiating and prognostic biomarkers for prostate carcinoma
inferredcites →https://doi.org/10.1002/pros.22704openalex-snapshot
Metabolomic signatures of aggressive prostate cancer
inferredcites →https://doi.org/10.1002/pros.22996openalex-snapshot
Expression of spermidine/spermine N1‐acetyl transferase (SSAT) in human prostate tissues is related to prostate cancer progression and metastasis
inferredcites →https://doi.org/10.1007/s00216-012-6039-yopenalex-snapshot
Current trends and challenges in sample preparation for global metabolomics using liquid chromatography–mass spectrometry
inferredcites →https://doi.org/10.1007/s00726-007-0531-2openalex-snapshot
Regulation of ornithine decarboxylase during oncogenic transformation: mechanisms and therapeutic potential
inferredcites →https://doi.org/10.1016/0304-419x(78)90015-xopenalex-snapshot
Polyamines in rapid growth and cancer
inferredcites →https://doi.org/10.1016/j.ab.2007.10.002openalex-snapshot
High-throughput tissue extraction protocol for NMR- and MS-based metabolomics
inferredcites →https://doi.org/10.1016/j.aca.2015.02.048openalex-snapshot
Improving detection sensitivity of amino acids in thyroid tissues by using phthalic acid as a mobile phase additive in hydrophilic interaction chromatography-electrospray ionization-tandem mass spectrometry
inferredcites →https://doi.org/10.1016/j.chroma.2014.11.050openalex-snapshot
Current state-of-the-art of nontargeted metabolomics based on liquid chromatography–mass spectrometry with special emphasis in clinical applications
inferredcites →https://doi.org/10.1016/j.chroma.2015.12.007openalex-snapshot
Sample normalization methods in quantitative metabolomics
inferredcites →https://doi.org/10.1016/j.eururo.2010.01.035openalex-snapshot
Sarcosine in Urine after Digital Rectal Examination Fails as a Marker in Prostate Cancer Detection and Identification of Aggressive Tumours
inferredcites →https://doi.org/10.1016/j.juro.2010.09.077openalex-snapshot
Sarcosine in Prostate Cancer Tissue is Not a Differential Metabolite for Prostate Cancer Aggressiveness and Biochemical Progression
inferredcites →https://doi.org/10.1016/j.urolonc.2011.08.002openalex-snapshot
Application of metabolomics to prostate cancer
inferredcites →https://doi.org/10.1016/s0090-4295(02)01852-6openalex-snapshot
Technique of da vinci robot-assisted anatomic radical prostatectomy
inferredcites →https://doi.org/10.1021/ac102146gopenalex-snapshot
High-Performance Isotope Labeling for Profiling Carboxylic Acid-Containing Metabolites in Biofluids by Mass Spectrometry
inferredcites →https://doi.org/10.1021/ac301984topenalex-snapshot
Comprehensive and Highly Sensitive Urinary Steroid Hormone Profiling Method Based on Stable Isotope-Labeling Liquid Chromatography–Mass Spectrometry
inferredcites →https://doi.org/10.1021/ac3025625openalex-snapshot
Determination of Total Concentration of Chemically Labeled Metabolites as a Means of Metabolome Sample Normalization and Sample Loading Optimization in Mass Spectrometry-Based Metabolomics
inferredcites →https://doi.org/10.1021/ac400099bopenalex-snapshot
MyCompoundID: Using an Evidence-Based Metabolome Library for Metabolite Identification
inferredcites →https://doi.org/10.1021/ac5011684openalex-snapshot
Development of a Universal Metabolome-Standard Method for Long-Term LC–MS Metabolome Profiling and Its Application for Bladder Cancer Urine-Metabolite-Biomarker Discovery
inferredcites →https://doi.org/10.1021/ac5023315openalex-snapshot
Profiling of Thiol-Containing Compounds by Stable Isotope Labeling Double Precursor Ion Scan Mass Spectrometry
inferredcites →https://doi.org/10.1021/ac900166aopenalex-snapshot
Differential 12 C-/ 13 C-Isotope Dansylation Labeling and Fast Liquid Chromatography/Mass Spectrometry for Absolute and Relative Quantification of the Metabolome
inferredcites →https://doi.org/10.1021/acs.analchem.5b01434openalex-snapshot
Quantitative Metabolome Analysis Based on Chromatographic Peak Reconstruction in Chemical Isotope Labeling Liquid Chromatography Mass Spectrometry
inferredcites →https://doi.org/10.1021/acs.analchem.5b02282openalex-snapshot
DnsID in MyCompoundID for Rapid Identification of Dansylated Amine- and Phenol-Containing Metabolites in LC–MS-Based Metabolomics
inferredcites →https://doi.org/10.1038/bjc.1997.445openalex-snapshot
A case-control study of diet and prostate cancer
inferredcites →https://doi.org/10.1038/nature07762openalex-snapshot
Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression
inferredcites →https://doi.org/10.1038/ncpuro0487openalex-snapshot
Primer: tissue fixation and preservation for optimal molecular analysis of urologic tissues
inferredcites →https://doi.org/10.1038/nprot.2011.319openalex-snapshot
Web-based inference of biological patterns, functions and pathways from metabolomic data using MetaboAnalyst
inferredcites →https://doi.org/10.1038/nrc3038openalex-snapshot
Otto Warburg's contributions to current concepts of cancer metabolism
inferredcites →https://doi.org/10.1074/jbc.m804714200openalex-snapshot
Identification and Characterization of a Diamine Exporter in Colon Epithelial Cells
inferredcites →https://doi.org/10.1093/jnci/90.16.1219openalex-snapshot
Study of Prediagnostic Selenium Level in Toenails and the Risk of Advanced Prostate Cancer
inferredcites →https://doi.org/10.1093/nar/gks1065openalex-snapshot
HMDB 3.0—The Human Metabolome Database in 2013
inferredcites →https://doi.org/10.1158/1055-9965.epi-08-1193openalex-snapshot
One-Carbon Metabolism and Prostate Cancer Risk: Prospective Investigation of Seven Circulating B Vitamins and Metabolites
inferredcites →https://doi.org/10.1158/1940-6207.capr-14-0058openalex-snapshot
Plasma Tocopherols and Risk of Prostate Cancer in the Selenium and Vitamin E Cancer Prevention Trial (SELECT)
inferredcites →https://doi.org/10.1186/1471-2490-15-4openalex-snapshot
Spleen injury following left extracorporeal shockwave lithotripsy (ESWL)
inferredcites →https://doi.org/10.1186/1472-6890-11-14openalex-snapshot
Molecular preservation by extraction and fixation, mPREF: a method for small molecule biomarker analysis and histology on exactly the same tissue
inferredcites →https://doi.org/10.1186/1756-9966-30-9openalex-snapshot
Stem cells in clinical practice: applications and warnings
inferredcites →https://doi.org/10.1186/1756-9966-30-95openalex-snapshot
The mechanisms by which polyamines accelerate tumor spread
inferredcites →https://doi.org/10.1186/gm332openalex-snapshot
Cancer detection and biopsy classification using concurrent histopathological and metabolomic analysis of core biopsies
inferredcites →https://doi.org/10.1186/s12894-015-0095-5openalex-snapshot
A case control study of sarcosine as an early prostate cancer detection biomarker
inferredcites →https://doi.org/10.1371/journal.pone.0062375openalex-snapshot
Spermine and Citrate as Metabolic Biomarkers for Assessing Prostate Cancer Aggressiveness
inferredcites →https://doi.org/10.1371/journal.pone.0075199openalex-snapshot
IVIg Immune Reconstitution Treatment Alleviates the State of Persistent Immune Activation and Suppressed CD4 T Cell Counts in CVID
inferredcites →https://doi.org/10.1371/journal.pone.0136902openalex-snapshot
An Optimized Method of Metabolite Extraction from Formalin-Fixed Paraffin-Embedded Tissue for GC/MS Analysis
inferredcites →https://doi.org/10.1373/clinchem.2015.243576openalex-snapshot
Candidate Reference Measurement Procedure for the Quantification of Total Serum Cortisol with LC-MS/MS
inferredcites →https://doi.org/10.1517/14728222.2015.1005603openalex-snapshot
Targeting the 5′-AMP-activated protein kinase and related metabolic pathways for the treatment of prostate cancer
inferredcites →https://doi.org/10.25405/ncl.34209780openalex-snapshot
Mitochondria, Prostate Cancer, and Biopsy Sampling Error
inferredcites →https://doi.org/10.4155/bio.13.348openalex-snapshot
Stable Isotope-Labeling Studies in Metabolomics: New Insights Into Structure and Dynamics of Metabolic Networks

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Impact of Phenolic Compounds in the Soil on Plant Growth and Stem Gall-Forming
inferred← citeshttps://doi.org/10.1002/nbm.4694openalex-snapshot
Prediction of recurrence from metabolites and expression of TOP2A and EZH2 in prostate cancer patients treated with radiotherapy
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Chemical Isotope Labeling LC-MS for Metabolomics
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Metabolic profiling of amniotic fluid by differential 12C-/13C-isotope dansylation labeling LC-MS for application in trisomy 21 fetuses
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Integrated analyses utilizing metabolomics and transcriptomics reveal perturbation of the polyamine pathway in oral cavity squamous cell carcinoma
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A new method for investigating microbiota-produced small molecules in adenomatous polyps
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Development of a method for dansylation of metabolites using organic solvent-compatible buffer systems for amine/phenol submetabolome analysis
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Metabolic alterations in tissues and biofluids of patients with prostate cancer
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Geographical discrimination and authentication of Chinese garlic based on multi-element, volatile and metabolomics profiling combined with chemometrics
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Effect of phenolics on soil microbe distribution, plant growth, and gall formation
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Untargeted GC–MS investigation of serum metabolomics of coronary artery disease patients
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Evaluation of prostate cancer tissue metabolomics: would clinics utilise it for diagnosis?
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Chemical Tagging in Mass Spectrometry for Systems Biology
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Chemical Isotope Labeling Exposome (CIL-EXPOSOME): One High-Throughput Platform for Human Urinary Global Exposome Characterization
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Comparison of methanol fixation versus cryopreservation of the placenta for metabolomics analysis
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Novel plasma metabolite markers of attention-deficit/hyperactivity disorder identified using high-performance chemical isotope labelling-based liquid chromatography-mass spectrometry
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Metabolic Alteration in Plasma and Biopsies From Patients With IBD
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Metabolomics at the Interface of Personalized Cancer Vaccination and Immune Responsiveness
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A Novel Method to Generate Analyte-Specific Specimens for Multi-Omic Studies of Primary Bladder Cancer
inferred← citeshttps://doi.org/10.1186/s12885-020-06908-zopenalex-snapshot
Comprehensive metabolomics analysis of prostate cancer tissue in relation to tumor aggressiveness and TMPRSS2-ERG fusion status
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Metabolic control of gene transcription in non-alcoholic fatty liver disease: the role of the epigenome
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Preanalytical Processing and Biobanking Procedures of Biological Samples for Metabolomics Research: A White Paper, Community Perspective (for “Precision Medicine and Pharmacometabolomics Task Group”—The Metabolomics Society Initiative)
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Metabolic heterogeneity signature of primary treatment-naïve prostate cancer
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Integrating Histology and Attenuated Total Reflectance Fourier Transformed Infrared Spectroscopy to Estimate the Postmortem Interval in Rat Liver
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Metabolomics Biomarkers of Prostate Cancer: A Systematic Review
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Metabolomics and Multi-Omics Integration: A Survey of Computational Methods and Resources
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