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Transcriptomic sequencing reveals the response of Dunaliella salina to copper stress via the increased photosynthesis and carbon mechanism

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Outgoing claims: the papers this work cites, builds on, or argues with.

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Transcriptome Analysis Using RNA-Seq
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Heavy-Metal-Induced Reactive Oxygen Species: Phytotoxicity and Physicochemical Changes in Plants
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Induction of Oxidative Stress in the Red Macroalga Gracilaria tenuistipitata by Pollutant Metals
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Effects of titanium nanoparticles on the photosynthesis, respiration, and physiological parameters in Dunaliella salina and Dunaliella tertiolecta
inferredcites →https://doi.org/10.1007/s00775-014-1129-2openalex-snapshot
Diversity of the metal-transporting P1B-type ATPases
inferredcites →https://doi.org/10.1007/s00792-015-0746-1openalex-snapshot
Transcriptional response to copper excess and identification of genes involved in heavy metal tolerance in the extremophilic microalga Chlamydomonas acidophila
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Isolation and characterization of PSI–LHCI super-complex and their sub-complexes from a red alga Cyanidioschyzon merolae
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Structure–function of the cytochrome b6f lipoprotein complex: a scientific odyssey and personal perspective
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Effects of Cu2+ and Zn2+ on growth and physiological characteristics of green algae, Cladophora
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Toxicity of Cu (II) to the green alga Chlorella vulgaris: a perspective of photosynthesis and oxidant stress
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Physiological damages of Sargassum cymosum and Hypnea pseudomusciformis exposed to trace metals from mining tailing
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Glycolytic Enzyme Activities and Gene Expression in Cicer arietinum Exposed to Water-Deficit Stress
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The Variations of Glycolysis and TCA Cycle Intermediate Levels Grown in Iron and Copper Mediums of Trichoderma harzianum
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Photosynthetic and biochemical responses of the freshwater green algae Closterium ehrenbergii Meneghini (Conjugatophyceae) exposed to the metal coppers and its implication for toxicity testing
inferredcites →https://doi.org/10.1007/s13258-017-0611-yopenalex-snapshot
Transcriptional profiling of antioxidant defense system and heat shock protein (Hsp) families in the cadmium- and copper-exposed marine ciliate Euplotes crassu
inferredcites →https://doi.org/10.1016/j.aquatox.2008.06.003openalex-snapshot
Uptake and internalisation of copper by three marine microalgae: Comparison of copper-sensitive and copper-tolerant species
inferredcites →https://doi.org/10.1016/j.aquatox.2016.06.017openalex-snapshot
Copper-induced overexpression of genes encoding antioxidant system enzymes and metallothioneins involve the activation of CaMs, CDPKs and MEK1/2 in the marine alga Ulva compressa
inferredcites →https://doi.org/10.1016/j.aquatox.2018.12.007openalex-snapshot
Transcriptional and physiological responses of Dunaliella salina to cadmium reveals time-dependent turnover of ribosome, photosystem, and ROS-scavenging pathways
inferredcites →https://doi.org/10.1016/j.bbamcr.2012.04.010openalex-snapshot
The ins and outs of algal metal transport
inferredcites →https://doi.org/10.1016/j.bioeng.2005.07.001openalex-snapshot
Physiological responses of Dunaliella salina and Dunaliella tertiolecta to copper toxicity
inferredcites →https://doi.org/10.1016/j.biortech.2019.122509openalex-snapshot
Biorefinery of Dunaliella salina: Sustainable recovery of carotenoids, polar lipids and glycerol
inferredcites →https://doi.org/10.1016/j.chemosphere.2020.127436openalex-snapshot
Copper uptake, essentiality, toxicity, detoxification and risk assessment in soil-plant environment
inferredcites →https://doi.org/10.1016/j.ecoenv.2014.10.028openalex-snapshot
Excess copper induced proteomic changes in the marine brown algae Sargassum fusiforme
inferredcites →https://doi.org/10.1016/j.ecoenv.2016.11.002openalex-snapshot
Phytochelatin synthesis in Dunaliella salina induced by arsenite and arsenate under various phosphate regimes
inferredcites →https://doi.org/10.1016/j.envpol.2008.07.028openalex-snapshot
Hormesis and plant biology
inferredcites →https://doi.org/10.1016/j.envpol.2019.04.032openalex-snapshot
Comparative study of Cu uptake and early transcriptome responses in the green microalga Chlamydomonas reinhardtii and the macrophyte Elodea nuttallii
inferredcites →https://doi.org/10.1016/j.hal.2016.05.004openalex-snapshot
Genome-wide analysis of transcription and photosynthesis inhibition in the harmful dinoflagellate Prorocentrum minimum in response to the biocide copper sulfate
inferredcites →https://doi.org/10.1016/j.jphotobiol.2011.02.003openalex-snapshot
P680 (PD1PD2) and ChlD1 as alternative electron donors in photosystem II core complexes and isolated reaction centers
inferredcites →https://doi.org/10.1016/j.jphotobiol.2017.05.038openalex-snapshot
ROS and calcium signaling mediated pathways involved in stress responses of the marine microalgae Dunaliella salina to enhanced UV-B radiation
inferredcites →https://doi.org/10.1016/j.marenvres.2017.08.002openalex-snapshot
Copper effects on biomarkers associated with photosynthesis, oxidative status and calcification in the Brazilian coral Mussismilia harttii (Scleractinia, Mussidae)
inferredcites →https://doi.org/10.1016/j.marpolbul.2017.03.038openalex-snapshot
Photosynthetic and transcriptional responses of the marine diatom Thalassiosira pseudonana to the combined effect of temperature stress and copper exposure
inferredcites →https://doi.org/10.1016/j.pbi.2016.03.004openalex-snapshot
Regulation of Rubisco gene expression in C4 plants
inferredcites →https://doi.org/10.1016/j.scitotenv.2020.137413openalex-snapshot
Comparative assessment of trace element accumulation and biomonitoring in seaweed Ulva lactuca and seagrass Posidonia oceanica
inferredcites →https://doi.org/10.1016/j.ygeno.2007.03.012openalex-snapshot
Genomic organization and imprinting of the Peg3 domain in bovine
inferredcites →https://doi.org/10.1038/nbt.1883openalex-snapshot
Full-length transcriptome assembly from RNA-Seq data without a reference genome
inferredcites →https://doi.org/10.1038/s41477-019-0380-5openalex-snapshot
Antenna arrangement and energy transfer pathways of a green algal photosystem-I–LHCI supercomplex
inferredcites →https://doi.org/10.1039/c1mb05218gopenalex-snapshot
Protein–protein interactions by molecular modeling and biochemical characterization of PSI-LHCI supercomplexes from Chlamydomonas reinhardtii
inferredcites →https://doi.org/10.1039/c9mt00078jopenalex-snapshot
Copper and iron metabolism in Ostreococcus tauri – the role of phytotransferrin, plastocyanin and a chloroplast copper-transporting ATPase
inferredcites →https://doi.org/10.1042/ebc20160016openalex-snapshot
Photosynthesis
inferredcites →https://doi.org/10.1046/j.1432-1327.1999.00042.xopenalex-snapshot
Investigation of the structure of spinach photosystem II reaction center complex
inferredcites →https://doi.org/10.1074/jbc.m114.574822openalex-snapshot
Cross-linking Evidence for Multiple Interactions of the PsbP and PsbQ Proteins in a Higher Plant Photosystem II Supercomplex
inferredcites →https://doi.org/10.1080/15592324.2018.1460048openalex-snapshot
Oxidative and genotoxic damages in plants in response to heavy metal stress and maintenance of genome stability
inferredcites →https://doi.org/10.1093/pcp/pcz026openalex-snapshot
The PSI–PSII Megacomplex in Green Plants
inferredcites →https://doi.org/10.1104/pp.85.2.570openalex-snapshot
Increased Levels of Peroxisomal Active Oxygen-Related Enzymes in Copper-Tolerant Pea Plants
inferredcites →https://doi.org/10.1105/tpc.108.064907openalex-snapshot
Two Chlamydomonas CTR Copper Transporters with a Novel Cys-Met Motif Are Localized to the Plasma Membrane and Function in Copper Assimilation
inferredcites →https://doi.org/10.1111/j.1440-1681.2011.05599.xopenalex-snapshot
GAPDH: A common enzyme with uncommon functions
inferredcites →https://doi.org/10.1111/pbi.12659openalex-snapshot
The heat‐shock protein/chaperone network and multiple stress resistance
inferredcites →https://doi.org/10.1111/ppl.12940openalex-snapshot
Comparative analysis of plastocyanin–cytochrome f complex formation in higher plants, green algae and cyanobacteria
inferredcites →https://doi.org/10.1146/annurev-biochem-013118-110903openalex-snapshot
Structure and Mechanisms of F-Type ATP Synthases
inferredcites →https://doi.org/10.1186/1471-2105-12-1openalex-snapshot
MTML-msBayes: Approximate Bayesian comparative phylogeographic inference from multiple taxa and multiple loci with rate heterogeneity
inferredcites →https://doi.org/10.1186/1471-2105-12-323openalex-snapshot
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
inferredcites →https://doi.org/10.1186/1471-2164-13-1openalex-snapshot
Optimizing illumina next-generation sequencing library preparation for extremely at-biased genomes
inferredcites →https://doi.org/10.1186/1471-2164-13-565openalex-snapshot
De novo sequencing and analysis of the Ulva linza transcriptome to discover putative mechanisms associated with its successful colonization of coastal ecosystems
inferredcites →https://doi.org/10.1186/1471-2164-13-s6-s21openalex-snapshot
Mathematical modeling and stability analysis of macrophage activation in left ventricular remodeling post-myocardial infarction
inferredcites →https://doi.org/10.1186/1471-2229-14-116openalex-snapshot
Transcriptomic and metabolomic analysis of copper stress acclimation in Ectocarpus siliculosus highlights signaling and tolerance mechanisms in brown algae
inferredcites →https://doi.org/10.1186/gb-2010-11-10-r106openalex-snapshot
Differential expression analysis for sequence count data
inferredcites →https://doi.org/10.1186/s12864-018-5226-4openalex-snapshot
Copper-induced increased expression of genes involved in photosynthesis, carotenoid synthesis and C assimilation in the marine alga Ulva compressa
inferredcites →https://doi.org/10.1186/s12864-020-6507-2openalex-snapshot
Transcriptomic profiles of Dunaliella salina in response to hypersaline stress
inferredcites →https://doi.org/10.1186/s12870-019-2229-5openalex-snapshot
Copper-induced concomitant increases in photosynthesis, respiration, and C, N and S assimilation revealed by transcriptomic analyses in Ulva compressa (Chlorophyta)
inferredcites →https://doi.org/10.1186/s12870-020-02683-yopenalex-snapshot
Genome-wide characterization and expression analysis of the heat shock transcription factor family in pumpkin (Cucurbita moschata)
inferredcites →https://doi.org/10.1261/rna.074922.120openalex-snapshot
Misuse of RPKM or TPM normalization when comparing across samples and sequencing protocols
inferredcites →https://doi.org/10.1371/journal.pone.0108912openalex-snapshot
Global Transcriptional Profiles of the Copper Responses in the Cyanobacterium Synechocystis sp. PCC 6803
inferredcites →https://doi.org/10.1371/journal.pone.0203612openalex-snapshot
Copper-caused oxidative stress triggers the activation of antioxidant enzymes via ZmMPK3 in maize leaves
inferredcites →https://doi.org/10.2174/1568026617666170102125648openalex-snapshot
Oxidative Stress and Antioxidant Potential of One Hundred Medicinal Plants
inferredcites →https://doi.org/10.2210/pdb6ijo/pdbopenalex-snapshot
Photosystem I of Chlamydomonas reinhardtii
inferredcites →https://doi.org/10.3389/fpls.2015.01250openalex-snapshot
Copper Delivery to Chloroplast Proteins and its Regulation
inferredcites →https://doi.org/10.3389/fpls.2020.00990openalex-snapshot
Copper-Induced Activation of MAPKs, CDPKs and CaMKs Triggers Activation of Hexokinase and Inhibition of Pyruvate Kinase Leading to Increased Synthesis of ASC, GSH and NADPH in Ulva compressa
inferredcites →https://doi.org/10.3390/plants9060681openalex-snapshot
Mechanisms of Copper Tolerance, Accumulation, and Detoxification in the Marine Macroalga Ulva compressa (Chlorophyta): 20 Years of Research

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Effects of Copper Exposure on the Metabolism of Tetraselmis Suecica
inferred← citeshttps://doi.org/10.1007/s10126-025-10543-9openalex-snapshot
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inferred← citeshttps://doi.org/10.1007/s10311-023-01609-yopenalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.biortech.2024.130528openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.biortech.2024.130677openalex-snapshot
A modified cultivation strategy to enhance biomass production and lipid accumulation of Tetradesmus obliquus FACHB-14 with copper stress and light quality induction
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inferred← citeshttps://doi.org/10.1016/j.envres.2023.115392openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.jece.2026.121210openalex-snapshot
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inferred← citeshttps://doi.org/10.1016/j.scitotenv.2022.155985openalex-snapshot
Effects of modified clay on the formation of Phaeocystis globosa colony revealed by physiological and transcriptomic analyses
inferred← citeshttps://doi.org/10.1016/j.watres.2023.119792openalex-snapshot
Geographic characteristics and environmental variables determine the diversities and assembly of the algal communities in interconnected river-lake system
inferred← citeshttps://doi.org/10.1021/acs.jafc.4c04075openalex-snapshot
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inferred← citeshttps://doi.org/10.1021/acssuschemeng.3c04955openalex-snapshot
Effect of DACH-K2CO3 Mixed Absorbent on the Performance of a CO2 Absorption and Microalgae Conversion (CAMC) System
inferred← citeshttps://doi.org/10.1021/jasms.4c00426openalex-snapshot
Mechanism of Copper Stress on Algae Determined Using Mass Spectrometry Molecular Network: Molecular Characteristics and Metabolite Identification
inferred← citeshttps://doi.org/10.1038/s41598-026-46884-1openalex-snapshot
Transcriptomic and physiological analysis of Dunaliella salina under sistan deep water in Iran
inferred← citeshttps://doi.org/10.3389/fmicb.2024.1374275openalex-snapshot
Toxicity, physiological response, and biosorption mechanism of Dunaliella salina to copper, lead, and cadmium
inferred← citeshttps://doi.org/10.3390/jof12020105openalex-snapshot
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Identification of a Green Algal Strain Collected from the Sarno River Mouth (Gulf of Naples, Italy) and Its Exploitation for Heavy Metal Remediation
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