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Quantitative analysis of dinoflagellates and diatoms community via Miseq sequencing of actin gene and v9 region of 18S rDNA

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Whole genome amplification induced bias in the detection of KRAS‐mutated cell populations during colorectal carcinoma tissue testing
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Culture of Phytoplankton for Feeding Marine Invertebrates
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Extraction of DNA from milligram amounts of fresh, herbarium and mummified plant tissues
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Bacterial communities in different sections of a municipal wastewater treatment plant revealed by 16S rDNA 454 pyrosequencing
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Preliminary comparison of quantification efficiency between DNA-derived dataset and cell-derived dataset of mixed diatom sample based on rDNA-ITS sequence analysis
inferredcites →https://doi.org/10.1038/ismej.2013.253openalex-snapshot
Links between plant and fungal communities across a deforestation chronosequence in the Amazon rainforest
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UPARSE: highly accurate OTU sequences from microbial amplicon reads
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QIIME allows analysis of high-throughput community sequencing data
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UCHIME improves sensitivity and speed of chimera detection
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FLASH: fast length adjustment of short reads to improve genome assemblies
inferredcites →https://doi.org/10.1093/molbev/msq332openalex-snapshot
Dynamics of Actin Evolution in Dinoflagellates
inferredcites →https://doi.org/10.1111/1755-0998.12105openalex-snapshot
Next‐generation sequencing to inventory taxonomic diversity in eukaryotic communities: a test for freshwater diatoms
inferredcites →https://doi.org/10.1111/j.1365-294x.2009.04480.xopenalex-snapshot
Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water
inferredcites →https://doi.org/10.1111/j.1462-2920.2010.02332.xopenalex-snapshot
Depicting more accurate pictures of protistan community complexity using pyrosequencing of hypervariable SSU rRNA gene regions
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Comparing High‐throughput Platforms for Sequencing the V4 Region of SSU‐r DNA in Environmental Microbial Eukaryotic Diversity Surveys
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High‐throughput amplicon sequencing of r RNA genes requires a copy number correction to accurately reflect the effects of management practices on soil nematode community structure
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Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
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Improved Selection of Internal Transcribed Spacer-Specific Primers Enables Quantitative, Ultra-High-Throughput Profiling of Fungal Communities
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A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes
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Identifying and Characterizing Alternative Molecular Markers for the Symbiotic and Free-Living Dinoflagellate Genus Symbiodinium
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PCR Biases Distort Bacterial and Archaeal Community Structure in Pyrosequencing Datasets
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Localization and Copy Number of the Protein-Coding Genes Actin, α-Tubulin, and HSP90 in the Nucleus of a Primitive Dinoflagellate,Oxyrrhis marina
inferredcites →https://doi.org/10.2307/1934984openalex-snapshot
Relative Diversity Indices
inferredcites →https://doi.org/10.48550/arxiv.1308.6333openalex-snapshot
TreeOTU: Operational Taxonomic Unit Classification Based on Phylogenetic Trees
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Multi-gene analysis of the symbiotic and free-living dinoflagellate genus Symbiodinium

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Assessment of biomass potentials of microalgal communities in open pond raceways using mass cultivation
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