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Complete mitochondrial genomes of Trisidos kiyoni and Potiarca pilula: Varied mitochondrial genome size and highly rearranged gene order in Arcidae

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Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1007/978-94-011-4309-7_13openalex-snapshot
The Duplication/Random Loss Model for Gene Rearrangement Exemplified by Mitochondrial Genomes of Deuterostome Animals
inferredcites →https://doi.org/10.1007/bf00166595openalex-snapshot
Synonymous and nonsynonymous substitutions in mammalian genes and the nearly neutral theory
inferredcites →https://doi.org/10.1007/bf01215182openalex-snapshot
Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes
inferredcites →https://doi.org/10.1007/bf02352278openalex-snapshot
Free-radical-induced mutation vs redox regulation: Costs and benefits of genes in organelles
inferredcites →https://doi.org/10.1007/s00239-001-0039-4openalex-snapshot
The Cephalopod Loligo bleekeri Mitochondrial Genome: Multiplied Noncoding Regions and Transposition of tRNA Genes
inferredcites →https://doi.org/10.1007/s00239-004-2607-xopenalex-snapshot
Covariation of Mitochondrial Genome Size with Gene Lengths: Evidence for Gene Length Reduction During Mitochondrial Evolution
inferredcites →https://doi.org/10.1007/s00239-007-9016-xopenalex-snapshot
Complete Mitochondrial DNA Sequence of the Scallop Placopecten magellanicus: Evidence of Transposition Leading to an Uncharacteristically Large Mitochondrial Genome
inferredcites →https://doi.org/10.1007/s00239-009-9308-4openalex-snapshot
The Mitochondrial Genomes of Two Scallops, Argopecten irradians and Chlamys farreri (Mollusca: Bivalvia): The Most Highly Rearranged Gene Order in the Family Pectinidae
inferredcites →https://doi.org/10.1007/s002940100188openalex-snapshot
Gender-associated mitochondrial DNA heteroplasmy in the venerid clam Tapes philippinarum (Mollusca Bivalvia)
inferredcites →https://doi.org/10.1007/s10126-005-0004-0openalex-snapshot
Complete Mitochondrial DNA Sequence of the Eastern Oyster Crassostrea virginica
inferredcites →https://doi.org/10.1007/s10126-005-0013-zopenalex-snapshot
Mitochondrial DNA Sequence and Gene Organization in the Australian Blacklip Abalone Haliotis rubra (Leach)
inferredcites →https://doi.org/10.1007/s11033-010-0449-8openalex-snapshot
The complete mitochondrial genome of the hard clam Meretrix meretrix
inferredcites →https://doi.org/10.1007/s11033-010-9974-8openalex-snapshot
Complete mitochondrial DNA sequence and phylogenetic analysis of Zhikong scallop Chlamys farreri (Bivalvia: Pectinidae)
inferredcites →https://doi.org/10.1007/s11692-012-9195-2openalex-snapshot
Biparental Inheritance Through Uniparental Transmission: The Doubly Uniparental Inheritance (DUI) of Mitochondrial DNA
inferredcites →https://doi.org/10.1016/j.cbd.2010.07.003openalex-snapshot
Complete mtDNA of Meretrix lusoria (Bivalvia: Veneridae) reveals the presence of an atp8 gene, length variation and heteroplasmy in the control region
inferredcites →https://doi.org/10.1016/j.cbd.2012.12.003openalex-snapshot
Complete mitochondrial DNA sequence of the ark shell Scapharca broughtonii: An ultra-large metazoan mitochondrial genome
inferredcites →https://doi.org/10.1016/j.cbd.2015.08.001openalex-snapshot
Complete mitochondrial genome of Anadara vellicata (Bivalvia: Arcidae): A unique gene order and large atypical non-coding region
inferredcites →https://doi.org/10.1016/j.gene.2004.11.019openalex-snapshot
Mutation and selection on the anticodon of tRNA genes in vertebrate mitochondrial genomes
inferredcites →https://doi.org/10.1016/j.gene.2014.12.011openalex-snapshot
The complete mitochondrial DNA of Tegillarca granosa and comparative mitogenomic analyses of three Arcidae species
inferredcites →https://doi.org/10.1016/j.gene.2015.11.043openalex-snapshot
The complete mitochondrial genome of the golden mussel Limnoperna fortunei and comparative mitogenomics of Mytilidae
inferredcites →https://doi.org/10.1016/j.margen.2011.06.006openalex-snapshot
Complete mtDNA of the Meretrix lamarckii (Bivalvia: Veneridae) and molecular identification of suspected M. lamarckii based on the whole mitochondrial genome
inferredcites →https://doi.org/10.1016/j.tig.2003.10.012openalex-snapshot
Mitochondrial genomes: anything goes
inferredcites →https://doi.org/10.1016/j.tig.2007.05.011openalex-snapshot
The unusual system of doubly uniparental inheritance of mtDNA: isn’t one enough?
inferredcites →https://doi.org/10.1016/j.ympev.2003.08.007openalex-snapshot
The complete sequence and gene organization of the mitochondrial genome of the gadilid scaphopod Siphonondentalium lobatum (Mollusca)
inferredcites →https://doi.org/10.1016/j.ympev.2005.10.018openalex-snapshot
Extensive mitochondrial gene arrangements in coleoid Cephalopoda and their phylogenetic implications
inferredcites →https://doi.org/10.1016/j.ympev.2008.05.022openalex-snapshot
Structure and evolution of the mitochondrial genomes of Haematobia irritans and Stomoxys calcitrans: The Muscidae (Diptera: Calyptratae) perspective
inferredcites →https://doi.org/10.1016/j.ympev.2010.05.029openalex-snapshot
Comparison of seven Crassostrea mitogenomes and phylogenetic analyses
inferredcites →https://doi.org/10.1016/j.ympev.2012.11.017openalex-snapshot
Mitogenomics does not resolve deep molluscan relationships (yet?)
inferredcites →https://doi.org/10.1016/j.ympev.2015.11.008openalex-snapshot
Comparative analysis of complete mitochondrial genomes suggests that relaxed purifying selection is driving high nonsynonymous evolutionary rate of the NADH2 gene in whitefish (Coregonus ssp.)
inferredcites →https://doi.org/10.1016/s0014-5793(02)02328-1openalex-snapshot
The minimal tRNA: unique structure of Ascaris suum mitochondrial tRNA Ser UCU having a short T arm and lacking the entire D arm
inferredcites →https://doi.org/10.1016/s0074-7696(08)62066-5openalex-snapshot
Animal Mitochondrial DNA: Structure and Evolution
inferredcites →https://doi.org/10.1016/s0169-5347(00)02084-xopenalex-snapshot
Reducing the genome size of organelles favours gene transfer to the nucleus
inferredcites →https://doi.org/10.1016/s0378-1119(99)00270-xopenalex-snapshot
Evolutionary genomics in Metazoa: the mitochondrial DNA as a model system
inferredcites →https://doi.org/10.1016/s0959-437x(98)80035-xopenalex-snapshot
Big trees from little genomes: mitochondrial gene order as a phylogenetic tool
inferredcites →https://doi.org/10.1016/s1672-0229(10)60008-3openalex-snapshot
KaKs_Calculator 2.0: A Toolkit Incorporating Gamma-Series Methods and Sliding Window Strategies
inferredcites →https://doi.org/10.1038/325728a0openalex-snapshot
Coevolution of codon usage and transfer RNA abundance
inferredcites →https://doi.org/10.1038/hdy.2008.62openalex-snapshot
Evolution of the mitochondrial genome of Metazoa as exemplified by comparison of congeneric species
inferredcites →https://doi.org/10.1038/sj.emboj.7600811openalex-snapshot
Dual‐mode recognition of noncanonical tRNAsSer by seryl‐tRNA synthetase in mammalian mitochondria
inferredcites →https://doi.org/10.1038/srep20972openalex-snapshot
Comparative and phylogenetic analysis of the mitochondrial genomes in basal hymenopterans
inferredcites →https://doi.org/10.1080/10635150590947843openalex-snapshot
Evidence for Multiple Reversals of Asymmetric Mutational Constraints during the Evolution of the Mitochondrial Genome of Metazoa, and Consequences for Phylogenetic Inferences
inferredcites →https://doi.org/10.1080/10635150802429642openalex-snapshot
A Rapid Bootstrap Algorithm for the RAxML Web Servers
inferredcites →https://doi.org/10.1080/19401730902964425openalex-snapshot
The complete mitochondrial genome of the clamMeretrix petechialis(Mollusca: Bivalvia: Veneridae)
inferredcites →https://doi.org/10.1093/bioinformatics/bth352openalex-snapshot
Automatic annotation of organellar genomes with DOGMA
inferredcites →https://doi.org/10.1093/bioinformatics/bti054openalex-snapshot
Circular genome visualization and exploration using CGView
inferredcites →https://doi.org/10.1093/bioinformatics/btm573openalex-snapshot
ARWEN: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences
inferredcites →https://doi.org/10.1093/gbe/evt112openalex-snapshot
Structure, Transcription, and Variability of Metazoan Mitochondrial Genome: Perspectives from an Unusual Mitochondrial Inheritance System
inferredcites →https://doi.org/10.1093/molbev/msg218openalex-snapshot
Complete mtDNA Sequence of the North American Freshwater Mussel, Lampsilis ornata (Unionidae): An Examination of the Evolution and Phylogenetic Utility of Mitochondrial Genome Organization in Bivalvia (Mollusca)
inferredcites →https://doi.org/10.1093/molbev/msh096openalex-snapshot
The Complete Mitochondrial Genome Sequence of the Spider Habronattus oregonensis Reveals Rearranged and Extremely Truncated tRNAs
inferredcites →https://doi.org/10.1093/molbev/msh227openalex-snapshot
Long-Term Conservation of Six Duplicated Structural Genes in Cephalopod Mitochondrial Genomes
inferredcites →https://doi.org/10.1093/molbev/msn083openalex-snapshot
jModelTest: Phylogenetic Model Averaging
inferredcites →https://doi.org/10.1093/molbev/msr121openalex-snapshot
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
inferredcites →https://doi.org/10.1093/nar/27.2.573openalex-snapshot
Tandem repeats finder: a program to analyze DNA sequences
inferredcites →https://doi.org/10.1093/nar/27.8.1767openalex-snapshot
Animal mitochondrial genomes
inferredcites →https://doi.org/10.1093/nar/gkg595openalex-snapshot
Mfold web server for nucleic acid folding and hybridization prediction
inferredcites →https://doi.org/10.1093/nar/gki198openalex-snapshot
MAFFT version 5: improvement in accuracy of multiple sequence alignment
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a025917openalex-snapshot
Do the combined effects of the asymmetric process of replication and DNA damage from oxygen radicals produce a mutation-rate signature in the mitochondrial genome?
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026011openalex-snapshot
Asymmetrical directional mutation pressure in the mitochondrial genome of mammals
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a026236openalex-snapshot
Estimating Synonymous and Nonsynonymous Substitution Rates Under Realistic Evolutionary Models
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040442openalex-snapshot
Slipped-strand mispairing: a major mechanism for DNA sequence evolution.
inferredcites →https://doi.org/10.1093/oxfordjournals.molbev.a040666openalex-snapshot
An extreme codon preference strategy: codon reassignment.
inferredcites →https://doi.org/10.1111/j.1096-3642.2006.00256.xopenalex-snapshot
The Arcoidea (Mollusca: Bivalvia): a review of the current phenetic-based systematics
inferredcites →https://doi.org/10.1146/annurev.biochem.66.1.409openalex-snapshot
MITOCHONDRIAL DNA MAINTENANCE IN VERTEBRATES
inferredcites →https://doi.org/10.1146/annurev.genom.4.020303.162528openalex-snapshot
Sequence Divergence, Functional Constraint, and Selection in Protein Evolution
inferredcites →https://doi.org/10.1186/1471-2148-10-394openalex-snapshot
Unusual conservation of mitochondrial gene order in Crassostreaoysters: evidence for recent speciation in Asia
inferredcites →https://doi.org/10.1186/1471-2164-7-182openalex-snapshot
The complete sequence of the mitochondrial genome of Nautilus macromphalus (Mollusca: Cephalopoda)
inferredcites →https://doi.org/10.1186/1742-9994-3-1openalex-snapshot
Single locus complementary sex determination in Hymenoptera: an "unintelligent" design?
inferredcites →https://doi.org/10.1186/1742-9994-3-13openalex-snapshot
The complete sequences and gene organisation of the mitochondrial genomes of the heterodont bivalves Acanthocardia tuberculata and Hiatella arctica – and the first record for a putative Atpase subunit 8 gene in marine bivalves
inferredcites →https://doi.org/10.1525/california/9780520250925.003.0017openalex-snapshot
Molluscan Evolutionary Genomics
inferredcites →https://doi.org/10.2307/1483846openalex-snapshot
Treatise on Invertebrate Paleontology
inferredcites →https://doi.org/10.3109/19401736.2013.865174openalex-snapshot
The complete mitochondrial genome ofScapharca kagoshimensis(Bivalvia: Arcidae)
inferredcites →https://doi.org/10.5281/zenodo.15145663openalex-snapshot
Table 1 in A new Gammarus species from Xinjiang Uygur Autonomous Region (China) with a key to Xinjiang freshwater gammarids (Crustacea, Amphipoda, Gammaridae)
inferredcites →https://doi.org/10.7150/ijbs.12358openalex-snapshot
The Complete Mitochondrial Genome of two Tetragnatha Spiders (Araneae: Tetragnathidae): Severe Truncation of tRNAs and Novel Gene Rearrangements in Araneae

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.3897/zookeys.1240.141126zenodo-depositor-declared
The complete mitochondrial genome of Siphonaria japonica (Heterobranchia, Siphonariidae) and its phylogenetic implications
inferred← citeshttps://doi.org/10.1007/s00227-023-04254-9openalex-snapshot
A vignette of mitogenome and evolutionary status of the giant form of Sthenoteuthis oualaniensis (Lesson, 1830) endemic to the northwestern Arabian Sea
inferred← citeshttps://doi.org/10.1007/s00338-020-02039-wopenalex-snapshot
Genome skimming resolves the giant clam (Bivalvia: Cardiidae: Tridacninae) tree of life
inferred← citeshttps://doi.org/10.1007/s11802-021-4707-2openalex-snapshot
Relaxation of Selective Constraint on the Ultra-Large Mitochondrial Genomes of Arcidae (Mollusca: Bivalvia)
inferred← citeshttps://doi.org/10.1016/j.heliyon.2024.e27697openalex-snapshot
Mitochondrial genome comparison and phylogenetic position of Fannia pusio among the Calyptratae flies
inferred← citeshttps://doi.org/10.1016/j.ijbiomac.2020.07.142openalex-snapshot
The complete mitochondrial genome of the medicinal fish, Cyprinion semiplotum: Insight into its structural features and phylogenetic implications
inferred← citeshttps://doi.org/10.1016/j.ygeno.2020.06.036openalex-snapshot
Population genetics and comparative mitogenomic analyses reveal cryptic diversity of Amphioctopus neglectus (Cephalopoda: Octopodidae)
inferred← citeshttps://doi.org/10.1016/j.ympev.2020.106857openalex-snapshot
Mitogenomics reveals phylogenetic relationships of Arcoida (Mollusca, Bivalvia) and multiple independent expansions and contractions in mitochondrial genome size
inferred← citeshttps://doi.org/10.1016/j.ympev.2020.106879openalex-snapshot
Evolution of mitochondrial gene arrangements in Arcidae (Bivalvia: Arcida) and their phylogenetic implications
inferred← citeshttps://doi.org/10.1080/13235818.2024.2333723openalex-snapshot
Mitogenomic profiling of Marcia recens (Holten, 1802): a step towards taxonomic resolution of India's Ashtamudi short-neck clam
inferred← citeshttps://doi.org/10.1111/jzs.12478openalex-snapshot
Descriptive study of the mitogenome of the diamondback squid ( Thysanoteuthis rhombus Troschel, 1857) and the evolution of mitogenome arrangement in oceanic squids
inferred← citeshttps://doi.org/10.1186/s12864-019-6026-1openalex-snapshot
Arm-less mitochondrial tRNAs conserved for over 30 millions of years in spiders
inferred← citeshttps://doi.org/10.3389/fmars.2022.1016779openalex-snapshot
The complete paternally inherited mitochondrial genomes of three clam species in genus Macridiscus (Bivalvia: Veneridae): A TDRL model of dimer-mitogenome rearrangement of doubly uniparental inheritance
inferred← citeshttps://doi.org/10.3390/fishes7060317openalex-snapshot
The Complete Mitochondrial Genome of Hyotissa hyotis (Bivalvia: Gryphaeidae) Reveals a Unique Gene Order within Ostreoidea
inferred← citeshttps://doi.org/10.3390/genes13112157openalex-snapshot
Full Mitochondrial Genomes Reveal Species Differences between the Venerid Clams Ruditapes philippinarum and R. variegatus
inferred← citeshttps://doi.org/10.3390/ijms251810181openalex-snapshot
The Complete Mitochondrial Genome of the Siberian Scoter Melanitta stejnegeri and Its Phylogenetic Relationship in Anseriformes
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